RNA–Protein interactions for RNA: ENST00000463370.5

VAPB-203, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 2,393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-203ENST00000463370 TNPO2O14787 897 aaKnown RBP13.64□□□□□ -0.23
VAPB-203ENST00000463370 MMP8P22894 467 aa13.64□□□□□ -0.23
VAPB-203ENST00000463370 RPL7AP62424 266 aaKnown RBP13.64□□□□□ -0.23
VAPB-203ENST00000463370 ADAM17P78536 824 aa13.64□□□□□ -0.23
VAPB-203ENST00000463370 ZNF667Q5HYK9 610 aa13.64□□□□□ -0.23
VAPB-203ENST00000463370 PLEKHA7Q6IQ23 1121 aa13.64□□□□□ -0.23
VAPB-203ENST00000463370 PRELID2Q8N945 189 aa13.64□□□□□ -0.23
VAPB-203ENST00000463370 TRPV1Q8NER1 839 aa13.64□□□□□ -0.23
VAPB-203ENST00000463370 CCDC102AQ96A19 550 aa13.64□□□□□ -0.23
VAPB-203ENST00000463370 ZMAT2Q96NC0 199 aaKnown RBP13.64□□□□□ -0.23
VAPB-203ENST00000463370 ACAP3Q96P50 834 aa13.64□□□□□ -0.23
VAPB-203ENST00000463370 TRIM51Q9BSJ1 452 aa13.64□□□□□ -0.23
VAPB-203ENST00000463370 ASB7Q9H672 318 aa13.64□□□□□ -0.23
VAPB-203ENST00000463370 VIPAS39Q9H9C1 493 aa13.64□□□□□ -0.23
VAPB-203ENST00000463370 SNTG2Q9NY99 539 aa13.64□□□□□ -0.23
VAPB-203ENST00000463370 TJP2Q9UDY2 1190 aa13.64□□□□□ -0.23
VAPB-203ENST00000463370 ZSWIM8A7E2V4 1837 aa13.63□□□□□ -0.23
VAPB-203ENST00000463370 MGAMO43451 1857 aa13.63□□□□□ -0.23
VAPB-203ENST00000463370 CCDC66A2RUB6 948 aa13.63□□□□□ -0.23
VAPB-203ENST00000463370 SYF2O95926 243 aaKnown RBP13.63□□□□□ -0.23
VAPB-203ENST00000463370 RGS2P41220 211 aa13.63□□□□□ -0.23
VAPB-203ENST00000463370 PSEN2P49810 448 aa13.63□□□□□ -0.23
VAPB-203ENST00000463370 TMEM132DQ14C87 1099 aa13.63□□□□□ -0.23
VAPB-203ENST00000463370 DENND1BQ6P3S1 775 aa13.63□□□□□ -0.23
VAPB-203ENST00000463370 C18orf8Q96DM3 657 aa13.63□□□□□ -0.23
VAPB-203ENST00000463370 TRIM11Q96F44 468 aa13.63□□□□□ -0.23
VAPB-203ENST00000463370 APBA2Q99767 749 aa13.63□□□□□ -0.23
VAPB-203ENST00000463370 HERPUD2Q9BSE4 406 aa13.63□□□□□ -0.23
VAPB-203ENST00000463370 CYTH4Q9UIA0 394 aa13.63□□□□□ -0.23
VAPB-203ENST00000463370 AGAP1Q9UPQ3 857 aa13.63□□□□□ -0.23
VAPB-203ENST00000463370 PASKQ96RG2 1323 aa13.63□□□□□ -0.23
VAPB-203ENST00000463370 MYO1FO00160 1098 aa13.63□□□□□ -0.23
VAPB-203ENST00000463370 HAS3O00219 553 aa13.63□□□□□ -0.23
VAPB-203ENST00000463370 TCF4P15884 667 aa13.63□□□□□ -0.23
VAPB-203ENST00000463370 GGCXP38435 758 aa13.63□□□□□ -0.23
VAPB-203ENST00000463370 RAD23BP54727 409 aa13.63□□□□□ -0.23
VAPB-203ENST00000463370 C1QBPQ07021 282 aaKnown RBP13.63□□□□□ -0.23
VAPB-203ENST00000463370 SIX1Q15475 284 aaPredicted RBP13.63□□□□□ -0.23
VAPB-203ENST00000463370 TTC27Q6P3X3 843 aa13.63□□□□□ -0.23
VAPB-203ENST00000463370 EMBQ6PCB8 327 aa13.63□□□□□ -0.23
VAPB-203ENST00000463370 CATSPER4Q7RTX7 472 aa13.63□□□□□ -0.23
VAPB-203ENST00000463370 CAVIN3Q969G5 261 aa13.63□□□□□ -0.23
VAPB-203ENST00000463370 SLITRK6Q9H5Y7 841 aa13.63□□□□□ -0.23
VAPB-203ENST00000463370 ANK1P16157 1881 aa13.62□□□□□ -0.23
VAPB-203ENST00000463370 SMIM35A0A1B0GVV1 85 aa13.62□□□□□ -0.23
VAPB-203ENST00000463370 PPEF2O14830 753 aa13.62□□□□□ -0.23
VAPB-203ENST00000463370 DAPK3O43293 454 aa13.62□□□□□ -0.23
VAPB-203ENST00000463370 PROSCO94903 275 aa13.62□□□□□ -0.23
VAPB-203ENST00000463370 CD19P15391 556 aa13.62□□□□□ -0.23
VAPB-203ENST00000463370 GRM5P41594 1212 aa13.62□□□□□ -0.23
VAPB-203ENST00000463370 RWDD2BP57060 319 aa13.62□□□□□ -0.23
VAPB-203ENST00000463370 TAS2R40P59535 323 aa13.62□□□□□ -0.23
VAPB-203ENST00000463370 FAM193AP78312 1265 aa13.62□□□□□ -0.23
VAPB-203ENST00000463370 PAK2Q13177 524 aa13.62□□□□□ -0.23
VAPB-203ENST00000463370 CYP4A22Q5TCH4 519 aa13.62□□□□□ -0.23
VAPB-203ENST00000463370 LIN9Q5TKA1 542 aa13.62□□□□□ -0.23
VAPB-203ENST00000463370 KIF12Q96FN5 646 aa13.62□□□□□ -0.23
VAPB-203ENST00000463370 HPDLQ96IR7 371 aa13.62□□□□□ -0.23
VAPB-203ENST00000463370 ADPGKQ9BRR6 497 aa13.62□□□□□ -0.23
VAPB-203ENST00000463370 GCOM2Q9BZD3 368 aaPredicted RBP13.62□□□□□ -0.23
VAPB-203ENST00000463370 ELOVL4Q9GZR5 314 aa13.62□□□□□ -0.23
VAPB-203ENST00000463370 ZFYVE28Q9HCC9 887 aa13.62□□□□□ -0.23
VAPB-203ENST00000463370 TCRBV5S1A1TA0A578 114 aa13.61□□□□□ -0.23
VAPB-203ENST00000463370 TLR3O15455 904 aaKnown RBP13.61□□□□□ -0.23
VAPB-203ENST00000463370 DARSP14868 501 aaKnown RBP13.61□□□□□ -0.23
VAPB-203ENST00000463370 AARSP49588 968 aaKnown RBP eCLIP13.61□□□□□ -0.23
VAPB-203ENST00000463370 LACTBP83111 547 aaPredicted RBP13.61□□□□□ -0.23
VAPB-203ENST00000463370 ZNF252P-AS1Q0IIN9 211 aa13.61□□□□□ -0.23
VAPB-203ENST00000463370 TERF2Q15554 542 aa13.61□□□□□ -0.23
VAPB-203ENST00000463370 GLRA4Q5JXX5 417 aa13.61□□□□□ -0.23
VAPB-203ENST00000463370 SEL1L2Q5TEA6 688 aa13.61□□□□□ -0.23
VAPB-203ENST00000463370 SLC13A5Q86YT5 568 aaPredicted RBP13.61□□□□□ -0.23
VAPB-203ENST00000463370 SLC4A11Q8NBS3 891 aa13.61□□□□□ -0.23
VAPB-203ENST00000463370 DDX27Q96GQ7 796 aaKnown RBP13.61□□□□□ -0.23
VAPB-203ENST00000463370 VCPIP1Q96JH7 1222 aa13.61□□□□□ -0.23
VAPB-203ENST00000463370 TRIM31Q9BZY9 425 aa13.61□□□□□ -0.23
VAPB-203ENST00000463370 DPH5Q9H2P9 285 aa13.61□□□□□ -0.23
VAPB-203ENST00000463370 NXF3Q9H4D5 531 aaKnown RBP13.61□□□□□ -0.23
VAPB-203ENST00000463370 DPP3Q9NY33 737 aa13.61□□□□□ -0.23
VAPB-203ENST00000463370 FAN1Q9Y2M0 1017 aa13.61□□□□□ -0.23
VAPB-203ENST00000463370 CILPO75339 1184 aa13.61□□□□□ -0.23
VAPB-203ENST00000463370 RARAP10276 462 aa13.61□□□□□ -0.23
VAPB-203ENST00000463370 FLT3P36888 993 aa13.61□□□□□ -0.23
VAPB-203ENST00000463370 CPT1AP50416 773 aa13.61□□□□□ -0.23
VAPB-203ENST00000463370 CAP1Q01518 475 aa13.61□□□□□ -0.23
VAPB-203ENST00000463370 OGDHQ02218 1023 aa13.61□□□□□ -0.23
VAPB-203ENST00000463370 FSCN1Q16658 493 aaKnown RBP13.61□□□□□ -0.23
VAPB-203ENST00000463370 ANKS1BQ7Z6G8 1248 aa13.61□□□□□ -0.23
VAPB-203ENST00000463370 NAP1L3Q99457 506 aaPredicted RBP13.61□□□□□ -0.23
VAPB-203ENST00000463370 TUBGCP4Q9UGJ1 667 aa13.61□□□□□ -0.23
VAPB-203ENST00000463370 PCDHGC3Q9UN70 934 aa13.61□□□□□ -0.23
VAPB-203ENST00000463370 USTQ9Y2C2 406 aa13.61□□□□□ -0.23
VAPB-203ENST00000463370 C2CD2Q9Y426 696 aa13.61□□□□□ -0.23
VAPB-203ENST00000463370 LSM8O95777 96 aaKnown RBP13.6□□□□□ -0.23
VAPB-203ENST00000463370 AKAP5P24588 427 aa13.6□□□□□ -0.23
VAPB-203ENST00000463370 CDH5P33151 784 aaPredicted RBP13.6□□□□□ -0.23
VAPB-203ENST00000463370 PURAQ00577 322 aaKnown RBP13.6□□□□□ -0.23
VAPB-203ENST00000463370 DR1Q01658 176 aa13.6□□□□□ -0.23
VAPB-203ENST00000463370 IRF5Q13568 498 aa13.6□□□□□ -0.23
VAPB-203ENST00000463370 HLTFQ14527 1009 aaKnown RBP eCLIP13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms