RNA–Protein interactions for RNA: ENST00000463020.1

SND1-203, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 2

Gene SND1, Length 793 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-203ENST00000463020 PXNP49023 591 aaPredicted RBP17.1■□□□□ 0.33
SND1-203ENST00000463020 NEK4P51957 841 aa17.1■□□□□ 0.33
SND1-203ENST00000463020 DMP1Q13316 513 aaPredicted RBP17.1■□□□□ 0.33
SND1-203ENST00000463020 BECN1Q14457 450 aa17.1■□□□□ 0.33
SND1-203ENST00000463020 PON2Q15165 354 aa17.1■□□□□ 0.33
SND1-203ENST00000463020 SF3A2Q15428 464 aaKnown RBP17.1■□□□□ 0.33
SND1-203ENST00000463020 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.1■□□□□ 0.33
SND1-203ENST00000463020 ARID3BQ8IVW6 561 aaPredicted RBP17.1■□□□□ 0.33
SND1-203ENST00000463020 CCDC83Q8IWF9 413 aa17.1■□□□□ 0.33
SND1-203ENST00000463020 ATAD1Q8NBU5 361 aa17.1■□□□□ 0.33
SND1-203ENST00000463020 CHFRQ96EP1 664 aa17.1■□□□□ 0.33
SND1-203ENST00000463020 IER2Q9BTL4 223 aa17.1■□□□□ 0.33
SND1-203ENST00000463020 PCDHB6Q9Y5E3 794 aa17.1■□□□□ 0.33
SND1-203ENST00000463020 CNOT1A5YKK6 2376 aaKnown RBP17.09■□□□□ 0.33
SND1-203ENST00000463020 NPHP3-ACAD11A0A0J9YXS1 232 aa17.09■□□□□ 0.33
SND1-203ENST00000463020 CHADO15335 359 aa17.09■□□□□ 0.33
SND1-203ENST00000463020 EXTL3O43909 919 aa17.09■□□□□ 0.33
SND1-203ENST00000463020 OAZ2O95190 189 aa17.09■□□□□ 0.33
SND1-203ENST00000463020 PAPSS2O95340 614 aaPredicted RBP17.09■□□□□ 0.33
SND1-203ENST00000463020 KCNA4P22459 653 aa17.09■□□□□ 0.33
SND1-203ENST00000463020 AARSP49588 968 aaKnown RBP eCLIP17.09■□□□□ 0.33
SND1-203ENST00000463020 KPNA1P52294 538 aaPredicted RBP17.09■□□□□ 0.33
SND1-203ENST00000463020 CACNB1Q02641 598 aaPredicted RBP17.09■□□□□ 0.33
SND1-203ENST00000463020 CCINQ13939 588 aa17.09■□□□□ 0.33
SND1-203ENST00000463020 NOLC1Q14978 699 aaKnown RBP eCLIP17.09■□□□□ 0.33
SND1-203ENST00000463020 ZBTB6Q15916 424 aa17.09■□□□□ 0.33
SND1-203ENST00000463020 APBB1IPQ7Z5R6 666 aaPredicted RBP17.09■□□□□ 0.33
SND1-203ENST00000463020 LONP2Q86WA8 852 aa17.09■□□□□ 0.33
SND1-203ENST00000463020 TMEM161BQ8NDZ6 487 aa17.09■□□□□ 0.33
SND1-203ENST00000463020 APPL2Q8NEU8 664 aa17.09■□□□□ 0.33
SND1-203ENST00000463020 C8orf76Q96K31 380 aa17.09■□□□□ 0.33
SND1-203ENST00000463020 FOXP1Q9H334 677 aaPredicted RBP17.09■□□□□ 0.33
SND1-203ENST00000463020 SMOC1Q9H4F8 434 aa17.09■□□□□ 0.33
SND1-203ENST00000463020 TSC2P49815 1807 aa17.09■□□□□ 0.33
SND1-203ENST00000463020 KIF26AQ9ULI4 1882 aaPredicted RBP17.08■□□□□ 0.33
SND1-203ENST00000463020 MTMR11A4FU01 709 aa17.08■□□□□ 0.32
SND1-203ENST00000463020 LRP3O75074 770 aa17.08■□□□□ 0.32
SND1-203ENST00000463020 MAPTP10636 758 aaKnown RBP17.08■□□□□ 0.32
SND1-203ENST00000463020 CYP4F8P98187 520 aa17.08■□□□□ 0.32
SND1-203ENST00000463020 YWHAHQ04917 246 aaPredicted RBP17.08■□□□□ 0.32
SND1-203ENST00000463020 ORC2Q13416 577 aaPredicted RBP17.08■□□□□ 0.32
SND1-203ENST00000463020 SAFBQ15424 915 aaKnown RBP eCLIP17.08■□□□□ 0.32
SND1-203ENST00000463020 CENPPQ6IPU0 288 aa17.08■□□□□ 0.32
SND1-203ENST00000463020 CSGALNACT1Q8TDX6 532 aa17.08■□□□□ 0.32
SND1-203ENST00000463020 PNMA5Q96PV4 448 aa17.08■□□□□ 0.32
SND1-203ENST00000463020 LPIN3Q9BQK8 851 aa17.08■□□□□ 0.32
SND1-203ENST00000463020 SDK1Q7Z5N4 2213 aa17.08■□□□□ 0.32
SND1-203ENST00000463020 TTC26A0AVF1 554 aa17.07■□□□□ 0.32
SND1-203ENST00000463020 OTOL1A6NHN0 477 aaPredicted RBP17.07■□□□□ 0.32
SND1-203ENST00000463020 FAM189A1O60320 539 aa17.07■□□□□ 0.32
SND1-203ENST00000463020 TOM1L1O75674 476 aa17.07■□□□□ 0.32
SND1-203ENST00000463020 SEC24BO95487 1268 aa17.07■□□□□ 0.32
SND1-203ENST00000463020 LRPAP1P30533 357 aa17.07■□□□□ 0.32
SND1-203ENST00000463020 MLLT6P55198 1093 aaPredicted RBP17.07■□□□□ 0.32
SND1-203ENST00000463020 MCL1Q07820 350 aa17.07■□□□□ 0.32
SND1-203ENST00000463020 GPR17Q13304 367 aa17.07■□□□□ 0.32
SND1-203ENST00000463020 PPP2R5DQ14738 602 aa17.07■□□□□ 0.32
SND1-203ENST00000463020 NAIF1Q69YI7 327 aaPredicted RBP17.07■□□□□ 0.32
SND1-203ENST00000463020 YAF2Q8IY57 180 aa17.07■□□□□ 0.32
SND1-203ENST00000463020 LEMD2Q8NC56 503 aa17.07■□□□□ 0.32
SND1-203ENST00000463020 FBXO18Q8NFZ0 1043 aa17.07■□□□□ 0.32
SND1-203ENST00000463020 OR10T2Q8NGX3 314 aa17.07■□□□□ 0.32
SND1-203ENST00000463020 RIN3Q8TB24 985 aa17.07■□□□□ 0.32
SND1-203ENST00000463020 KIF12Q96FN5 646 aa17.07■□□□□ 0.32
SND1-203ENST00000463020 PLIN2Q99541 437 aa17.07■□□□□ 0.32
SND1-203ENST00000463020 MAFFQ9ULX9 164 aa17.07■□□□□ 0.32
SND1-203ENST00000463020 NUP210Q8TEM1 1887 aaPredicted RBP17.06■□□□□ 0.32
SND1-203ENST00000463020 LACTBL1A8MY62 500 aa17.06■□□□□ 0.32
SND1-203ENST00000463020 AXIN1O15169 862 aa17.06■□□□□ 0.32
SND1-203ENST00000463020 ATF6P18850 670 aa17.06■□□□□ 0.32
SND1-203ENST00000463020 MARCKSP29966 332 aaPredicted RBP17.06■□□□□ 0.32
SND1-203ENST00000463020 LRRC32Q14392 662 aa17.06■□□□□ 0.32
SND1-203ENST00000463020 PDIA5Q14554 519 aa17.06■□□□□ 0.32
SND1-203ENST00000463020 GPR158Q5T848 1215 aa17.06■□□□□ 0.32
SND1-203ENST00000463020 N4BP2L1Q5TBK1 243 aaPredicted RBP17.06■□□□□ 0.32
SND1-203ENST00000463020 DNAJB7Q7Z6W7 309 aaPredicted RBP17.06■□□□□ 0.32
SND1-203ENST00000463020 WDR5BQ86VZ2 330 aa17.06■□□□□ 0.32
SND1-203ENST00000463020 LRRC15Q8TF66 581 aa17.06■□□□□ 0.32
SND1-203ENST00000463020 DRC1Q96MC2 740 aa17.06■□□□□ 0.32
SND1-203ENST00000463020 NTPCRQ9BSD7 190 aaKnown RBP17.06■□□□□ 0.32
SND1-203ENST00000463020 ARRDC1-AS1Q9H2J1 176 aa17.06■□□□□ 0.32
SND1-203ENST00000463020 ATXN3LQ9H3M9 355 aa17.06■□□□□ 0.32
SND1-203ENST00000463020 C8orf33Q9H7E9 229 aaPredicted RBP17.06■□□□□ 0.32
SND1-203ENST00000463020 IL21Q9HBE4 155 aa17.06■□□□□ 0.32
SND1-203ENST00000463020 DNM3Q9UQ16 869 aa17.06■□□□□ 0.32
SND1-203ENST00000463020 TM4SF5O14894 197 aa17.05■□□□□ 0.32
SND1-203ENST00000463020 PLS3P13797 630 aa17.05■□□□□ 0.32
SND1-203ENST00000463020 GUCY2CP25092 1073 aa17.05■□□□□ 0.32
SND1-203ENST00000463020 GABRR2P28476 465 aa17.05■□□□□ 0.32
SND1-203ENST00000463020 EPHB3P54753 998 aa17.05■□□□□ 0.32
SND1-203ENST00000463020 ENOX2Q16206 610 aaKnown RBP17.05■□□□□ 0.32
SND1-203ENST00000463020 KBTBD6Q86V97 674 aa17.05■□□□□ 0.32
SND1-203ENST00000463020 RALGPS2Q86X27 583 aaPredicted RBP17.05■□□□□ 0.32
SND1-203ENST00000463020 STKLD1Q8NE28 680 aa17.05■□□□□ 0.32
SND1-203ENST00000463020 SPIRE2Q8WWL2 714 aa17.05■□□□□ 0.32
SND1-203ENST00000463020 PSMG2Q969U7 264 aa17.05■□□□□ 0.32
SND1-203ENST00000463020 CCL26Q9Y258 94 aa17.05■□□□□ 0.32
SND1-203ENST00000463020 RALGAPA1Q6GYQ0 2036 aa17.04■□□□□ 0.32
SND1-203ENST00000463020 ANK1P16157 1881 aa17.04■□□□□ 0.32
SND1-203ENST00000463020 PMLP29590 882 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms