RNA–Protein interactions for RNA: ENST00000462899.1

SMC3-202, Transcript of structural maintenance of chromosomes 3, humanhuman

TSL 5

Gene SMC3, Length 777 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3-202ENST00000462899 PDZD4Q76G19 769 aaPredicted RBP8.5□□□□□ -1.05
SMC3-202ENST00000462899 CACNA2D4Q7Z3S7 1137 aa8.5□□□□□ -1.05
SMC3-202ENST00000462899 RALGPS2Q86X27 583 aaPredicted RBP8.5□□□□□ -1.05
SMC3-202ENST00000462899 SYNPOQ8N3V7 929 aa8.5□□□□□ -1.05
SMC3-202ENST00000462899 C12orf50Q8NA57 414 aaPredicted RBP8.5□□□□□ -1.05
SMC3-202ENST00000462899 BEST2Q8NFU1 509 aa8.5□□□□□ -1.05
SMC3-202ENST00000462899 SHKBP1Q8TBC3 707 aa8.5□□□□□ -1.05
SMC3-202ENST00000462899 ZSCAN18Q8TBC5 510 aaPredicted RBP8.5□□□□□ -1.05
SMC3-202ENST00000462899 TCEAL3Q969E4 200 aa8.5□□□□□ -1.05
SMC3-202ENST00000462899 AIFM3Q96NN9 605 aa8.5□□□□□ -1.05
SMC3-202ENST00000462899 FAM117AQ9C073 453 aa8.5□□□□□ -1.05
SMC3-202ENST00000462899 POLR3FQ9H1D9 316 aaPredicted RBP8.5□□□□□ -1.05
SMC3-202ENST00000462899 GOLGA2P5Q9HBQ8 144 aa8.5□□□□□ -1.05
SMC3-202ENST00000462899 NCOA5Q9HCD5 579 aaKnown RBP8.5□□□□□ -1.05
SMC3-202ENST00000462899 ANKEF1Q9NU02 776 aa8.5□□□□□ -1.05
SMC3-202ENST00000462899 HELZP42694 1942 aaKnown RBP8.5□□□□□ -1.05
SMC3-202ENST00000462899 CEP192Q8TEP8 1941 aa8.5□□□□□ -1.05
SMC3-202ENST00000462899 PLXNB3Q9ULL4 1909 aa8.5□□□□□ -1.05
SMC3-202ENST00000462899 CFAP46Q8IYW2 2715 aa8.5□□□□□ -1.05
SMC3-202ENST00000462899 ACACAQ13085 2346 aa8.49□□□□□ -1.05
SMC3-202ENST00000462899 ANAPC1Q9H1A4 1944 aa8.49□□□□□ -1.05
SMC3-202ENST00000462899 ADAMTS9Q9P2N4 1935 aa8.49□□□□□ -1.05
SMC3-202ENST00000462899 TENM4Q6N022 2769 aa8.49□□□□□ -1.05
SMC3-202ENST00000462899 RPP40O75818 363 aaKnown RBP8.49□□□□□ -1.05
SMC3-202ENST00000462899 B3GAT3O94766 335 aa8.49□□□□□ -1.05
SMC3-202ENST00000462899 CAPNS1P04632 268 aa8.49□□□□□ -1.05
SMC3-202ENST00000462899 PRKCBP05771 671 aa8.49□□□□□ -1.05
SMC3-202ENST00000462899 GCFC2P16383 781 aaKnown RBP8.49□□□□□ -1.05
SMC3-202ENST00000462899 GJA1P17302 382 aa8.49□□□□□ -1.05
SMC3-202ENST00000462899 SPINK2P20155 84 aa8.49□□□□□ -1.05
SMC3-202ENST00000462899 PDIA3P30101 505 aaKnown RBP8.49□□□□□ -1.05
SMC3-202ENST00000462899 NOVA1P51513 510 aaKnown RBP8.49□□□□□ -1.05
SMC3-202ENST00000462899 AKAP17AQ02040 695 aaKnown RBP8.49□□□□□ -1.05
SMC3-202ENST00000462899 RING1Q06587 406 aa8.49□□□□□ -1.05
SMC3-202ENST00000462899 ZNF252P-AS1Q0IIN9 211 aa8.49□□□□□ -1.05
SMC3-202ENST00000462899 TEAD2Q15562 447 aa8.49□□□□□ -1.05
SMC3-202ENST00000462899 PLK5Q496M5 336 aa8.49□□□□□ -1.05
SMC3-202ENST00000462899 GLRA4Q5JXX5 417 aa8.49□□□□□ -1.05
SMC3-202ENST00000462899 TPGS2Q68CL5 300 aa8.49□□□□□ -1.05
SMC3-202ENST00000462899 NCAPH2Q6IBW4 605 aa8.49□□□□□ -1.05
SMC3-202ENST00000462899 ALKAL1Q6UXT8 129 aa8.49□□□□□ -1.05
SMC3-202ENST00000462899 CEP68Q76N32 757 aa8.49□□□□□ -1.05
SMC3-202ENST00000462899 KRT25Q7Z3Z0 450 aa8.49□□□□□ -1.05
SMC3-202ENST00000462899 NEK8Q86SG6 692 aa8.49□□□□□ -1.05
SMC3-202ENST00000462899 NOSTRINQ8IVI9 506 aa8.49□□□□□ -1.05
SMC3-202ENST00000462899 LEMD2Q8NC56 503 aa8.49□□□□□ -1.05
SMC3-202ENST00000462899 BSNDQ8WZ55 320 aa8.49□□□□□ -1.05
SMC3-202ENST00000462899 E2F7Q96AV8 911 aa8.49□□□□□ -1.05
SMC3-202ENST00000462899 UROC1Q96N76 676 aa8.49□□□□□ -1.05
SMC3-202ENST00000462899 EIF2AK1Q9BQI3 630 aaKnown RBP8.49□□□□□ -1.05
SMC3-202ENST00000462899 DUSP15Q9H1R2 295 aaPredicted RBP8.49□□□□□ -1.05
SMC3-202ENST00000462899 DNAJC25Q9H1X3 360 aa8.49□□□□□ -1.05
SMC3-202ENST00000462899 CYP4F11Q9HBI6 524 aa8.49□□□□□ -1.05
SMC3-202ENST00000462899 GPRC5CQ9NQ84 441 aa8.49□□□□□ -1.05
SMC3-202ENST00000462899 VPS45Q9NRW7 570 aa8.49□□□□□ -1.05
SMC3-202ENST00000462899 FBXL5Q9UKA1 691 aa8.49□□□□□ -1.05
SMC3-202ENST00000462899 NAP1L2Q9ULW6 460 aaPredicted RBP8.49□□□□□ -1.05
SMC3-202ENST00000462899 MYH11P35749 1972 aa8.49□□□□□ -1.05
SMC3-202ENST00000462899 PCDH15Q96QU1 1955 aa8.49□□□□□ -1.05
SMC3-202ENST00000462899 APC2O95996 2303 aa8.49□□□□□ -1.05
SMC3-202ENST00000462899 GON4LQ3T8J9 2241 aa8.48□□□□□ -1.05
SMC3-202ENST00000462899 LNP1A1A4G5 178 aa8.48□□□□□ -1.05
SMC3-202ENST00000462899 PRRG1O14668 218 aa8.48□□□□□ -1.05
SMC3-202ENST00000462899 SYN3O14994 580 aa8.48□□□□□ -1.05
SMC3-202ENST00000462899 MEFVO15553 781 aaPredicted RBP8.48□□□□□ -1.05
SMC3-202ENST00000462899 DEXIO95424 95 aa8.48□□□□□ -1.05
SMC3-202ENST00000462899 RPS6KB1P23443 525 aa8.48□□□□□ -1.05
SMC3-202ENST00000462899 WEE1P30291 646 aa8.48□□□□□ -1.05
SMC3-202ENST00000462899 TWF1Q12792 350 aa8.48□□□□□ -1.05
SMC3-202ENST00000462899 PON2Q15165 354 aa8.48□□□□□ -1.05
SMC3-202ENST00000462899 EARS2Q5JPH6 523 aaKnown RBP8.48□□□□□ -1.05
SMC3-202ENST00000462899 STXBP5Q5T5C0 1151 aa8.48□□□□□ -1.05
SMC3-202ENST00000462899 CYP4A22Q5TCH4 519 aa8.48□□□□□ -1.05
SMC3-202ENST00000462899 RNF43Q68DV7 783 aa8.48□□□□□ -1.05
SMC3-202ENST00000462899 TPH2Q8IWU9 490 aa8.48□□□□□ -1.05
SMC3-202ENST00000462899 EDEM2Q9BV94 578 aa8.48□□□□□ -1.05
SMC3-202ENST00000462899 GPR88Q9GZN0 384 aa8.48□□□□□ -1.05
SMC3-202ENST00000462899 ASAH2Q9NR71 780 aa8.48□□□□□ -1.05
SMC3-202ENST00000462899 OBP2AQ9NY56 170 aa8.48□□□□□ -1.05
SMC3-202ENST00000462899 GTSE1Q9NYZ3 720 aa8.48□□□□□ -1.05
SMC3-202ENST00000462899 AFF4Q9UHB7 1163 aaKnown RBP8.48□□□□□ -1.05
SMC3-202ENST00000462899 MAFFQ9ULX9 164 aa8.48□□□□□ -1.05
SMC3-202ENST00000462899 USP20Q9Y2K6 914 aa8.48□□□□□ -1.05
SMC3-202ENST00000462899 SMIM28A0A1B0GU29 152 aa8.47□□□□□ -1.05
SMC3-202ENST00000462899 LRRIQ4A6NIV6 560 aa8.47□□□□□ -1.05
SMC3-202ENST00000462899 ACKR2O00590 384 aa8.47□□□□□ -1.05
SMC3-202ENST00000462899 CDX4O14627 284 aaPredicted RBP8.47□□□□□ -1.05
SMC3-202ENST00000462899 TRAPPC3O43617 180 aa8.47□□□□□ -1.05
SMC3-202ENST00000462899 CCNT1O60563 726 aaKnown RBP8.47□□□□□ -1.05
SMC3-202ENST00000462899 USO1O60763 962 aaKnown RBP8.47□□□□□ -1.05
SMC3-202ENST00000462899 S1PR4O95977 384 aa8.47□□□□□ -1.05
SMC3-202ENST00000462899 CSRP1P21291 193 aaKnown RBP8.47□□□□□ -1.05
SMC3-202ENST00000462899 ELF1P32519 619 aa8.47□□□□□ -1.05
SMC3-202ENST00000462899 PXNP49023 591 aaPredicted RBP8.47□□□□□ -1.05
SMC3-202ENST00000462899 USP46P62068 366 aa8.47□□□□□ -1.05
SMC3-202ENST00000462899 CCT2P78371 535 aaKnown RBP8.47□□□□□ -1.05
SMC3-202ENST00000462899 FOXC1Q12948 553 aa8.47□□□□□ -1.05
SMC3-202ENST00000462899 PRPF4BQ13523 1007 aaKnown RBP8.47□□□□□ -1.05
SMC3-202ENST00000462899 TOB2Q14106 344 aaPredicted RBP8.47□□□□□ -1.05
SMC3-202ENST00000462899 DCAF4L1Q3SXM0 396 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms