RNA–Protein interactions for RNA: ENST00000462658.1

UBE4B-204, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-204ENST00000462658 RBM28Q9NW13 759 aaKnown RBP8.39□□□□□ -1.07
UBE4B-204ENST00000462658 MTMR4Q9NYA4 1195 aa8.39□□□□□ -1.07
UBE4B-204ENST00000462658 GPRC5DQ9NZD1 345 aa8.39□□□□□ -1.07
UBE4B-204ENST00000462658 HERC5Q9UII4 1024 aaKnown RBP8.39□□□□□ -1.07
UBE4B-204ENST00000462658 PLIN4Q96Q06 1357 aa8.38□□□□□ -1.07
UBE4B-204ENST00000462658 IGKV6D-41A0A0C4DH26 115 aa8.38□□□□□ -1.07
UBE4B-204ENST00000462658 A0A1B0GTL3 188 aa8.38□□□□□ -1.07
UBE4B-204ENST00000462658 ZNF839A8K0R7 811 aa8.38□□□□□ -1.07
UBE4B-204ENST00000462658 BAG4O95429 457 aaKnown RBP8.38□□□□□ -1.07
UBE4B-204ENST00000462658 ENO2P09104 434 aaPredicted RBP8.38□□□□□ -1.07
UBE4B-204ENST00000462658 TOP1P11387 765 aaKnown RBP8.38□□□□□ -1.07
UBE4B-204ENST00000462658 CNGA1P29973 690 aa8.38□□□□□ -1.07
UBE4B-204ENST00000462658 KIF5BP33176 963 aa8.38□□□□□ -1.07
UBE4B-204ENST00000462658 EPS15P42566 896 aa8.38□□□□□ -1.07
UBE4B-204ENST00000462658 GLRBP48167 497 aa8.38□□□□□ -1.07
UBE4B-204ENST00000462658 NOVP48745 357 aa8.38□□□□□ -1.07
UBE4B-204ENST00000462658 AFF3P51826 1226 aaKnown RBP8.38□□□□□ -1.07
UBE4B-204ENST00000462658 DLX2Q07687 328 aaPredicted RBP8.38□□□□□ -1.07
UBE4B-204ENST00000462658 STRN3Q13033 797 aa8.38□□□□□ -1.07
UBE4B-204ENST00000462658 TNFAIP1Q13829 316 aa8.38□□□□□ -1.07
UBE4B-204ENST00000462658 SKIDA1Q1XH10 827 aa8.38□□□□□ -1.07
UBE4B-204ENST00000462658 VWA3BQ502W6 1294 aa8.38□□□□□ -1.07
UBE4B-204ENST00000462658 DTX3Q8N9I9 347 aa8.38□□□□□ -1.07
UBE4B-204ENST00000462658 SMC1BQ8NDV3 1235 aa8.38□□□□□ -1.07
UBE4B-204ENST00000462658 ERCC4Q92889 916 aaPredicted RBP8.38□□□□□ -1.07
UBE4B-204ENST00000462658 TMEM209Q96SK2 561 aa8.38□□□□□ -1.07
UBE4B-204ENST00000462658 SLC26A6Q9BXS9 759 aa8.38□□□□□ -1.07
UBE4B-204ENST00000462658 PCIF1Q9H4Z3 704 aa8.38□□□□□ -1.07
UBE4B-204ENST00000462658 PCDH18Q9HCL0 1135 aa8.38□□□□□ -1.07
UBE4B-204ENST00000462658 ARHGAP28Q9P2N2 729 aa8.38□□□□□ -1.07
UBE4B-204ENST00000462658 CLIP2Q9UDT6 1046 aa8.38□□□□□ -1.07
UBE4B-204ENST00000462658 HACL1Q9UJ83 578 aa8.38□□□□□ -1.07
UBE4B-204ENST00000462658 CROTQ9UKG9 612 aa8.38□□□□□ -1.07
UBE4B-204ENST00000462658 ECM29Q5VYK3 1845 aa8.38□□□□□ -1.07
UBE4B-204ENST00000462658 ASTN2O75129 1339 aaPredicted RBP8.37□□□□□ -1.07
UBE4B-204ENST00000462658 STK36Q9NRP7 1315 aa8.37□□□□□ -1.07
UBE4B-204ENST00000462658 DNAJC6O75061 913 aa8.37□□□□□ -1.07
UBE4B-204ENST00000462658 PLEKHA8P1O95397 391 aa8.37□□□□□ -1.07
UBE4B-204ENST00000462658 TTLL1O95922 423 aa8.37□□□□□ -1.07
UBE4B-204ENST00000462658 PTX3P26022 381 aaPredicted RBP8.37□□□□□ -1.07
UBE4B-204ENST00000462658 CFPP27918 469 aa8.37□□□□□ -1.07
UBE4B-204ENST00000462658 AOAHP28039 575 aa8.37□□□□□ -1.07
UBE4B-204ENST00000462658 SOX5P35711 763 aa8.37□□□□□ -1.07
UBE4B-204ENST00000462658 IL2P60568 153 aa8.37□□□□□ -1.07
UBE4B-204ENST00000462658 AKAP17AQ02040 695 aaKnown RBP8.37□□□□□ -1.07
UBE4B-204ENST00000462658 ZNF174Q15697 407 aa8.37□□□□□ -1.07
UBE4B-204ENST00000462658 ABCB5Q2M3G0 1257 aa8.37□□□□□ -1.07
UBE4B-204ENST00000462658 CT47A1Q5JQC4 288 aaPredicted RBP8.37□□□□□ -1.07
UBE4B-204ENST00000462658 RNF187Q5TA31 235 aaPredicted RBP8.37□□□□□ -1.07
UBE4B-204ENST00000462658 CC2D1AQ6P1N0 951 aaPredicted RBP8.37□□□□□ -1.07
UBE4B-204ENST00000462658 TMEM179Q6ZVK1 233 aa8.37□□□□□ -1.07
UBE4B-204ENST00000462658 TMTC3Q6ZXV5 915 aa8.37□□□□□ -1.07
UBE4B-204ENST00000462658 KRT26Q7Z3Y9 468 aa8.37□□□□□ -1.07
UBE4B-204ENST00000462658 ASB15Q8WXK1 588 aa8.37□□□□□ -1.07
UBE4B-204ENST00000462658 WASF1Q92558 559 aa8.37□□□□□ -1.07
UBE4B-204ENST00000462658 C8orf76Q96K31 380 aa8.37□□□□□ -1.07
UBE4B-204ENST00000462658 ELF4Q99607 663 aaPredicted RBP8.37□□□□□ -1.07
UBE4B-204ENST00000462658 SPC25Q9HBM1 224 aa8.37□□□□□ -1.07
UBE4B-204ENST00000462658 SPTLC3Q9NUV7 552 aa8.37□□□□□ -1.07
UBE4B-204ENST00000462658 BTBD7Q9P203 1132 aa8.37□□□□□ -1.07
UBE4B-204ENST00000462658 PGAP2Q9UHJ9 254 aa8.37□□□□□ -1.07
UBE4B-204ENST00000462658 ATP6V1DQ9Y5K8 247 aa8.37□□□□□ -1.07
UBE4B-204ENST00000462658 GOLGA6L22H0YM25 854 aa8.36□□□□□ -1.07
UBE4B-204ENST00000462658 FFAR3O14843 346 aa8.36□□□□□ -1.07
UBE4B-204ENST00000462658 PRPF3O43395 683 aaKnown RBP8.36□□□□□ -1.07
UBE4B-204ENST00000462658 DEXIO95424 95 aa8.36□□□□□ -1.07
UBE4B-204ENST00000462658 SDHAP31040 664 aa8.36□□□□□ -1.07
UBE4B-204ENST00000462658 ADCYAP1R1P41586 468 aa8.36□□□□□ -1.07
UBE4B-204ENST00000462658 ID4P47928 161 aa8.36□□□□□ -1.07
UBE4B-204ENST00000462658 GNAQP50148 359 aa8.36□□□□□ -1.07
UBE4B-204ENST00000462658 HERVK_113P62684 666 aa8.36□□□□□ -1.07
UBE4B-204ENST00000462658 GUCY1B3Q02153 619 aa8.36□□□□□ -1.07
UBE4B-204ENST00000462658 RRP1BQ14684 758 aaKnown RBP8.36□□□□□ -1.07
UBE4B-204ENST00000462658 GRM4Q14833 912 aa8.36□□□□□ -1.07
UBE4B-204ENST00000462658 SEPT2Q15019 361 aa8.36□□□□□ -1.07
UBE4B-204ENST00000462658 OTUD7BQ6GQQ9 843 aa8.36□□□□□ -1.07
UBE4B-204ENST00000462658 MIGA2Q7L4E1 593 aa8.36□□□□□ -1.07
UBE4B-204ENST00000462658 SAPCD2Q86UD0 394 aa8.36□□□□□ -1.07
UBE4B-204ENST00000462658 FERMT3Q86UX7 667 aa8.36□□□□□ -1.07
UBE4B-204ENST00000462658 LRRC56Q8IYG6 542 aaPredicted RBP8.36□□□□□ -1.07
UBE4B-204ENST00000462658 SRBD1Q8N5C6 995 aaKnown RBP8.36□□□□□ -1.07
UBE4B-204ENST00000462658 FBXO18Q8NFZ0 1043 aa8.36□□□□□ -1.07
UBE4B-204ENST00000462658 CLIC6Q96NY7 704 aa8.36□□□□□ -1.07
UBE4B-204ENST00000462658 LZTS2Q9BRK4 669 aa8.36□□□□□ -1.07
UBE4B-204ENST00000462658 RNF26Q9BY78 433 aaPredicted RBP8.36□□□□□ -1.07
UBE4B-204ENST00000462658 DEFB129Q9H1M3 183 aa8.36□□□□□ -1.07
UBE4B-204ENST00000462658 ZSCAN16Q9H4T2 348 aaPredicted RBP8.36□□□□□ -1.07
UBE4B-204ENST00000462658 DLL4Q9NR61 685 aa8.36□□□□□ -1.07
UBE4B-204ENST00000462658 UCKL1Q9NWZ5 548 aa8.36□□□□□ -1.07
UBE4B-204ENST00000462658 NYAP2Q9P242 653 aa8.36□□□□□ -1.07
UBE4B-204ENST00000462658 MAD2L2Q9UI95 211 aa8.36□□□□□ -1.07
UBE4B-204ENST00000462658 SCAF8Q9UPN6 1271 aaKnown RBP8.36□□□□□ -1.07
UBE4B-204ENST00000462658 POLR2AP24928 1970 aaKnown RBP8.35□□□□□ -1.07
UBE4B-204ENST00000462658 DBX1A6NMT0 343 aa8.35□□□□□ -1.07
UBE4B-204ENST00000462658 UBE2Q2LH0YL09 131 aa8.35□□□□□ -1.07
UBE4B-204ENST00000462658 GH2P01242 217 aa8.35□□□□□ -1.07
UBE4B-204ENST00000462658 PARP1P09874 1014 aaKnown RBP8.35□□□□□ -1.07
UBE4B-204ENST00000462658 EEF2P13639 858 aaKnown RBP8.35□□□□□ -1.07
UBE4B-204ENST00000462658 PTMSP20962 102 aa8.35□□□□□ -1.07
UBE4B-204ENST00000462658 GUCY1A2P33402 732 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms