RNA–Protein interactions for RNA: ENST00000462475.1

COL7A1-204, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 3

Gene COL7A1, Length 305 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-204ENST00000462475 JADE1Q6IE81 842 aa17.48■□□□□ 0.39
COL7A1-204ENST00000462475 TTC9BQ8N6N2 239 aa17.48■□□□□ 0.39
COL7A1-204ENST00000462475 ZBTB44Q8NCP5 570 aa17.48■□□□□ 0.39
COL7A1-204ENST00000462475 DEPDC1BQ8WUY9 529 aa17.48■□□□□ 0.39
COL7A1-204ENST00000462475 RAD54LQ92698 747 aa17.48■□□□□ 0.39
COL7A1-204ENST00000462475 NELL1Q92832 810 aa17.48■□□□□ 0.39
COL7A1-204ENST00000462475 RSPRY1Q96DX4 576 aa17.48■□□□□ 0.39
COL7A1-204ENST00000462475 FAM212AQ96EL1 285 aa17.48■□□□□ 0.39
COL7A1-204ENST00000462475 OXCT2Q9BYC2 517 aaPredicted RBP17.48■□□□□ 0.39
COL7A1-204ENST00000462475 ZHX3Q9H4I2 956 aa17.48■□□□□ 0.39
COL7A1-204ENST00000462475 ZSCAN32Q9NX65 697 aa17.48■□□□□ 0.39
COL7A1-204ENST00000462475 CPSF3Q9UKF6 684 aaKnown RBP17.48■□□□□ 0.39
COL7A1-204ENST00000462475 SMC3Q9UQE7 1217 aa17.48■□□□□ 0.39
COL7A1-204ENST00000462475 SLC27A5Q9Y2P5 690 aa17.48■□□□□ 0.39
COL7A1-204ENST00000462475 PIAS3Q9Y6X2 628 aa17.48■□□□□ 0.39
COL7A1-204ENST00000462475 CEP250Q9BV73 2442 aa17.48■□□□□ 0.39
COL7A1-204ENST00000462475 F5P12259 2224 aa17.47■□□□□ 0.39
COL7A1-204ENST00000462475 HEPACAM2A8MVW5 462 aa17.47■□□□□ 0.39
COL7A1-204ENST00000462475 TISP43B9A030 160 aa17.47■□□□□ 0.39
COL7A1-204ENST00000462475 ARNTLO00327 626 aa17.47■□□□□ 0.39
COL7A1-204ENST00000462475 MAN2B1O00754 1011 aa17.47■□□□□ 0.39
COL7A1-204ENST00000462475 SOAT2O75908 522 aa17.47■□□□□ 0.39
COL7A1-204ENST00000462475 KRT18P05783 430 aaKnown RBP17.47■□□□□ 0.39
COL7A1-204ENST00000462475 TYMPP19971 482 aa17.47■□□□□ 0.39
COL7A1-204ENST00000462475 NMT1P30419 496 aaKnown RBP17.47■□□□□ 0.39
COL7A1-204ENST00000462475 LILRA4P59901 499 aa17.47■□□□□ 0.39
COL7A1-204ENST00000462475 PLD1Q13393 1074 aa17.47■□□□□ 0.39
COL7A1-204ENST00000462475 STXBP5Q5T5C0 1151 aa17.47■□□□□ 0.39
COL7A1-204ENST00000462475 CENPPQ6IPU0 288 aa17.47■□□□□ 0.39
COL7A1-204ENST00000462475 ATAD1Q8NBU5 361 aa17.47■□□□□ 0.39
COL7A1-204ENST00000462475 ATRIPQ8WXE1 791 aa17.47■□□□□ 0.39
COL7A1-204ENST00000462475 SENP8Q96LD8 212 aa17.47■□□□□ 0.39
COL7A1-204ENST00000462475 CHRDQ9H2X0 955 aa17.47■□□□□ 0.39
COL7A1-204ENST00000462475 TRPV5Q9NQA5 729 aa17.47■□□□□ 0.39
COL7A1-204ENST00000462475 ANKRD63C9JTQ0 380 aa17.46■□□□□ 0.39
COL7A1-204ENST00000462475 ZNF263O14978 683 aa17.46■□□□□ 0.39
COL7A1-204ENST00000462475 LILRB5O75023 590 aa17.46■□□□□ 0.39
COL7A1-204ENST00000462475 TBCAO75347 108 aaKnown RBP17.46■□□□□ 0.39
COL7A1-204ENST00000462475 ODC1P11926 461 aa17.46■□□□□ 0.39
COL7A1-204ENST00000462475 SCP2P22307 547 aa17.46■□□□□ 0.39
COL7A1-204ENST00000462475 EPHB3P54753 998 aa17.46■□□□□ 0.39
COL7A1-204ENST00000462475 GTF2BQ00403 316 aa17.46■□□□□ 0.39
COL7A1-204ENST00000462475 MYBPC2Q14324 1141 aa17.46■□□□□ 0.39
COL7A1-204ENST00000462475 C9orf57Q5W0N0 161 aa17.46■□□□□ 0.39
COL7A1-204ENST00000462475 LARP1BQ659C4 914 aaKnown RBP17.46■□□□□ 0.39
COL7A1-204ENST00000462475 MFSD6LQ8IWD5 586 aa17.46■□□□□ 0.39
COL7A1-204ENST00000462475 OR10T2Q8NGX3 314 aa17.46■□□□□ 0.39
COL7A1-204ENST00000462475 RASSF8Q8NHQ8 419 aa17.46■□□□□ 0.39
COL7A1-204ENST00000462475 FAM3CQ92520 227 aa17.46■□□□□ 0.39
COL7A1-204ENST00000462475 TSPAN18Q96SJ8 248 aa17.46■□□□□ 0.39
COL7A1-204ENST00000462475 EPC1Q9H2F5 836 aa17.46■□□□□ 0.39
COL7A1-204ENST00000462475 NCDNQ9UBB6 729 aa17.46■□□□□ 0.39
COL7A1-204ENST00000462475 SMG5Q9UPR3 1016 aaKnown RBP17.46■□□□□ 0.39
COL7A1-204ENST00000462475 BMP15O95972 392 aa17.45■□□□□ 0.38
COL7A1-204ENST00000462475 TDGF1P13385 188 aa17.45■□□□□ 0.38
COL7A1-204ENST00000462475 LONP1P36776 959 aaKnown RBP17.45■□□□□ 0.38
COL7A1-204ENST00000462475 ALDH1A3P47895 512 aa17.45■□□□□ 0.38
COL7A1-204ENST00000462475 ACOT2P49753 483 aa17.45■□□□□ 0.38
COL7A1-204ENST00000462475 CDR1P51861 262 aa17.45■□□□□ 0.38
COL7A1-204ENST00000462475 TMEM132DQ14C87 1099 aa17.45■□□□□ 0.38
COL7A1-204ENST00000462475 SF3A1Q15459 793 aaKnown RBP17.45■□□□□ 0.38
COL7A1-204ENST00000462475 ZC2HC1CQ53FD0 456 aaPredicted RBP17.45■□□□□ 0.38
COL7A1-204ENST00000462475 GPIHBP1Q8IV16 184 aa17.45■□□□□ 0.38
COL7A1-204ENST00000462475 CD302Q8IX05 232 aa17.45■□□□□ 0.38
COL7A1-204ENST00000462475 LARP4BQ92615 738 aaKnown RBP17.45■□□□□ 0.38
COL7A1-204ENST00000462475 MKNK1Q9BUB5 465 aa17.45■□□□□ 0.38
COL7A1-204ENST00000462475 GPR88Q9GZN0 384 aa17.45■□□□□ 0.38
COL7A1-204ENST00000462475 IKZF4Q9H2S9 585 aa17.45■□□□□ 0.38
COL7A1-204ENST00000462475 TSC2P49815 1807 aa17.44■□□□□ 0.38
COL7A1-204ENST00000462475 ANO9A1A5B4 782 aa17.44■□□□□ 0.38
COL7A1-204ENST00000462475 PIRO00625 290 aa17.44■□□□□ 0.38
COL7A1-204ENST00000462475 CCNE1P24864 410 aa17.44■□□□□ 0.38
COL7A1-204ENST00000462475 ARMCX5Q6P1M9 558 aa17.44■□□□□ 0.38
COL7A1-204ENST00000462475 USP49Q70CQ1 688 aa17.44■□□□□ 0.38
COL7A1-204ENST00000462475 GAREM2Q75VX8 874 aa17.44■□□□□ 0.38
COL7A1-204ENST00000462475 BRAPQ7Z569 592 aa17.44■□□□□ 0.38
COL7A1-204ENST00000462475 DNAJB7Q7Z6W7 309 aaPredicted RBP17.44■□□□□ 0.38
COL7A1-204ENST00000462475 PSMG2Q969U7 264 aa17.44■□□□□ 0.38
COL7A1-204ENST00000462475 BORCS6Q96GS4 357 aa17.44■□□□□ 0.38
COL7A1-204ENST00000462475 LMAN1LQ9HAT1 526 aa17.44■□□□□ 0.38
COL7A1-204ENST00000462475 DERAQ9Y315 318 aa17.44■□□□□ 0.38
COL7A1-204ENST00000462475 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.44■□□□□ 0.38
COL7A1-204ENST00000462475 TICRRQ7Z2Z1 1910 aa17.44■□□□□ 0.38
COL7A1-204ENST00000462475 MED19A0JLT2 244 aaPredicted RBP17.43■□□□□ 0.38
COL7A1-204ENST00000462475 SLC38A8A6NNN8 435 aa17.43■□□□□ 0.38
COL7A1-204ENST00000462475 CYP11A1P05108 521 aa17.43■□□□□ 0.38
COL7A1-204ENST00000462475 CHRNB1P11230 501 aa17.43■□□□□ 0.38
COL7A1-204ENST00000462475 SOX9P48436 509 aa17.43■□□□□ 0.38
COL7A1-204ENST00000462475 MCM2P49736 904 aa17.43■□□□□ 0.38
COL7A1-204ENST00000462475 FCHO2Q0JRZ9 810 aa17.43■□□□□ 0.38
COL7A1-204ENST00000462475 GAS6Q14393 721 aa17.43■□□□□ 0.38
COL7A1-204ENST00000462475 SLC39A12Q504Y0 691 aa17.43■□□□□ 0.38
COL7A1-204ENST00000462475 ADALQ6DHV7 355 aa17.43■□□□□ 0.38
COL7A1-204ENST00000462475 DGLUCYQ7Z3D6 616 aa17.43■□□□□ 0.38
COL7A1-204ENST00000462475 ARID3BQ8IVW6 561 aaPredicted RBP17.43■□□□□ 0.38
COL7A1-204ENST00000462475 YAF2Q8IY57 180 aa17.43■□□□□ 0.38
COL7A1-204ENST00000462475 E2F7Q96AV8 911 aa17.43■□□□□ 0.38
COL7A1-204ENST00000462475 LRRC3BQ96PB8 259 aa17.43■□□□□ 0.38
COL7A1-204ENST00000462475 LPIN3Q9BQK8 851 aa17.43■□□□□ 0.38
COL7A1-204ENST00000462475 ATXN3LQ9H3M9 355 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms