RNA–Protein interactions for RNA: ENST00000461654.1

TMEM39A-203, Transcript of transmembrane protein 39A, humanhuman

TSL 4

Gene TMEM39A, Length 588 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-203ENST00000461654 DPY19L2P1Q6NXN4 242 aa16.29■□□□□ 0.2
TMEM39A-203ENST00000461654 GJB7Q6PEY0 223 aa16.29■□□□□ 0.2
TMEM39A-203ENST00000461654 MRPL10Q7Z7H8 261 aaKnown RBP16.29■□□□□ 0.2
TMEM39A-203ENST00000461654 KLHL23Q8NBE8 558 aa16.29■□□□□ 0.2
TMEM39A-203ENST00000461654 RNF169Q8NCN4 708 aa16.29■□□□□ 0.2
TMEM39A-203ENST00000461654 RSPH1Q8WYR4 309 aa16.29■□□□□ 0.2
TMEM39A-203ENST00000461654 PI4K2AQ9BTU6 479 aa16.29■□□□□ 0.2
TMEM39A-203ENST00000461654 ALG13Q9NP73 1137 aaKnown RBP16.29■□□□□ 0.2
TMEM39A-203ENST00000461654 RNF19AQ9NV58 838 aa16.29■□□□□ 0.2
TMEM39A-203ENST00000461654 KLK14Q9P0G3 267 aa16.29■□□□□ 0.2
TMEM39A-203ENST00000461654 GIT1Q9Y2X7 761 aa16.29■□□□□ 0.2
TMEM39A-203ENST00000461654 BZW2Q9Y6E2 419 aaKnown RBP16.29■□□□□ 0.2
TMEM39A-203ENST00000461654 REV3LO60673 3130 aa16.29■□□□□ 0.2
TMEM39A-203ENST00000461654 TBKBP1A7MCY6 615 aa16.28■□□□□ 0.2
TMEM39A-203ENST00000461654 F8VZ95 297 aa16.28■□□□□ 0.2
TMEM39A-203ENST00000461654 OFD1O75665 1012 aa16.28■□□□□ 0.2
TMEM39A-203ENST00000461654 IPO7O95373 1038 aaKnown RBP16.28■□□□□ 0.2
TMEM39A-203ENST00000461654 ITGB3P05106 788 aa16.28■□□□□ 0.2
TMEM39A-203ENST00000461654 SERPING1P05155 500 aa16.28■□□□□ 0.2
TMEM39A-203ENST00000461654 FGFR1P11362 822 aa16.28■□□□□ 0.2
TMEM39A-203ENST00000461654 P4HA1P13674 534 aa16.28■□□□□ 0.2
TMEM39A-203ENST00000461654 FECHP22830 423 aa16.28■□□□□ 0.2
TMEM39A-203ENST00000461654 CYLC1P35663 651 aaPredicted RBP16.28■□□□□ 0.2
TMEM39A-203ENST00000461654 SOX5P35711 763 aa16.28■□□□□ 0.2
TMEM39A-203ENST00000461654 MYL6P60660 151 aa16.28■□□□□ 0.2
TMEM39A-203ENST00000461654 NOP14P78316 857 aaKnown RBP16.28■□□□□ 0.2
TMEM39A-203ENST00000461654 MEA1Q16626 185 aa16.28■□□□□ 0.2
TMEM39A-203ENST00000461654 CTC1Q2NKJ3 1217 aa16.28■□□□□ 0.2
TMEM39A-203ENST00000461654 ZNF699Q32M78 642 aa16.28■□□□□ 0.2
TMEM39A-203ENST00000461654 TDRD12Q587J7 1177 aaKnown RBP16.28■□□□□ 0.2
TMEM39A-203ENST00000461654 ALKAL1Q6UXT8 129 aa16.28■□□□□ 0.2
TMEM39A-203ENST00000461654 ZNF598Q86UK7 904 aaKnown RBP16.28■□□□□ 0.2
TMEM39A-203ENST00000461654 ARHGEF19Q8IW93 802 aa16.28■□□□□ 0.2
TMEM39A-203ENST00000461654 JAKMIP2Q96AA8 810 aa16.28■□□□□ 0.2
TMEM39A-203ENST00000461654 FAM84AQ96KN4 292 aa16.28■□□□□ 0.2
TMEM39A-203ENST00000461654 CCDC42Q96M95 316 aa16.28■□□□□ 0.2
TMEM39A-203ENST00000461654 CASD1Q96PB1 797 aa16.28■□□□□ 0.2
TMEM39A-203ENST00000461654 RNF39Q9H2S5 420 aa16.28■□□□□ 0.2
TMEM39A-203ENST00000461654 DEF6Q9H4E7 631 aa16.28■□□□□ 0.2
TMEM39A-203ENST00000461654 CWH43Q9H720 699 aa16.28■□□□□ 0.2
TMEM39A-203ENST00000461654 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.28■□□□□ 0.2
TMEM39A-203ENST00000461654 SLC38A7Q9NVC3 462 aa16.28■□□□□ 0.2
TMEM39A-203ENST00000461654 AIPL1Q9NZN9 384 aa16.28■□□□□ 0.2
TMEM39A-203ENST00000461654 PCDHB12Q9Y5F1 795 aa16.28■□□□□ 0.2
TMEM39A-203ENST00000461654 SMIM28A0A1B0GU29 152 aa16.27■□□□□ 0.2
TMEM39A-203ENST00000461654 MEFVO15553 781 aaPredicted RBP16.27■□□□□ 0.2
TMEM39A-203ENST00000461654 CCP110O43303 1012 aa16.27■□□□□ 0.2
TMEM39A-203ENST00000461654 ASS1P00966 412 aaKnown RBP16.27■□□□□ 0.2
TMEM39A-203ENST00000461654 CST3P01034 146 aaPredicted RBP16.27■□□□□ 0.2
TMEM39A-203ENST00000461654 ATF7P17544 494 aaPredicted RBP16.27■□□□□ 0.2
TMEM39A-203ENST00000461654 IBSPP21815 317 aaPredicted RBP16.27■□□□□ 0.2
TMEM39A-203ENST00000461654 KCNA5P22460 613 aa16.27■□□□□ 0.2
TMEM39A-203ENST00000461654 DNAJB1P25685 340 aa16.27■□□□□ 0.2
TMEM39A-203ENST00000461654 USP8P40818 1118 aa16.27■□□□□ 0.2
TMEM39A-203ENST00000461654 JAM2P57087 298 aa16.27■□□□□ 0.2
TMEM39A-203ENST00000461654 YWHAEP62258 255 aaKnown RBP16.27■□□□□ 0.2
TMEM39A-203ENST00000461654 ARID5AQ03989 594 aa16.27■□□□□ 0.2
TMEM39A-203ENST00000461654 KLHL30Q0D2K2 578 aa16.27■□□□□ 0.2
TMEM39A-203ENST00000461654 MYO1EQ12965 1108 aa16.27■□□□□ 0.2
TMEM39A-203ENST00000461654 XKR4Q5GH76 650 aa16.27■□□□□ 0.2
TMEM39A-203ENST00000461654 ZNF667Q5HYK9 610 aa16.27■□□□□ 0.2
TMEM39A-203ENST00000461654 VPS36Q86VN1 386 aa16.27■□□□□ 0.2
TMEM39A-203ENST00000461654 TMEM139Q8IV31 216 aa16.27■□□□□ 0.2
TMEM39A-203ENST00000461654 CCDC170Q8IYT3 715 aa16.27■□□□□ 0.2
TMEM39A-203ENST00000461654 C1orf127Q8N9H9 656 aa16.27■□□□□ 0.2
TMEM39A-203ENST00000461654 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.27■□□□□ 0.2
TMEM39A-203ENST00000461654 POF1BQ8WVV4 589 aa16.27■□□□□ 0.2
TMEM39A-203ENST00000461654 AGAP1Q9UPQ3 857 aa16.27■□□□□ 0.2
TMEM39A-203ENST00000461654 GFPT2O94808 682 aa16.26■□□□□ 0.19
TMEM39A-203ENST00000461654 LAG3P18627 525 aa16.26■□□□□ 0.19
TMEM39A-203ENST00000461654 CYP3A5P20815 502 aa16.26■□□□□ 0.19
TMEM39A-203ENST00000461654 POLR2BP30876 1174 aaKnown RBP16.26■□□□□ 0.19
TMEM39A-203ENST00000461654 PLCB3Q01970 1234 aa16.26■□□□□ 0.19
TMEM39A-203ENST00000461654 HYAL1Q12794 435 aa16.26■□□□□ 0.19
TMEM39A-203ENST00000461654 CUL2Q13617 745 aa16.26■□□□□ 0.19
TMEM39A-203ENST00000461654 GLRA4Q5JXX5 417 aa16.26■□□□□ 0.19
TMEM39A-203ENST00000461654 SMYD5Q6GMV2 418 aa16.26■□□□□ 0.19
TMEM39A-203ENST00000461654 WDR59Q6PJI9 974 aa16.26■□□□□ 0.19
TMEM39A-203ENST00000461654 HELQQ8TDG4 1101 aa16.26■□□□□ 0.19
TMEM39A-203ENST00000461654 TATDN2Q93075 761 aa16.26■□□□□ 0.19
TMEM39A-203ENST00000461654 FAXDC2Q96IV6 333 aa16.26■□□□□ 0.19
TMEM39A-203ENST00000461654 NIF3L1Q9GZT8 377 aa16.26■□□□□ 0.19
TMEM39A-203ENST00000461654 RSAD1Q9HA92 442 aa16.26■□□□□ 0.19
TMEM39A-203ENST00000461654 XIRP2A4UGR9 3374 aa16.26■□□□□ 0.19
TMEM39A-203ENST00000461654 SPTBN5Q9NRC6 3674 aaKnown RBP16.25■□□□□ 0.19
TMEM39A-203ENST00000461654 FNDC1Q4ZHG4 1894 aaPredicted RBP16.25■□□□□ 0.19
TMEM39A-203ENST00000461654 SOWAHDA6NJG2 315 aa16.25■□□□□ 0.19
TMEM39A-203ENST00000461654 ESPNB1AK53 854 aa16.25■□□□□ 0.19
TMEM39A-203ENST00000461654 ZSCAN12O43309 604 aa16.25■□□□□ 0.19
TMEM39A-203ENST00000461654 AKR1B10O60218 316 aa16.25■□□□□ 0.19
TMEM39A-203ENST00000461654 LRRN2O75325 713 aa16.25■□□□□ 0.19
TMEM39A-203ENST00000461654 THP07101 528 aa16.25■□□□□ 0.19
TMEM39A-203ENST00000461654 KRT5P13647 590 aa16.25■□□□□ 0.19
TMEM39A-203ENST00000461654 LTBRP36941 435 aa16.25■□□□□ 0.19
TMEM39A-203ENST00000461654 MLH1P40692 756 aa16.25■□□□□ 0.19
TMEM39A-203ENST00000461654 PNPLA4P41247 253 aa16.25■□□□□ 0.19
TMEM39A-203ENST00000461654 ZBTB6Q15916 424 aa16.25■□□□□ 0.19
TMEM39A-203ENST00000461654 SPOUT1Q5T280 376 aaKnown RBP16.25■□□□□ 0.19
TMEM39A-203ENST00000461654 SPOPLQ6IQ16 392 aa16.25■□□□□ 0.19
TMEM39A-203ENST00000461654 PDE12Q6L8Q7 609 aaKnown RBP16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms