RNA–Protein interactions for RNA: ENST00000460573.5

C9orf3-209, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 443 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-209ENST00000460573 C11orf57Q6ZUT1 292 aaPredicted RBP24.16■■□□□ 1.46
C9orf3-209ENST00000460573 RIN2Q8WYP3 895 aaPredicted RBP24.16■■□□□ 1.46
C9orf3-209ENST00000460573 FAM84AQ96KN4 292 aa24.16■■□□□ 1.46
C9orf3-209ENST00000460573 FUCA2Q9BTY2 467 aa24.16■■□□□ 1.46
C9orf3-209ENST00000460573 DNAJC25Q9H1X3 360 aa24.16■■□□□ 1.46
C9orf3-209ENST00000460573 TLE6Q9H808 572 aa24.16■■□□□ 1.46
C9orf3-209ENST00000460573 RXFP1Q9HBX9 757 aa24.16■■□□□ 1.46
C9orf3-209ENST00000460573 GDAP2Q9NXN4 497 aa24.16■■□□□ 1.46
C9orf3-209ENST00000460573 FNIP2Q9P278 1114 aa24.16■■□□□ 1.46
C9orf3-209ENST00000460573 DSEQ9UL01 958 aa24.16■■□□□ 1.46
C9orf3-209ENST00000460573 HIDE1A8MVS5 230 aa24.15■■□□□ 1.46
C9orf3-209ENST00000460573 H7C4K7 107 aa24.15■■□□□ 1.46
C9orf3-209ENST00000460573 I3L4J1 428 aa24.15■■□□□ 1.46
C9orf3-209ENST00000460573 TKTP29401 623 aaKnown RBP24.15■■□□□ 1.46
C9orf3-209ENST00000460573 GTF2F1P35269 517 aaKnown RBP eCLIP24.15■■□□□ 1.467e-6■■■■□ 21.3
C9orf3-209ENST00000460573 GCLMP48507 274 aa24.15■■□□□ 1.46
C9orf3-209ENST00000460573 NCOA4Q13772 614 aa24.15■■□□□ 1.46
C9orf3-209ENST00000460573 ZSCAN23Q3MJ62 389 aa24.15■■□□□ 1.46
C9orf3-209ENST00000460573 TRIM59Q8IWR1 403 aa24.15■■□□□ 1.46
C9orf3-209ENST00000460573 TAF4BQ92750 862 aa24.15■■□□□ 1.46
C9orf3-209ENST00000460573 BPIFA3Q9BQP9 254 aa24.15■■□□□ 1.46
C9orf3-209ENST00000460573 OXCT2Q9BYC2 517 aaPredicted RBP24.15■■□□□ 1.46
C9orf3-209ENST00000460573 VRTNQ9H8Y1 702 aa24.15■■□□□ 1.46
C9orf3-209ENST00000460573 CYB561D2O14569 222 aa24.14■■□□□ 1.45
C9orf3-209ENST00000460573 N4BP1O75113 896 aaKnown RBP24.14■■□□□ 1.45
C9orf3-209ENST00000460573 SRGAP2BP0DMP2 458 aa24.14■■□□□ 1.45
C9orf3-209ENST00000460573 COL9A1P20849 921 aa24.14■■□□□ 1.45
C9orf3-209ENST00000460573 MXI1P50539 228 aa24.14■■□□□ 1.45
C9orf3-209ENST00000460573 MYL5Q02045 173 aa24.14■■□□□ 1.45
C9orf3-209ENST00000460573 SGSM1Q2NKQ1 1148 aa24.14■■□□□ 1.45
C9orf3-209ENST00000460573 ANO6Q4KMQ2 910 aa24.14■■□□□ 1.45
C9orf3-209ENST00000460573 DPH6Q7L8W6 267 aa24.14■■□□□ 1.45
C9orf3-209ENST00000460573 LNX1Q8TBB1 728 aaPredicted RBP24.14■■□□□ 1.45
C9orf3-209ENST00000460573 AUTS2Q8WXX7 1259 aa24.14■■□□□ 1.45
C9orf3-209ENST00000460573 B3GALT6Q96L58 329 aa24.14■■□□□ 1.45
C9orf3-209ENST00000460573 CNOT6LQ96LI5 555 aaKnown RBP24.14■■□□□ 1.45
C9orf3-209ENST00000460573 MAGEC2Q9UBF1 373 aaPredicted RBP24.14■■□□□ 1.45
C9orf3-209ENST00000460573 CD207Q9UJ71 328 aa24.14■■□□□ 1.45
C9orf3-209ENST00000460573 NFE2L3Q9Y4A8 694 aa24.14■■□□□ 1.45
C9orf3-209ENST00000460573 UTP18Q9Y5J1 556 aaKnown RBP eCLIP24.14■■□□□ 1.45
C9orf3-209ENST00000460573 BACE2Q9Y5Z0 518 aa24.14■■□□□ 1.45
C9orf3-209ENST00000460573 C2CD2LO14523 706 aa24.13■■□□□ 1.45
C9orf3-209ENST00000460573 PMM2O15305 246 aa24.13■■□□□ 1.45
C9orf3-209ENST00000460573 VNN1O95497 513 aa24.13■■□□□ 1.45
C9orf3-209ENST00000460573 CAVIN2O95810 425 aa24.13■■□□□ 1.45
C9orf3-209ENST00000460573 C1RP00736 705 aa24.13■■□□□ 1.45
C9orf3-209ENST00000460573 CYP11A1P05108 521 aa24.13■■□□□ 1.45
C9orf3-209ENST00000460573 MYL6P60660 151 aa24.13■■□□□ 1.45
C9orf3-209ENST00000460573 MRPL58Q14197 206 aaKnown RBP24.13■■□□□ 1.45
C9orf3-209ENST00000460573 PSMD5Q16401 504 aa24.13■■□□□ 1.45
C9orf3-209ENST00000460573 VARS2Q5ST30 1063 aaKnown RBP24.13■■□□□ 1.45
C9orf3-209ENST00000460573 ADGRD2Q7Z7M1 963 aa24.13■■□□□ 1.45
C9orf3-209ENST00000460573 PPFIBP1Q86W92 1011 aa24.13■■□□□ 1.45
C9orf3-209ENST00000460573 METTL23Q86XA0 190 aa24.13■■□□□ 1.45
C9orf3-209ENST00000460573 IRF2BP1Q8IU81 584 aa24.13■■□□□ 1.45
C9orf3-209ENST00000460573 TOP6BLQ8N6T0 577 aa24.13■■□□□ 1.45
C9orf3-209ENST00000460573 SPATA18Q8TC71 538 aa24.13■■□□□ 1.45
C9orf3-209ENST00000460573 IMPG2Q9BZV3 1241 aa24.13■■□□□ 1.45
C9orf3-209ENST00000460573 PCDHGC5Q9Y5F6 944 aa24.13■■□□□ 1.45
C9orf3-209ENST00000460573 SCN1AP35498 2009 aa24.12■■□□□ 1.45
C9orf3-209ENST00000460573 P4HA2O15460 535 aa24.12■■□□□ 1.45
C9orf3-209ENST00000460573 LINC01565O15544 149 aa24.12■■□□□ 1.45
C9orf3-209ENST00000460573 HUS1O60921 280 aa24.12■■□□□ 1.45
C9orf3-209ENST00000460573 OAZ2O95190 189 aa24.12■■□□□ 1.45
C9orf3-209ENST00000460573 HLA-DRAP01903 254 aa24.12■■□□□ 1.45
C9orf3-209ENST00000460573 ADH1AP07327 375 aa24.12■■□□□ 1.45
C9orf3-209ENST00000460573 FAM163BP0C2L3 166 aa24.12■■□□□ 1.45
C9orf3-209ENST00000460573 PRKCSHP14314 528 aaPredicted RBP24.12■■□□□ 1.45
C9orf3-209ENST00000460573 PIK3CAP42336 1068 aa24.12■■□□□ 1.45
C9orf3-209ENST00000460573 YWHAHQ04917 246 aaPredicted RBP24.12■■□□□ 1.45
C9orf3-209ENST00000460573 CETN1Q12798 172 aa24.12■■□□□ 1.45
C9orf3-209ENST00000460573 DUSP6Q16828 381 aa24.12■■□□□ 1.45
C9orf3-209ENST00000460573 SCARA3Q6AZY7 606 aa24.12■■□□□ 1.45
C9orf3-209ENST00000460573 ZNF280DQ6N043 979 aa24.12■■□□□ 1.45
C9orf3-209ENST00000460573 TMEM86AQ8N2M4 240 aa24.12■■□□□ 1.45
C9orf3-209ENST00000460573 CCDC150Q8NCX0 1101 aa24.12■■□□□ 1.45
C9orf3-209ENST00000460573 FBXL13Q8NEE6 735 aa24.12■■□□□ 1.45
C9orf3-209ENST00000460573 KLHL5Q96PQ7 755 aa24.12■■□□□ 1.45
C9orf3-209ENST00000460573 XYLT2Q9H1B5 865 aa24.12■■□□□ 1.45
C9orf3-209ENST00000460573 MMRN2Q9H8L6 949 aa24.12■■□□□ 1.45
C9orf3-209ENST00000460573 MTRRQ9UBK8 725 aa24.12■■□□□ 1.45
C9orf3-209ENST00000460573 PRKAG3Q9UGI9 489 aa24.12■■□□□ 1.45
C9orf3-209ENST00000460573 COQ4Q9Y3A0 265 aa24.12■■□□□ 1.45
C9orf3-209ENST00000460573 SNX9Q9Y5X1 595 aa24.12■■□□□ 1.45
C9orf3-209ENST00000460573 CNPP09543 421 aaKnown RBP24.11■■□□□ 1.45
C9orf3-209ENST00000460573 KCNH2Q12809 1159 aa24.11■■□□□ 1.45
C9orf3-209ENST00000460573 SMAD4Q13485 552 aaKnown RBP24.11■■□□□ 1.45
C9orf3-209ENST00000460573 COL19A1Q14993 1142 aa24.11■■□□□ 1.45
C9orf3-209ENST00000460573 CTC1Q2NKJ3 1217 aa24.11■■□□□ 1.45
C9orf3-209ENST00000460573 ZNF699Q32M78 642 aa24.11■■□□□ 1.45
C9orf3-209ENST00000460573 OVOS1Q6IE37 1185 aa24.11■■□□□ 1.45
C9orf3-209ENST00000460573 PRSS55Q6UWB4 352 aaPredicted RBP24.11■■□□□ 1.45
C9orf3-209ENST00000460573 CREBRFQ8IUR6 639 aa24.11■■□□□ 1.45
C9orf3-209ENST00000460573 EFHBQ8N7U6 833 aa24.11■■□□□ 1.45
C9orf3-209ENST00000460573 EPHX3Q9H6B9 360 aa24.11■■□□□ 1.45
C9orf3-209ENST00000460573 SMTNL1A8MU46 457 aa24.1■■□□□ 1.45
C9orf3-209ENST00000460573 TEX28O15482 410 aa24.1■■□□□ 1.45
C9orf3-209ENST00000460573 TBX10O75333 385 aa24.1■■□□□ 1.45
C9orf3-209ENST00000460573 ASS1P00966 412 aaKnown RBP24.1■■□□□ 1.45
C9orf3-209ENST00000460573 P4HA1P13674 534 aa24.1■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms