RNA–Protein interactions for RNA: ENST00000460060.5

C4A-244, Transcript of complement C4A (Rodgers blood group), humanhuman

TSL 3

Gene C4A, Length 628 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4A-244ENST00000460060 PHACTR2O75167 634 aa13.72□□□□□ -0.21
C4A-244ENST00000460060 NFICP08651 508 aa13.72□□□□□ -0.21
C4A-244ENST00000460060 SLC9A1P19634 815 aa13.72□□□□□ -0.21
C4A-244ENST00000460060 KLK7P49862 253 aa13.72□□□□□ -0.21
C4A-244ENST00000460060 BIRC3Q13489 604 aa13.72□□□□□ -0.21
C4A-244ENST00000460060 TMEM132DQ14C87 1099 aa13.72□□□□□ -0.21
C4A-244ENST00000460060 TDRD10Q5VZ19 366 aaKnown RBP13.72□□□□□ -0.21
C4A-244ENST00000460060 ANKRD54Q6NXT1 300 aa13.72□□□□□ -0.21
C4A-244ENST00000460060 SYCE2Q6PIF2 218 aa13.72□□□□□ -0.21
C4A-244ENST00000460060 TRAPPC11Q7Z392 1133 aa13.72□□□□□ -0.21
C4A-244ENST00000460060 PPFIBP1Q86W92 1011 aa13.72□□□□□ -0.21
C4A-244ENST00000460060 RNF169Q8NCN4 708 aa13.72□□□□□ -0.21
C4A-244ENST00000460060 FBXL13Q8NEE6 735 aa13.72□□□□□ -0.21
C4A-244ENST00000460060 TAS1R2Q8TE23 839 aa13.72□□□□□ -0.21
C4A-244ENST00000460060 LPPQ93052 612 aa13.72□□□□□ -0.21
C4A-244ENST00000460060 KIF12Q96FN5 646 aa13.72□□□□□ -0.21
C4A-244ENST00000460060 FAM84AQ96KN4 292 aa13.72□□□□□ -0.21
C4A-244ENST00000460060 LSM14BQ9BX40 385 aaKnown RBP13.72□□□□□ -0.21
C4A-244ENST00000460060 INTS2Q9H0H0 1204 aaKnown RBP13.72□□□□□ -0.21
C4A-244ENST00000460060 IRF2BPLQ9H1B7 796 aa13.72□□□□□ -0.21
C4A-244ENST00000460060 CXCL16Q9H2A7 254 aa13.72□□□□□ -0.21
C4A-244ENST00000460060 PLCB1Q9NQ66 1216 aa13.72□□□□□ -0.21
C4A-244ENST00000460060 FAM86C1Q9NVL1 165 aa13.72□□□□□ -0.21
C4A-244ENST00000460060 GCNT4Q9P109 453 aa13.72□□□□□ -0.21
C4A-244ENST00000460060 IMPACTQ9P2X3 320 aa13.72□□□□□ -0.21
C4A-244ENST00000460060 LZTS1Q9Y250 596 aa13.72□□□□□ -0.21
C4A-244ENST00000460060 RIF1Q5UIP0 2472 aaKnown RBP13.72□□□□□ -0.21
C4A-244ENST00000460060 ZFHX2Q9C0A1 2572 aaPredicted RBP13.71□□□□□ -0.21
C4A-244ENST00000460060 SMIM28A0A1B0GU29 152 aa13.71□□□□□ -0.21
C4A-244ENST00000460060 GOLGA6L6A8MZA4 724 aa13.71□□□□□ -0.21
C4A-244ENST00000460060 GFRA3O60609 400 aa13.71□□□□□ -0.21
C4A-244ENST00000460060 LAG3P18627 525 aa13.71□□□□□ -0.21
C4A-244ENST00000460060 PON1P27169 355 aa13.71□□□□□ -0.21
C4A-244ENST00000460060 PLCB3Q01970 1234 aa13.71□□□□□ -0.21
C4A-244ENST00000460060 TBX2Q13207 712 aaPredicted RBP13.71□□□□□ -0.21
C4A-244ENST00000460060 TRIM14Q14142 442 aa13.71□□□□□ -0.21
C4A-244ENST00000460060 ZBTB6Q15916 424 aa13.71□□□□□ -0.21
C4A-244ENST00000460060 FIGNQ5HY92 759 aa13.71□□□□□ -0.21
C4A-244ENST00000460060 AGMOQ6ZNB7 445 aa13.71□□□□□ -0.21
C4A-244ENST00000460060 ZNF598Q86UK7 904 aaKnown RBP13.71□□□□□ -0.21
C4A-244ENST00000460060 NEK11Q8NG66 645 aa13.71□□□□□ -0.21
C4A-244ENST00000460060 LMO3Q8TAP4 145 aa13.71□□□□□ -0.21
C4A-244ENST00000460060 IQCDQ96DY2 449 aa13.71□□□□□ -0.21
C4A-244ENST00000460060 RIPOR3Q96MK2 946 aa13.71□□□□□ -0.21
C4A-244ENST00000460060 ZMAT2Q96NC0 199 aaKnown RBP13.71□□□□□ -0.21
C4A-244ENST00000460060 MTMR12Q9C0I1 747 aa13.71□□□□□ -0.21
C4A-244ENST00000460060 ELAC1Q9H777 363 aaKnown RBP13.71□□□□□ -0.21
C4A-244ENST00000460060 RSAD1Q9HA92 442 aa13.71□□□□□ -0.21
C4A-244ENST00000460060 FAM207AQ9NSI2 230 aaPredicted RBP13.71□□□□□ -0.21
C4A-244ENST00000460060 RAB20Q9NX57 234 aa13.71□□□□□ -0.21
C4A-244ENST00000460060 TMEM161AQ9NX61 479 aa13.71□□□□□ -0.21
C4A-244ENST00000460060 FAM186AA6NE01 2351 aa13.71□□□□□ -0.22
C4A-244ENST00000460060 MEIS3P2A8K0S8 358 aa13.7□□□□□ -0.22
C4A-244ENST00000460060 XPOTO43592 962 aaKnown RBP13.7□□□□□ -0.22
C4A-244ENST00000460060 HLA-DRAP01903 254 aa13.7□□□□□ -0.22
C4A-244ENST00000460060 TPM1P09493 284 aa13.7□□□□□ -0.22
C4A-244ENST00000460060 SRGAP2BP0DMP2 458 aa13.7□□□□□ -0.22
C4A-244ENST00000460060 FGFR1P11362 822 aa13.7□□□□□ -0.22
C4A-244ENST00000460060 TRIM21P19474 475 aaKnown RBP13.7□□□□□ -0.22
C4A-244ENST00000460060 NUBP1P53384 320 aa13.7□□□□□ -0.22
C4A-244ENST00000460060 TRPC3Q13507 836 aa13.7□□□□□ -0.22
C4A-244ENST00000460060 KLHDC7AQ5VTJ3 777 aa13.7□□□□□ -0.22
C4A-244ENST00000460060 PLPP4Q5VZY2 271 aa13.7□□□□□ -0.22
C4A-244ENST00000460060 BEST2Q8NFU1 509 aa13.7□□□□□ -0.22
C4A-244ENST00000460060 SEMA4DQ92854 862 aa13.7□□□□□ -0.22
C4A-244ENST00000460060 ATOH1Q92858 354 aaPredicted RBP13.7□□□□□ -0.22
C4A-244ENST00000460060 RPS6KC1Q96S38 1066 aa13.7□□□□□ -0.22
C4A-244ENST00000460060 GAD1Q99259 594 aa13.7□□□□□ -0.22
C4A-244ENST00000460060 APOL5Q9BWW9 433 aa13.7□□□□□ -0.22
C4A-244ENST00000460060 EDEM3Q9BZQ6 932 aa13.7□□□□□ -0.22
C4A-244ENST00000460060 DPP3Q9NY33 737 aa13.7□□□□□ -0.22
C4A-244ENST00000460060 PUF60Q9UHX1 559 aaKnown RBP13.7□□□□□ -0.22
C4A-244ENST00000460060 UBQLN1Q9UMX0 589 aaKnown RBP13.7□□□□□ -0.22
C4A-244ENST00000460060 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.7□□□□□ -0.22
C4A-244ENST00000460060 PLXNA3P51805 1871 aa13.7□□□□□ -0.22
C4A-244ENST00000460060 ARL5CA6NH57 179 aa13.69□□□□□ -0.22
C4A-244ENST00000460060 ZC3H11AO75152 810 aaKnown RBP eCLIP13.69□□□□□ -0.22
C4A-244ENST00000460060 VNN1O95497 513 aa13.69□□□□□ -0.22
C4A-244ENST00000460060 CST3P01034 146 aaPredicted RBP13.69□□□□□ -0.22
C4A-244ENST00000460060 PDGFBP01127 241 aaPredicted RBP13.69□□□□□ -0.22
C4A-244ENST00000460060 HOXB8P17481 243 aaPredicted RBP13.69□□□□□ -0.22
C4A-244ENST00000460060 MLH1P40692 756 aa13.69□□□□□ -0.22
C4A-244ENST00000460060 PIK3CAP42336 1068 aa13.69□□□□□ -0.22
C4A-244ENST00000460060 RBP5P82980 135 aa13.69□□□□□ -0.22
C4A-244ENST00000460060 NCOA4Q13772 614 aa13.69□□□□□ -0.22
C4A-244ENST00000460060 WDR44Q5JSH3 913 aa13.69□□□□□ -0.22
C4A-244ENST00000460060 GLRA4Q5JXX5 417 aa13.69□□□□□ -0.22
C4A-244ENST00000460060 DPY19L2P1Q6NXN4 242 aa13.69□□□□□ -0.22
C4A-244ENST00000460060 TRIM65Q6PJ69 517 aa13.69□□□□□ -0.22
C4A-244ENST00000460060 GLB1LQ6UWU2 654 aa13.69□□□□□ -0.22
C4A-244ENST00000460060 C1orf127Q8N9H9 656 aa13.69□□□□□ -0.22
C4A-244ENST00000460060 CCDC150Q8NCX0 1101 aa13.69□□□□□ -0.22
C4A-244ENST00000460060 ZFP42Q96MM3 310 aa13.69□□□□□ -0.22
C4A-244ENST00000460060 CASD1Q96PB1 797 aa13.69□□□□□ -0.22
C4A-244ENST00000460060 TCF25Q9BQ70 676 aa13.69□□□□□ -0.22
C4A-244ENST00000460060 SIX2Q9NPC8 291 aa13.69□□□□□ -0.22
C4A-244ENST00000460060 NGRNQ9NPE2 291 aaKnown RBP13.69□□□□□ -0.22
C4A-244ENST00000460060 RNF19AQ9NV58 838 aa13.69□□□□□ -0.22
C4A-244ENST00000460060 SLC38A7Q9NVC3 462 aa13.69□□□□□ -0.22
C4A-244ENST00000460060 ITGA11Q9UKX5 1188 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms