RNA–Protein interactions for RNA: ENST00000459997.1

SRM-202, Transcript of spermidine synthase, humanhuman

TSL 5

Gene SRM, Length 731 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRM-202ENST00000459997 KCNG4Q8TDN1 519 aa22.59■■□□□ 1.21
SRM-202ENST00000459997 ATOH1Q92858 354 aaPredicted RBP22.59■■□□□ 1.21
SRM-202ENST00000459997 TCEAL4Q96EI5 215 aa22.59■■□□□ 1.21
SRM-202ENST00000459997 RTP3Q9BQQ7 232 aa22.59■■□□□ 1.21
SRM-202ENST00000459997 TRIM9Q9C026 710 aa22.59■■□□□ 1.21
SRM-202ENST00000459997 TMEM206Q9H813 350 aa22.59■■□□□ 1.21
SRM-202ENST00000459997 TBC1D17Q9HA65 648 aa22.59■■□□□ 1.21
SRM-202ENST00000459997 CEP72Q9P209 647 aa22.59■■□□□ 1.21
SRM-202ENST00000459997 YIPF1Q9Y548 306 aa22.59■■□□□ 1.21
SRM-202ENST00000459997 ZNF197O14709 1029 aa22.58■■□□□ 1.21
SRM-202ENST00000459997 LDHAP00338 332 aaKnown RBP22.58■■□□□ 1.21
SRM-202ENST00000459997 TAF6P49848 677 aa22.58■■□□□ 1.21
SRM-202ENST00000459997 WNT7BP56706 349 aa22.58■■□□□ 1.21
SRM-202ENST00000459997 AMPD3Q01432 767 aa22.58■■□□□ 1.21
SRM-202ENST00000459997 CYP4A22Q5TCH4 519 aa22.58■■□□□ 1.21
SRM-202ENST00000459997 ARMCX5Q6P1M9 558 aa22.58■■□□□ 1.21
SRM-202ENST00000459997 STXBP4Q6ZWJ1 553 aa22.58■■□□□ 1.21
SRM-202ENST00000459997 NT5DC4Q86YG4 428 aa22.58■■□□□ 1.21
SRM-202ENST00000459997 BRSK2Q8IWQ3 736 aa22.58■■□□□ 1.21
SRM-202ENST00000459997 HS6ST3Q8IZP7 471 aa22.58■■□□□ 1.21
SRM-202ENST00000459997 NOC3LQ8WTT2 800 aaKnown RBP22.58■■□□□ 1.21
SRM-202ENST00000459997 HPS3Q969F9 1004 aa22.58■■□□□ 1.21
SRM-202ENST00000459997 TMEM209Q96SK2 561 aa22.58■■□□□ 1.21
SRM-202ENST00000459997 PYM1Q9BRP8 204 aaKnown RBP22.58■■□□□ 1.21
SRM-202ENST00000459997 CBWD1Q9BRT8 395 aa22.58■■□□□ 1.21
SRM-202ENST00000459997 PCIF1Q9H4Z3 704 aa22.58■■□□□ 1.21
SRM-202ENST00000459997 RBAKQ9NYW8 714 aaPredicted RBP22.58■■□□□ 1.21
SRM-202ENST00000459997 DSEQ9UL01 958 aa22.58■■□□□ 1.21
SRM-202ENST00000459997 SCN1AP35498 2009 aa22.57■■□□□ 1.2
SRM-202ENST00000459997 PIEZO1Q92508 2521 aa22.57■■□□□ 1.2
SRM-202ENST00000459997 GOLGA8IPA6NC78 632 aa22.57■■□□□ 1.2
SRM-202ENST00000459997 GOLGA8JA6NMD2 632 aa22.57■■□□□ 1.2
SRM-202ENST00000459997 CYB561D2O14569 222 aa22.57■■□□□ 1.2
SRM-202ENST00000459997 CYP11A1P05108 521 aa22.57■■□□□ 1.2
SRM-202ENST00000459997 CCR2P41597 374 aa22.57■■□□□ 1.2
SRM-202ENST00000459997 ME1P48163 572 aa22.57■■□□□ 1.2
SRM-202ENST00000459997 ASIC1P78348 528 aa22.57■■□□□ 1.2
SRM-202ENST00000459997 TFAMQ00059 246 aaKnown RBP22.57■■□□□ 1.2
SRM-202ENST00000459997 DUSP4Q13115 394 aa22.57■■□□□ 1.2
SRM-202ENST00000459997 POTEHQ6S545 545 aa22.57■■□□□ 1.2
SRM-202ENST00000459997 METTL23Q86XA0 190 aa22.57■■□□□ 1.2
SRM-202ENST00000459997 GLIS3Q8NEA6 775 aa22.57■■□□□ 1.2
SRM-202ENST00000459997 CRISPLD1Q9H336 500 aa22.57■■□□□ 1.2
SRM-202ENST00000459997 ASAH2Q9NR71 780 aa22.57■■□□□ 1.2
SRM-202ENST00000459997 TCHHQ07283 1943 aa22.57■■□□□ 1.2
SRM-202ENST00000459997 MTMR11A4FU01 709 aa22.56■■□□□ 1.2
SRM-202ENST00000459997 EXTL3O43909 919 aa22.56■■□□□ 1.2
SRM-202ENST00000459997 ECI2O75521 394 aa22.56■■□□□ 1.2
SRM-202ENST00000459997 MICAL2O94851 1124 aa22.56■■□□□ 1.2
SRM-202ENST00000459997 MYL4P12829 197 aa22.56■■□□□ 1.2
SRM-202ENST00000459997 PLD1Q13393 1074 aa22.56■■□□□ 1.2
SRM-202ENST00000459997 SV2CQ496J9 727 aa22.56■■□□□ 1.2
SRM-202ENST00000459997 ATL3Q6DD88 541 aa22.56■■□□□ 1.2
SRM-202ENST00000459997 CENPPQ6IPU0 288 aa22.56■■□□□ 1.2
SRM-202ENST00000459997 CCDC105Q8IYK2 499 aa22.56■■□□□ 1.2
SRM-202ENST00000459997 ATAD1Q8NBU5 361 aa22.56■■□□□ 1.2
SRM-202ENST00000459997 LEMD2Q8NC56 503 aa22.56■■□□□ 1.2
SRM-202ENST00000459997 OR10T2Q8NGX3 314 aa22.56■■□□□ 1.2
SRM-202ENST00000459997 ZNF560Q96MR9 790 aa22.56■■□□□ 1.2
SRM-202ENST00000459997 PCDHA7Q9UN72 937 aa22.56■■□□□ 1.2
SRM-202ENST00000459997 SLC27A5Q9Y2P5 690 aa22.56■■□□□ 1.2
SRM-202ENST00000459997 KPNA7A9QM74 516 aa22.55■■□□□ 1.2
SRM-202ENST00000459997 NRG2O14511 850 aaPredicted RBP22.55■■□□□ 1.2
SRM-202ENST00000459997 POLR2DO15514 142 aaKnown RBP22.55■■□□□ 1.2
SRM-202ENST00000459997 ALDH1A3P47895 512 aa22.55■■□□□ 1.2
SRM-202ENST00000459997 EPHB3P54753 998 aa22.55■■□□□ 1.2
SRM-202ENST00000459997 PHLDB3Q6NSJ2 640 aa22.55■■□□□ 1.2
SRM-202ENST00000459997 MAGEF1Q9HAY2 307 aa22.55■■□□□ 1.2
SRM-202ENST00000459997 FAM13BQ9NYF5 915 aa22.55■■□□□ 1.2
SRM-202ENST00000459997 CFAP45Q9UL16 551 aa22.55■■□□□ 1.2
SRM-202ENST00000459997 ITGB3P05106 788 aa22.54■■□□□ 1.2
SRM-202ENST00000459997 POLR2BP30876 1174 aaKnown RBP22.54■■□□□ 1.2
SRM-202ENST00000459997 PNPLA4P41247 253 aa22.54■■□□□ 1.2
SRM-202ENST00000459997 EPHA5P54756 1037 aa22.54■■□□□ 1.2
SRM-202ENST00000459997 DNM1Q05193 864 aaKnown RBP22.54■■□□□ 1.2
SRM-202ENST00000459997 SNW1Q13573 536 aaKnown RBP22.54■■□□□ 1.2
SRM-202ENST00000459997 SLC39A12Q504Y0 691 aa22.54■■□□□ 1.2
SRM-202ENST00000459997 FAM78AQ5JUQ0 283 aa22.54■■□□□ 1.2
SRM-202ENST00000459997 WSCD1Q658N2 575 aa22.54■■□□□ 1.2
SRM-202ENST00000459997 TANGO2Q6ICL3 276 aa22.54■■□□□ 1.2
SRM-202ENST00000459997 CNNM4Q6P4Q7 775 aa22.54■■□□□ 1.2
SRM-202ENST00000459997 THEM5Q8N1Q8 247 aa22.54■■□□□ 1.2
SRM-202ENST00000459997 GPD1LQ8N335 351 aa22.54■■□□□ 1.2
SRM-202ENST00000459997 TTC9BQ8N6N2 239 aa22.54■■□□□ 1.2
SRM-202ENST00000459997 DTWD2Q8NBA8 298 aa22.54■■□□□ 1.2
SRM-202ENST00000459997 CACTINQ8WUQ7 758 aaKnown RBP22.54■■□□□ 1.2
SRM-202ENST00000459997 ELSPBP1Q96BH3 223 aa22.54■■□□□ 1.2
SRM-202ENST00000459997 BORCS6Q96GS4 357 aa22.54■■□□□ 1.2
SRM-202ENST00000459997 C7orf25Q9BPX7 421 aa22.54■■□□□ 1.2
SRM-202ENST00000459997 PLA2G2FQ9BZM2 168 aa22.54■■□□□ 1.2
SRM-202ENST00000459997 DNAJC25Q9H1X3 360 aa22.54■■□□□ 1.2
SRM-202ENST00000459997 KIAA0391O15091 583 aaKnown RBP22.53■■□□□ 1.2
SRM-202ENST00000459997 EIF3DO15371 548 aaKnown RBP eCLIP22.53■■□□□ 1.2
SRM-202ENST00000459997 MOSPD3O75425 235 aa22.53■■□□□ 1.2
SRM-202ENST00000459997 GJA1P17302 382 aa22.53■■□□□ 1.2
SRM-202ENST00000459997 FCARP24071 287 aa22.53■■□□□ 1.2
SRM-202ENST00000459997 PFKPQ01813 784 aa22.53■■□□□ 1.2
SRM-202ENST00000459997 FAM26FQ5R3K3 315 aa22.53■■□□□ 1.2
SRM-202ENST00000459997 RESP18Q5W5W9 173 aa22.53■■□□□ 1.2
SRM-202ENST00000459997 C1orf127Q8N9H9 656 aa22.53■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms