RNA–Protein interactions for RNA: ENST00000459909.1

TMEM50B-205, Transcript of transmembrane protein 50B, humanhuman

TSL 2

Gene TMEM50B, Length 618 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50B-205ENST00000459909 ZNF280DQ6N043 979 aa18.14■□□□□ 0.49
TMEM50B-205ENST00000459909 HAUS6Q7Z4H7 955 aa18.14■□□□□ 0.49
TMEM50B-205ENST00000459909 EDEM2Q9BV94 578 aa18.14■□□□□ 0.49
TMEM50B-205ENST00000459909 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.14■□□□□ 0.49
TMEM50B-205ENST00000459909 SLC38A7Q9NVC3 462 aa18.14■□□□□ 0.49
TMEM50B-205ENST00000459909 GTSE1Q9NYZ3 720 aa18.14■□□□□ 0.49
TMEM50B-205ENST00000459909 USP20Q9Y2K6 914 aa18.14■□□□□ 0.49
TMEM50B-205ENST00000459909 ZDHHC9Q9Y397 364 aa18.14■□□□□ 0.49
TMEM50B-205ENST00000459909 SRRM3A6NNA2 597 aaPredicted RBP18.13■□□□□ 0.49
TMEM50B-205ENST00000459909 PODXLO00592 558 aa18.13■□□□□ 0.49
TMEM50B-205ENST00000459909 GIPC1O14908 333 aa18.13■□□□□ 0.49
TMEM50B-205ENST00000459909 EDN1P05305 212 aa18.13■□□□□ 0.49
TMEM50B-205ENST00000459909 LIG1P18858 919 aa18.13■□□□□ 0.49
TMEM50B-205ENST00000459909 CEBPZQ03701 1054 aaKnown RBP18.13■□□□□ 0.49
TMEM50B-205ENST00000459909 SOX4Q06945 474 aaPredicted RBP18.13■□□□□ 0.49
TMEM50B-205ENST00000459909 DAB2IPQ5VWQ8 1189 aa18.13■□□□□ 0.49
TMEM50B-205ENST00000459909 LRSAM1Q6UWE0 723 aa18.13■□□□□ 0.49
TMEM50B-205ENST00000459909 APBB1IPQ7Z5R6 666 aaPredicted RBP18.13■□□□□ 0.49
TMEM50B-205ENST00000459909 ARID3BQ8IVW6 561 aaPredicted RBP18.13■□□□□ 0.49
TMEM50B-205ENST00000459909 TTC8Q8TAM2 541 aa18.13■□□□□ 0.49
TMEM50B-205ENST00000459909 ZNF396Q96N95 335 aaPredicted RBP18.13■□□□□ 0.49
TMEM50B-205ENST00000459909 TMEM60Q9H2L4 133 aa18.13■□□□□ 0.49
TMEM50B-205ENST00000459909 CIZ1Q9ULV3 898 aaPredicted RBP18.13■□□□□ 0.49
TMEM50B-205ENST00000459909 A0A087WWV3 80 aa18.12■□□□□ 0.49
TMEM50B-205ENST00000459909 A0A1W2PRU2 124 aa18.12■□□□□ 0.49
TMEM50B-205ENST00000459909 ATG13O75143 517 aa18.12■□□□□ 0.49
TMEM50B-205ENST00000459909 OR52Z1P0C646 297 aa18.12■□□□□ 0.49
TMEM50B-205ENST00000459909 TXKP42681 527 aa18.12■□□□□ 0.49
TMEM50B-205ENST00000459909 NAMPTP43490 491 aa18.12■□□□□ 0.49
TMEM50B-205ENST00000459909 XKR4Q5GH76 650 aa18.12■□□□□ 0.49
TMEM50B-205ENST00000459909 TCEAL6Q6IPX3 200 aa18.12■□□□□ 0.49
TMEM50B-205ENST00000459909 DEPTORQ8TB45 409 aa18.12■□□□□ 0.49
TMEM50B-205ENST00000459909 BSNDQ8WZ55 320 aa18.12■□□□□ 0.49
TMEM50B-205ENST00000459909 TCEAL3Q969E4 200 aa18.12■□□□□ 0.49
TMEM50B-205ENST00000459909 LRRC3Q9BY71 257 aa18.12■□□□□ 0.49
TMEM50B-205ENST00000459909 TOPORSQ9NS56 1045 aaPredicted RBP18.12■□□□□ 0.49
TMEM50B-205ENST00000459909 OBP2AQ9NY56 170 aa18.12■□□□□ 0.49
TMEM50B-205ENST00000459909 SLC8A2Q9UPR5 921 aa18.12■□□□□ 0.49
TMEM50B-205ENST00000459909 NUB1Q9Y5A7 615 aa18.12■□□□□ 0.49
TMEM50B-205ENST00000459909 FASNP49327 2511 aaKnown RBP18.11■□□□□ 0.49
TMEM50B-205ENST00000459909 ZFYVE26Q68DK2 2539 aa18.11■□□□□ 0.49
TMEM50B-205ENST00000459909 C4orf47A7E2U8 309 aa18.11■□□□□ 0.49
TMEM50B-205ENST00000459909 DPYSL4O14531 572 aa18.11■□□□□ 0.49
TMEM50B-205ENST00000459909 SPINK2P20155 84 aa18.11■□□□□ 0.49
TMEM50B-205ENST00000459909 YARSP54577 528 aaKnown RBP18.11■□□□□ 0.49
TMEM50B-205ENST00000459909 PLCB2Q00722 1185 aa18.11■□□□□ 0.49
TMEM50B-205ENST00000459909 PLD1Q13393 1074 aa18.11■□□□□ 0.49
TMEM50B-205ENST00000459909 SF3A1Q15459 793 aaKnown RBP18.11■□□□□ 0.49
TMEM50B-205ENST00000459909 PLK5Q496M5 336 aa18.11■□□□□ 0.49
TMEM50B-205ENST00000459909 ATF7IP2Q5U623 682 aa18.11■□□□□ 0.49
TMEM50B-205ENST00000459909 ALKAL1Q6UXT8 129 aa18.11■□□□□ 0.49
TMEM50B-205ENST00000459909 TMC8Q8IU68 726 aa18.11■□□□□ 0.49
TMEM50B-205ENST00000459909 CAMKK1Q8N5S9 505 aa18.11■□□□□ 0.49
TMEM50B-205ENST00000459909 APPL2Q8NEU8 664 aa18.11■□□□□ 0.49
TMEM50B-205ENST00000459909 GATA6Q92908 595 aa18.11■□□□□ 0.49
TMEM50B-205ENST00000459909 ZFYVE19Q96K21 471 aa18.11■□□□□ 0.49
TMEM50B-205ENST00000459909 LRRC3BQ96PB8 259 aa18.11■□□□□ 0.49
TMEM50B-205ENST00000459909 TTC12Q9H892 705 aaPredicted RBP18.11■□□□□ 0.49
TMEM50B-205ENST00000459909 CHMP5Q9NZZ3 219 aa18.11■□□□□ 0.49
TMEM50B-205ENST00000459909 YIPF1Q9Y548 306 aa18.11■□□□□ 0.49
TMEM50B-205ENST00000459909 ATP6V1DQ9Y5K8 247 aa18.11■□□□□ 0.49
TMEM50B-205ENST00000459909 CLIC4Q9Y696 253 aa18.11■□□□□ 0.49
TMEM50B-205ENST00000459909 BMP15O95972 392 aa18.1■□□□□ 0.49
TMEM50B-205ENST00000459909 CEACAM1P13688 526 aa18.1■□□□□ 0.49
TMEM50B-205ENST00000459909 CPB1P15086 417 aa18.1■□□□□ 0.49
TMEM50B-205ENST00000459909 RPL9P32969 192 aaKnown RBP18.1■□□□□ 0.49
TMEM50B-205ENST00000459909 EFNA5P52803 228 aa18.1■□□□□ 0.49
TMEM50B-205ENST00000459909 RING1Q06587 406 aa18.1■□□□□ 0.49
TMEM50B-205ENST00000459909 PPP2R5AQ15172 486 aa18.1■□□□□ 0.49
TMEM50B-205ENST00000459909 SH3PXD2AQ5TCZ1 1133 aa18.1■□□□□ 0.49
TMEM50B-205ENST00000459909 PKN3Q6P5Z2 889 aa18.1■□□□□ 0.49
TMEM50B-205ENST00000459909 RNF19BQ6ZMZ0 732 aa18.1■□□□□ 0.49
TMEM50B-205ENST00000459909 SUSD3Q96L08 255 aa18.1■□□□□ 0.49
TMEM50B-205ENST00000459909 MTMR9Q96QG7 549 aa18.1■□□□□ 0.49
TMEM50B-205ENST00000459909 USP28Q96RU2 1077 aa18.1■□□□□ 0.49
TMEM50B-205ENST00000459909 TMEM209Q96SK2 561 aa18.1■□□□□ 0.49
TMEM50B-205ENST00000459909 CCDC94Q9BW85 323 aaPredicted RBP18.1■□□□□ 0.49
TMEM50B-205ENST00000459909 TFIP11Q9UBB9 837 aaKnown RBP18.1■□□□□ 0.49
TMEM50B-205ENST00000459909 LHX6Q9UPM6 363 aa18.1■□□□□ 0.49
TMEM50B-205ENST00000459909 TCHHQ07283 1943 aa18.1■□□□□ 0.49
TMEM50B-205ENST00000459909 LAD1O00515 517 aa18.09■□□□□ 0.49
TMEM50B-205ENST00000459909 RHOBTB1O94844 696 aa18.09■□□□□ 0.49
TMEM50B-205ENST00000459909 GRM5P41594 1212 aa18.09■□□□□ 0.49
TMEM50B-205ENST00000459909 ATP2C1P98194 919 aaPredicted RBP18.09■□□□□ 0.49
TMEM50B-205ENST00000459909 PTPAQ15257 358 aa18.09■□□□□ 0.49
TMEM50B-205ENST00000459909 ELF2Q15723 593 aa18.09■□□□□ 0.49
TMEM50B-205ENST00000459909 STXBP5Q5T5C0 1151 aa18.09■□□□□ 0.49
TMEM50B-205ENST00000459909 NT5DC1Q5TFE4 455 aa18.09■□□□□ 0.49
TMEM50B-205ENST00000459909 GPIHBP1Q8IV16 184 aa18.09■□□□□ 0.49
TMEM50B-205ENST00000459909 C4orf32Q8N8J7 132 aa18.09■□□□□ 0.49
TMEM50B-205ENST00000459909 BEST2Q8NFU1 509 aa18.09■□□□□ 0.49
TMEM50B-205ENST00000459909 DDX12PQ92771 950 aa18.09■□□□□ 0.49
TMEM50B-205ENST00000459909 SCNM1Q9BWG6 230 aa18.09■□□□□ 0.49
TMEM50B-205ENST00000459909 DUSP15Q9H1R2 295 aaPredicted RBP18.09■□□□□ 0.49
TMEM50B-205ENST00000459909 SDK1Q7Z5N4 2213 aa18.08■□□□□ 0.49
TMEM50B-205ENST00000459909 PDCD11Q14690 1871 aaKnown RBP18.08■□□□□ 0.49
TMEM50B-205ENST00000459909 CAVIN2O95810 425 aa18.08■□□□□ 0.48
TMEM50B-205ENST00000459909 KCNE1P15382 129 aa18.08■□□□□ 0.48
TMEM50B-205ENST00000459909 CSRP1P21291 193 aaKnown RBP18.08■□□□□ 0.48
TMEM50B-205ENST00000459909 MCM4P33991 863 aa18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms