RNA–Protein interactions for RNA: ENST00000459775.5

USP39-210, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2

Gene USP39, Length 2,148 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-210ENST00000459775 AGAP1Q9UPQ3 857 aa11.07□□□□□ -0.64
USP39-210ENST00000459775 LUC7L2Q9Y383 392 aaKnown RBP11.07□□□□□ -0.64
USP39-210ENST00000459775 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.07□□□□□ -0.647e-6■■□□□ 12.1
USP39-210ENST00000459775 GTPBP10A4D1E9 387 aaKnown RBP11.06□□□□□ -0.64
USP39-210ENST00000459775 TNFRSF10AO00220 468 aa11.06□□□□□ -0.64
USP39-210ENST00000459775 ZNF623O75123 536 aa11.06□□□□□ -0.64
USP39-210ENST00000459775 TNNC2P02585 160 aa11.06□□□□□ -0.64
USP39-210ENST00000459775 CXCL10P02778 98 aa11.06□□□□□ -0.64
USP39-210ENST00000459775 NAT2P11245 290 aa11.06□□□□□ -0.64
USP39-210ENST00000459775 RAP1GAPP47736 663 aa11.06□□□□□ -0.64
USP39-210ENST00000459775 MTF1Q14872 753 aa11.06□□□□□ -0.64
USP39-210ENST00000459775 CCDC70Q6NSX1 233 aa11.06□□□□□ -0.64
USP39-210ENST00000459775 WDR59Q6PJI9 974 aa11.06□□□□□ -0.64
USP39-210ENST00000459775 C16orf59Q7L2K0 433 aa11.06□□□□□ -0.64
USP39-210ENST00000459775 USP37Q86T82 979 aa11.06□□□□□ -0.64
USP39-210ENST00000459775 C17orf53Q8N3J3 647 aaPredicted RBP11.06□□□□□ -0.64
USP39-210ENST00000459775 BADQ92934 168 aa11.06□□□□□ -0.64
USP39-210ENST00000459775 ANKRD36BP1Q96IX9 119 aa11.06□□□□□ -0.64
USP39-210ENST00000459775 NAA15Q9BXJ9 866 aaKnown RBP11.06□□□□□ -0.64
USP39-210ENST00000459775 GPR88Q9GZN0 384 aa11.06□□□□□ -0.64
USP39-210ENST00000459775 XYLT2Q9H1B5 865 aa11.06□□□□□ -0.64
USP39-210ENST00000459775 APEX2Q9UBZ4 518 aa11.06□□□□□ -0.64
USP39-210ENST00000459775 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.06□□□□□ -0.642e-8■■■□□ 16.1
USP39-210ENST00000459775 CASTOR2A6NHX0 329 aa11.06□□□□□ -0.64
USP39-210ENST00000459775 FOXN3O00409 490 aaPredicted RBP11.06□□□□□ -0.64
USP39-210ENST00000459775 KIAA0355O15063 1070 aa11.06□□□□□ -0.64
USP39-210ENST00000459775 STX10O60499 249 aa11.06□□□□□ -0.64
USP39-210ENST00000459775 OFD1O75665 1012 aa11.06□□□□□ -0.64
USP39-210ENST00000459775 WEE2P0C1S8 567 aa11.06□□□□□ -0.64
USP39-210ENST00000459775 CDH8P55286 799 aa11.06□□□□□ -0.64
USP39-210ENST00000459775 NOP14P78316 857 aaKnown RBP11.06□□□□□ -0.64
USP39-210ENST00000459775 TRPC3Q13507 836 aa11.06□□□□□ -0.64
USP39-210ENST00000459775 DRAP1Q14919 205 aaPredicted RBP11.06□□□□□ -0.64
USP39-210ENST00000459775 PAN2Q504Q3 1202 aaKnown RBP11.06□□□□□ -0.64
USP39-210ENST00000459775 XKR4Q5GH76 650 aa11.06□□□□□ -0.64
USP39-210ENST00000459775 OTOP2Q7RTS6 562 aa11.06□□□□□ -0.64
USP39-210ENST00000459775 IQCF2Q8IXL9 164 aa11.06□□□□□ -0.64
USP39-210ENST00000459775 MUC3BQ9H195 1237 aa11.06□□□□□ -0.64
USP39-210ENST00000459775 RSAD1Q9HA92 442 aa11.06□□□□□ -0.64
USP39-210ENST00000459775 PLEKHA5Q9HAU0 1116 aa11.06□□□□□ -0.64
USP39-210ENST00000459775 PLCB1Q9NQ66 1216 aa11.06□□□□□ -0.64
USP39-210ENST00000459775 ABHD10Q9NUJ1 306 aa11.06□□□□□ -0.64
USP39-210ENST00000459775 UTP6Q9NYH9 597 aaKnown RBP11.06□□□□□ -0.64
USP39-210ENST00000459775 IMPACTQ9P2X3 320 aa11.06□□□□□ -0.64
USP39-210ENST00000459775 PYCARDQ9ULZ3 195 aa11.06□□□□□ -0.64
USP39-210ENST00000459775 ANK1P16157 1881 aa11.05□□□□□ -0.64
USP39-210ENST00000459775 ANKRD33BA6NCL7 494 aa11.05□□□□□ -0.64
USP39-210ENST00000459775 ESPNB1AK53 854 aa11.05□□□□□ -0.64
USP39-210ENST00000459775 TULP2O00295 520 aa11.05□□□□□ -0.64
USP39-210ENST00000459775 SPTLC1O15269 473 aa11.05□□□□□ -0.64
USP39-210ENST00000459775 P4HA2O15460 535 aa11.05□□□□□ -0.64
USP39-210ENST00000459775 N4BP1O75113 896 aaKnown RBP11.05□□□□□ -0.64
USP39-210ENST00000459775 GFPT2O94808 682 aa11.05□□□□□ -0.64
USP39-210ENST00000459775 ATICP31939 592 aa11.05□□□□□ -0.64
USP39-210ENST00000459775 USP8P40818 1118 aa11.05□□□□□ -0.64
USP39-210ENST00000459775 FAM189BP81408 668 aa11.05□□□□□ -0.64
USP39-210ENST00000459775 CCZ1BP86790 482 aa11.05□□□□□ -0.64
USP39-210ENST00000459775 CCZ1P86791 482 aaPredicted RBP11.05□□□□□ -0.64
USP39-210ENST00000459775 CETN1Q12798 172 aa11.05□□□□□ -0.64
USP39-210ENST00000459775 ORC1Q13415 861 aa11.05□□□□□ -0.64
USP39-210ENST00000459775 E2F5Q15329 346 aa11.05□□□□□ -0.64
USP39-210ENST00000459775 SURF1Q15526 300 aa11.05□□□□□ -0.64
USP39-210ENST00000459775 NAB2Q15742 525 aa11.05□□□□□ -0.64
USP39-210ENST00000459775 KYAT1Q16773 422 aa11.05□□□□□ -0.64
USP39-210ENST00000459775 TTC30AQ86WT1 665 aa11.05□□□□□ -0.64
USP39-210ENST00000459775 ZNF280BQ86YH2 543 aa11.05□□□□□ -0.64
USP39-210ENST00000459775 TMEM139Q8IV31 216 aa11.05□□□□□ -0.64
USP39-210ENST00000459775 FAM161BQ96MY7 647 aa11.05□□□□□ -0.64
USP39-210ENST00000459775 PPP1R10Q96QC0 940 aaKnown RBP11.05□□□□□ -0.64
USP39-210ENST00000459775 CEP72Q9P209 647 aa11.05□□□□□ -0.64
USP39-210ENST00000459775 C2CD2Q9Y426 696 aa11.05□□□□□ -0.64
USP39-210ENST00000459775 LAMA3Q16787 3333 aa11.05□□□□□ -0.64
USP39-210ENST00000459775 SOWAHDA6NJG2 315 aa11.05□□□□□ -0.64
USP39-210ENST00000459775 PMM2O15305 246 aa11.05□□□□□ -0.64
USP39-210ENST00000459775 HCRTO43612 131 aa11.05□□□□□ -0.64
USP39-210ENST00000459775 KIF5CO60282 957 aa11.05□□□□□ -0.64
USP39-210ENST00000459775 ASS1P00966 412 aaKnown RBP11.05□□□□□ -0.64
USP39-210ENST00000459775 KCNE1P15382 129 aa11.05□□□□□ -0.64
USP39-210ENST00000459775 CD58P19256 250 aa11.05□□□□□ -0.64
USP39-210ENST00000459775 COL9A1P20849 921 aa11.05□□□□□ -0.64
USP39-210ENST00000459775 MAN1A1P33908 653 aa11.05□□□□□ -0.64
USP39-210ENST00000459775 DEFB103AP81534 67 aa11.05□□□□□ -0.64
USP39-210ENST00000459775 ZBED6P86452 979 aa11.05□□□□□ -0.64
USP39-210ENST00000459775 WDR72Q3MJ13 1102 aa11.05□□□□□ -0.64
USP39-210ENST00000459775 CCDC92Q53HC0 331 aaPredicted RBP11.05□□□□□ -0.64
USP39-210ENST00000459775 MFSD5Q6N075 450 aa11.05□□□□□ -0.64
USP39-210ENST00000459775 PDXDC1Q6P996 788 aa11.05□□□□□ -0.64
USP39-210ENST00000459775 DNAAF5Q86Y56 855 aa11.05□□□□□ -0.64
USP39-210ENST00000459775 C3orf58Q8NDZ4 430 aa11.05□□□□□ -0.64
USP39-210ENST00000459775 HASPINQ8TF76 798 aa11.05□□□□□ -0.64
USP39-210ENST00000459775 NT5C1BQ96P26 610 aa11.05□□□□□ -0.64
USP39-210ENST00000459775 NUP58Q9BVL2 599 aa11.05□□□□□ -0.64
USP39-210ENST00000459775 SDCBP2Q9H190 292 aa11.05□□□□□ -0.64
USP39-210ENST00000459775 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.05□□□□□ -0.64
USP39-210ENST00000459775 TRIP11Q15643 1979 aa11.04□□□□□ -0.64
USP39-210ENST00000459775 GOLGA6L6A8MZA4 724 aa11.04□□□□□ -0.64
USP39-210ENST00000459775 I3L4J1 428 aa11.04□□□□□ -0.64
USP39-210ENST00000459775 DDHD2O94830 711 aa11.04□□□□□ -0.64
USP39-210ENST00000459775 ZNF16P17020 682 aaPredicted RBP11.04□□□□□ -0.64
USP39-210ENST00000459775 SSTR3P32745 418 aaPredicted RBP11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms