RNA–Protein interactions for RNA: ENST00000459727.5

HDAC3-202, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 524 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-202ENST00000459727 TCRBV7S2A1N4TA0A589 114 aa9.36□□□□□ -0.91
HDAC3-202ENST00000459727 TMEM120BA0PK00 339 aa9.36□□□□□ -0.91
HDAC3-202ENST00000459727 TMEM191CA6NGB0 347 aa9.36□□□□□ -0.91
HDAC3-202ENST00000459727 SMIM23A6NLE4 172 aa9.36□□□□□ -0.91
HDAC3-202ENST00000459727 DCDC2CA8MYV0 355 aa9.36□□□□□ -0.91
HDAC3-202ENST00000459727 ANKRD65E5RJM6 399 aa9.36□□□□□ -0.91
HDAC3-202ENST00000459727 DNALI1O14645 258 aaPredicted RBP9.36□□□□□ -0.91
HDAC3-202ENST00000459727 OGTO15294 1046 aa9.36□□□□□ -0.91
HDAC3-202ENST00000459727 LIASO43766 372 aa9.36□□□□□ -0.91
HDAC3-202ENST00000459727 MAFO75444 373 aaPredicted RBP9.36□□□□□ -0.91
HDAC3-202ENST00000459727 CAPN15O75808 1086 aa9.36□□□□□ -0.91
HDAC3-202ENST00000459727 ATP5HO75947 161 aa9.36□□□□□ -0.91
HDAC3-202ENST00000459727 IL18RAPO95256 599 aa9.36□□□□□ -0.91
HDAC3-202ENST00000459727 ACSL3O95573 720 aa9.36□□□□□ -0.91
HDAC3-202ENST00000459727 TNNC2P02585 160 aa9.36□□□□□ -0.91
HDAC3-202ENST00000459727 KRT1P04264 644 aa9.36□□□□□ -0.91
HDAC3-202ENST00000459727 ITGAVP06756 1048 aa9.36□□□□□ -0.91
HDAC3-202ENST00000459727 TMEM191BP0C7N4 346 aa9.36□□□□□ -0.91
HDAC3-202ENST00000459727 P4HA1P13674 534 aa9.36□□□□□ -0.91
HDAC3-202ENST00000459727 ATP2A2P16615 1042 aaKnown RBP9.36□□□□□ -0.91
HDAC3-202ENST00000459727 IVDP26440 423 aa9.36□□□□□ -0.91
HDAC3-202ENST00000459727 STX2P32856 288 aa9.36□□□□□ -0.91
HDAC3-202ENST00000459727 NLRP11P59045 1033 aaKnown RBP9.36□□□□□ -0.91
HDAC3-202ENST00000459727 C1QTNF8P60827 252 aa9.36□□□□□ -0.91
HDAC3-202ENST00000459727 CCDC15Q0P6D6 951 aa9.36□□□□□ -0.91
HDAC3-202ENST00000459727 TRPC3Q13507 836 aa9.36□□□□□ -0.91
HDAC3-202ENST00000459727 RIPK1Q13546 671 aa9.36□□□□□ -0.91
HDAC3-202ENST00000459727 ACVR2BQ13705 512 aa9.36□□□□□ -0.91
HDAC3-202ENST00000459727 TMEM132BQ14DG7 1078 aa9.36□□□□□ -0.91
HDAC3-202ENST00000459727 TARBP2Q15633 366 aaKnown RBP9.36□□□□□ -0.91
HDAC3-202ENST00000459727 MAPK6Q16659 721 aa9.36□□□□□ -0.91
HDAC3-202ENST00000459727 TFDP3Q5H9I0 405 aa9.36□□□□□ -0.91
HDAC3-202ENST00000459727 CDCA2Q69YH5 1023 aaPredicted RBP9.36□□□□□ -0.91
HDAC3-202ENST00000459727 DCUN1D2Q6PH85 259 aa9.36□□□□□ -0.91
HDAC3-202ENST00000459727 CRELD2Q6UXH1 353 aaPredicted RBP9.36□□□□□ -0.91
HDAC3-202ENST00000459727 TRPM8Q7Z2W7 1104 aa9.36□□□□□ -0.91
HDAC3-202ENST00000459727 ANKS1BQ7Z6G8 1248 aa9.36□□□□□ -0.91
HDAC3-202ENST00000459727 EXOC3L1Q86VI1 746 aa9.36□□□□□ -0.91
HDAC3-202ENST00000459727 RIOX2Q8IUF8 465 aa9.36□□□□□ -0.91
HDAC3-202ENST00000459727 DHX37Q8IY37 1157 aaKnown RBP9.36□□□□□ -0.91
HDAC3-202ENST00000459727 ZDHHC14Q8IZN3 488 aa9.36□□□□□ -0.91
HDAC3-202ENST00000459727 UBR7Q8N806 425 aa9.36□□□□□ -0.91
HDAC3-202ENST00000459727 PROCA1Q8NCQ7 364 aaPredicted RBP9.36□□□□□ -0.91
HDAC3-202ENST00000459727 ZSWIM2Q8NEG5 633 aa9.36□□□□□ -0.91
HDAC3-202ENST00000459727 CKAP2Q8WWK9 683 aa9.36□□□□□ -0.91
HDAC3-202ENST00000459727 CPA5Q8WXQ8 436 aa9.36□□□□□ -0.91
HDAC3-202ENST00000459727 ZNF516Q92618 1163 aa9.36□□□□□ -0.91
HDAC3-202ENST00000459727 MAGEB18Q96M61 343 aa9.36□□□□□ -0.91
HDAC3-202ENST00000459727 PRMT1Q99873 361 aaKnown RBP9.36□□□□□ -0.91
HDAC3-202ENST00000459727 PI4K2AQ9BTU6 479 aa9.36□□□□□ -0.91
HDAC3-202ENST00000459727 FRMD8Q9BZ67 464 aaPredicted RBP9.36□□□□□ -0.91
HDAC3-202ENST00000459727 OSBPL7Q9BZF2 842 aa9.36□□□□□ -0.91
HDAC3-202ENST00000459727 LHX5Q9H2C1 402 aa9.36□□□□□ -0.91
HDAC3-202ENST00000459727 SLC40A1Q9NP59 571 aa9.36□□□□□ -0.91
HDAC3-202ENST00000459727 CHST7Q9NS84 486 aa9.36□□□□□ -0.91
HDAC3-202ENST00000459727 SLC24A2Q9UI40 661 aa9.36□□□□□ -0.91
HDAC3-202ENST00000459727 ARL2BPQ9Y2Y0 163 aa9.36□□□□□ -0.91
HDAC3-202ENST00000459727 CNTNAP2Q9UHC6 1331 aa9.35□□□□□ -0.91
HDAC3-202ENST00000459727 FAM47DPA6NHR8 397 aa9.35□□□□□ -0.91
HDAC3-202ENST00000459727 PRPF4O43172 522 aaKnown RBP eCLIP9.35□□□□□ -0.91
HDAC3-202ENST00000459727 SNX3O60493 162 aa9.35□□□□□ -0.91
HDAC3-202ENST00000459727 RGS20O76081 388 aa9.35□□□□□ -0.91
HDAC3-202ENST00000459727 VNN1O95497 513 aa9.35□□□□□ -0.91
HDAC3-202ENST00000459727 SLC25A27O95847 323 aa9.35□□□□□ -0.91
HDAC3-202ENST00000459727 OAS1P00973 400 aaKnown RBP9.35□□□□□ -0.91
HDAC3-202ENST00000459727 BRAFP15056 766 aa9.35□□□□□ -0.91
HDAC3-202ENST00000459727 EZRP15311 586 aaKnown RBP9.35□□□□□ -0.91
HDAC3-202ENST00000459727 EDNRBP24530 442 aa9.35□□□□□ -0.91
HDAC3-202ENST00000459727 KLRC2P26717 231 aa9.35□□□□□ -0.91
HDAC3-202ENST00000459727 GBP2P32456 591 aaPredicted RBP9.35□□□□□ -0.91
HDAC3-202ENST00000459727 SSR1P43307 286 aaKnown RBP9.35□□□□□ -0.91
HDAC3-202ENST00000459727 KCNJ1P48048 391 aa9.35□□□□□ -0.91
HDAC3-202ENST00000459727 ACOT2P49753 483 aa9.35□□□□□ -0.91
HDAC3-202ENST00000459727 GMPSP49915 693 aaPredicted RBP9.35□□□□□ -0.91
HDAC3-202ENST00000459727 ALDH5A1P51649 535 aaPredicted RBP9.35□□□□□ -0.91
HDAC3-202ENST00000459727 HMGCS2P54868 508 aa9.35□□□□□ -0.91
HDAC3-202ENST00000459727 VCPP55072 806 aaKnown RBP9.35□□□□□ -0.91
HDAC3-202ENST00000459727 IFI35P80217 286 aaPredicted RBP9.35□□□□□ -0.91
HDAC3-202ENST00000459727 SNX1Q13596 522 aa9.35□□□□□ -0.91
HDAC3-202ENST00000459727 QPCTQ16769 361 aa9.35□□□□□ -0.91
HDAC3-202ENST00000459727 ZC3H12AQ5D1E8 599 aaKnown RBP9.35□□□□□ -0.91
HDAC3-202ENST00000459727 SPDYAQ5MJ70 313 aa9.35□□□□□ -0.91
HDAC3-202ENST00000459727 ZFYVE27Q5T4F4 411 aa9.35□□□□□ -0.91
HDAC3-202ENST00000459727 CYB5D1Q6P9G0 228 aa9.35□□□□□ -0.91
HDAC3-202ENST00000459727 METTL7BQ6UX53 244 aa9.35□□□□□ -0.91
HDAC3-202ENST00000459727 RGS9BPQ6ZS82 235 aa9.35□□□□□ -0.91
HDAC3-202ENST00000459727 PARP9Q8IXQ6 854 aa9.35□□□□□ -0.91
HDAC3-202ENST00000459727 THNSL1Q8IYQ7 743 aa9.35□□□□□ -0.91
HDAC3-202ENST00000459727 LRRC34Q8IZ02 419 aa9.35□□□□□ -0.91
HDAC3-202ENST00000459727 ALLCQ8N6M5 410 aa9.35□□□□□ -0.91
HDAC3-202ENST00000459727 CCDC63Q8NA47 563 aa9.35□□□□□ -0.91
HDAC3-202ENST00000459727 MDM1Q8TC05 714 aa9.35□□□□□ -0.91
HDAC3-202ENST00000459727 FBF1Q8TES7 1133 aa9.35□□□□□ -0.91
HDAC3-202ENST00000459727 SEPT1Q8WYJ6 367 aa9.35□□□□□ -0.91
HDAC3-202ENST00000459727 KAT2BQ92831 832 aa9.35□□□□□ -0.91
HDAC3-202ENST00000459727 ALKBH8Q96BT7 664 aaKnown RBP9.35□□□□□ -0.91
HDAC3-202ENST00000459727 ANKRD36BP1Q96IX9 119 aa9.35□□□□□ -0.91
HDAC3-202ENST00000459727 SLITRK1Q96PX8 696 aa9.35□□□□□ -0.91
HDAC3-202ENST00000459727 SH2D3AQ9BRG2 576 aa9.35□□□□□ -0.91
HDAC3-202ENST00000459727 AAASQ9NRG9 546 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms