RNA–Protein interactions for RNA: ENST00000459274.1

RNU1-88P-201, Transcript of RNA, U1 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU1-88P, Length 128 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-88P-201ENST00000459274 LSM8O95777 96 aaKnown RBP6.22□□□□□ -1.41
RNU1-88P-201ENST00000459274 TIMP1P01033 207 aa6.22□□□□□ -1.41
RNU1-88P-201ENST00000459274 POMCP01189 267 aa6.22□□□□□ -1.41
RNU1-88P-201ENST00000459274 CALB1P05937 261 aa6.22□□□□□ -1.41
RNU1-88P-201ENST00000459274 WEE2P0C1S8 567 aa6.22□□□□□ -1.41
RNU1-88P-201ENST00000459274 CYP11B1P15538 503 aa6.22□□□□□ -1.41
RNU1-88P-201ENST00000459274 PAFAH1B1P43034 410 aa6.22□□□□□ -1.41
RNU1-88P-201ENST00000459274 OR1G1P47890 313 aa6.22□□□□□ -1.41
RNU1-88P-201ENST00000459274 CCL23P55773 120 aa6.22□□□□□ -1.41
RNU1-88P-201ENST00000459274 JAM2P57087 298 aa6.22□□□□□ -1.41
RNU1-88P-201ENST00000459274 GPC5P78333 572 aa6.22□□□□□ -1.41
RNU1-88P-201ENST00000459274 CYP27A1Q02318 531 aa6.22□□□□□ -1.41
RNU1-88P-201ENST00000459274 TAP1Q03518 808 aa6.22□□□□□ -1.41
RNU1-88P-201ENST00000459274 GFPT1Q06210 699 aaPredicted RBP6.22□□□□□ -1.41
RNU1-88P-201ENST00000459274 MGAT3Q09327 533 aa6.22□□□□□ -1.41
RNU1-88P-201ENST00000459274 PPIGQ13427 754 aaKnown RBP eCLIP6.22□□□□□ -1.41
RNU1-88P-201ENST00000459274 HIC1Q14526 733 aa6.22□□□□□ -1.41
RNU1-88P-201ENST00000459274 ZNF394Q53GI3 561 aa6.22□□□□□ -1.41
RNU1-88P-201ENST00000459274 GLRA4Q5JXX5 417 aa6.22□□□□□ -1.41
RNU1-88P-201ENST00000459274 ZNF569Q5MCW4 686 aa6.22□□□□□ -1.41
RNU1-88P-201ENST00000459274 ZFYVE27Q5T4F4 411 aa6.22□□□□□ -1.41
RNU1-88P-201ENST00000459274 CCDC181Q5TID7 509 aa6.22□□□□□ -1.41
RNU1-88P-201ENST00000459274 TAF3Q5VWG9 929 aa6.22□□□□□ -1.41
RNU1-88P-201ENST00000459274 C9orf57Q5W0N0 161 aa6.22□□□□□ -1.41
RNU1-88P-201ENST00000459274 KIAA1841Q6NSI8 718 aa6.22□□□□□ -1.41
RNU1-88P-201ENST00000459274 GJB7Q6PEY0 223 aa6.22□□□□□ -1.41
RNU1-88P-201ENST00000459274 DCLRE1AQ6PJP8 1040 aa6.22□□□□□ -1.41
RNU1-88P-201ENST00000459274 SCARA5Q6ZMJ2 495 aa6.22□□□□□ -1.41
RNU1-88P-201ENST00000459274 IRF2BP2Q7Z5L9 587 aa6.22□□□□□ -1.41
RNU1-88P-201ENST00000459274 ERICH1Q86X53 443 aa6.22□□□□□ -1.41
RNU1-88P-201ENST00000459274 NPAS4Q8IUM7 802 aa6.22□□□□□ -1.41
RNU1-88P-201ENST00000459274 GLYCTKQ8IVS8 523 aa6.22□□□□□ -1.41
RNU1-88P-201ENST00000459274 ARHGEF19Q8IW93 802 aa6.22□□□□□ -1.41
RNU1-88P-201ENST00000459274 FAM71AQ8IYT1 594 aa6.22□□□□□ -1.41
RNU1-88P-201ENST00000459274 TOP6BLQ8N6T0 577 aa6.22□□□□□ -1.41
RNU1-88P-201ENST00000459274 C1orf127Q8N9H9 656 aa6.22□□□□□ -1.41
RNU1-88P-201ENST00000459274 ZSWIM2Q8NEG5 633 aa6.22□□□□□ -1.41
RNU1-88P-201ENST00000459274 MNS1Q8NEH6 495 aa6.22□□□□□ -1.41
RNU1-88P-201ENST00000459274 DBF4BQ8NFT6 615 aa6.22□□□□□ -1.41
RNU1-88P-201ENST00000459274 LMO3Q8TAP4 145 aa6.22□□□□□ -1.41
RNU1-88P-201ENST00000459274 SPATA18Q8TC71 538 aa6.22□□□□□ -1.41
RNU1-88P-201ENST00000459274 HELQQ8TDG4 1101 aa6.22□□□□□ -1.41
RNU1-88P-201ENST00000459274 SEMA4DQ92854 862 aa6.22□□□□□ -1.41
RNU1-88P-201ENST00000459274 TMEM176AQ96HP8 235 aa6.22□□□□□ -1.41
RNU1-88P-201ENST00000459274 VCPIP1Q96JH7 1222 aa6.22□□□□□ -1.41
RNU1-88P-201ENST00000459274 PPP1R13BQ96KQ4 1090 aa6.22□□□□□ -1.41
RNU1-88P-201ENST00000459274 DESI2Q9BSY9 194 aa6.22□□□□□ -1.41
RNU1-88P-201ENST00000459274 OXCT2Q9BYC2 517 aaPredicted RBP6.22□□□□□ -1.41
RNU1-88P-201ENST00000459274 KRTAP4-6Q9BYQ5 205 aa6.22□□□□□ -1.41
RNU1-88P-201ENST00000459274 HAPLN2Q9GZV7 340 aa6.22□□□□□ -1.41
RNU1-88P-201ENST00000459274 KCNF1Q9H3M0 494 aa6.22□□□□□ -1.41
RNU1-88P-201ENST00000459274 VRTNQ9H8Y1 702 aa6.22□□□□□ -1.41
RNU1-88P-201ENST00000459274 SIX2Q9NPC8 291 aa6.22□□□□□ -1.41
RNU1-88P-201ENST00000459274 KCND1Q9NSA2 647 aa6.22□□□□□ -1.41
RNU1-88P-201ENST00000459274 SPTLC3Q9NUV7 552 aa6.22□□□□□ -1.41
RNU1-88P-201ENST00000459274 CTTNBP2NLQ9P2B4 639 aa6.22□□□□□ -1.41
RNU1-88P-201ENST00000459274 ARHGAP20Q9P2F6 1191 aa6.22□□□□□ -1.41
RNU1-88P-201ENST00000459274 WDR35Q9P2L0 1181 aa6.22□□□□□ -1.41
RNU1-88P-201ENST00000459274 DNAI1Q9UI46 699 aa6.22□□□□□ -1.41
RNU1-88P-201ENST00000459274 PYCARDQ9ULZ3 195 aa6.22□□□□□ -1.41
RNU1-88P-201ENST00000459274 BARX2Q9UMQ3 279 aaPredicted RBP6.22□□□□□ -1.41
RNU1-88P-201ENST00000459274 FAN1Q9Y2M0 1017 aa6.22□□□□□ -1.41
RNU1-88P-201ENST00000459274 SCINQ9Y6U3 715 aa6.22□□□□□ -1.41
RNU1-88P-201ENST00000459274 ZBBXA8MT70 800 aa6.21□□□□□ -1.42
RNU1-88P-201ENST00000459274 H7C4K7 107 aa6.21□□□□□ -1.42
RNU1-88P-201ENST00000459274 PODXLO00592 558 aa6.21□□□□□ -1.42
RNU1-88P-201ENST00000459274 ENPP3O14638 875 aa6.21□□□□□ -1.42
RNU1-88P-201ENST00000459274 EPHB6O15197 1021 aa6.21□□□□□ -1.42
RNU1-88P-201ENST00000459274 FAM189A1O60320 539 aa6.21□□□□□ -1.42
RNU1-88P-201ENST00000459274 URI1O94763 535 aaPredicted RBP6.21□□□□□ -1.42
RNU1-88P-201ENST00000459274 BAIAP3O94812 1187 aa6.21□□□□□ -1.42
RNU1-88P-201ENST00000459274 UPP2O95045 317 aa6.21□□□□□ -1.42
RNU1-88P-201ENST00000459274 VNN1O95497 513 aa6.21□□□□□ -1.42
RNU1-88P-201ENST00000459274 FGBP02675 491 aa6.21□□□□□ -1.42
RNU1-88P-201ENST00000459274 FTLP02792 175 aaPredicted RBP6.21□□□□□ -1.42
RNU1-88P-201ENST00000459274 ABCB4P21439 1286 aa6.21□□□□□ -1.42
RNU1-88P-201ENST00000459274 FECHP22830 423 aa6.21□□□□□ -1.42
RNU1-88P-201ENST00000459274 LRPAP1P30533 357 aa6.21□□□□□ -1.42
RNU1-88P-201ENST00000459274 SSR1P43307 286 aaKnown RBP6.21□□□□□ -1.42
RNU1-88P-201ENST00000459274 ACADSBP45954 432 aa6.21□□□□□ -1.42
RNU1-88P-201ENST00000459274 ETF1P62495 437 aaKnown RBP6.21□□□□□ -1.42
RNU1-88P-201ENST00000459274 CAP1Q01518 475 aa6.21□□□□□ -1.42
RNU1-88P-201ENST00000459274 TSPY1Q01534 308 aa6.21□□□□□ -1.42
RNU1-88P-201ENST00000459274 KRT17Q04695 432 aa6.21□□□□□ -1.42
RNU1-88P-201ENST00000459274 FAAP100Q0VG06 881 aa6.21□□□□□ -1.42
RNU1-88P-201ENST00000459274 PLEKHG4Q58EX7 1191 aa6.21□□□□□ -1.42
RNU1-88P-201ENST00000459274 C1orf220Q5T0J3 134 aa6.21□□□□□ -1.42
RNU1-88P-201ENST00000459274 UBXN11Q5T124 520 aa6.21□□□□□ -1.42
RNU1-88P-201ENST00000459274 E4F1Q66K89 784 aaPredicted RBP6.21□□□□□ -1.42
RNU1-88P-201ENST00000459274 SPOPLQ6IQ16 392 aa6.21□□□□□ -1.42
RNU1-88P-201ENST00000459274 ACAD10Q6JQN1 1059 aa6.21□□□□□ -1.42
RNU1-88P-201ENST00000459274 DCUN1D2Q6PH85 259 aa6.21□□□□□ -1.42
RNU1-88P-201ENST00000459274 WDR59Q6PJI9 974 aa6.21□□□□□ -1.42
RNU1-88P-201ENST00000459274 ALKAL1Q6UXT8 129 aa6.21□□□□□ -1.42
RNU1-88P-201ENST00000459274 RAD9BQ6WBX8 426 aa6.21□□□□□ -1.42
RNU1-88P-201ENST00000459274 ZNF662Q6ZS27 426 aa6.21□□□□□ -1.42
RNU1-88P-201ENST00000459274 TOGARAM2Q6ZUX3 1019 aa6.21□□□□□ -1.42
RNU1-88P-201ENST00000459274 SLC47A2Q86VL8 602 aa6.21□□□□□ -1.42
RNU1-88P-201ENST00000459274 EFCAB13Q8IY85 973 aa6.21□□□□□ -1.42
RNU1-88P-201ENST00000459274 TMEM192Q8IY95 271 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms