RNA–Protein interactions for RNA: ENST00000458283.5

PCCA-208, Transcript of propionyl-CoA carboxylase subunit alpha, humanhuman

TSL 3

Gene PCCA, Length 669 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCA-208ENST00000458283 PDLIM2Q96JY6 352 aa11.03□□□□□ -0.64
PCCA-208ENST00000458283 ZNF560Q96MR9 790 aa11.03□□□□□ -0.64
PCCA-208ENST00000458283 SPAG5Q96R06 1193 aa11.03□□□□□ -0.64
PCCA-208ENST00000458283 PAAF1Q9BRP4 392 aa11.03□□□□□ -0.64
PCCA-208ENST00000458283 NIF3L1Q9GZT8 377 aa11.03□□□□□ -0.64
PCCA-208ENST00000458283 SMYD3Q9H7B4 428 aa11.03□□□□□ -0.64
PCCA-208ENST00000458283 UBE2TQ9NPD8 197 aaPredicted RBP11.03□□□□□ -0.64
PCCA-208ENST00000458283 TBC1D13Q9NVG8 400 aa11.03□□□□□ -0.64
PCCA-208ENST00000458283 CEP72Q9P209 647 aa11.03□□□□□ -0.64
PCCA-208ENST00000458283 PRG3Q9Y2Y8 225 aaPredicted RBP11.03□□□□□ -0.64
PCCA-208ENST00000458283 NUB1Q9Y5A7 615 aa11.03□□□□□ -0.64
PCCA-208ENST00000458283 COL4A6Q14031 1691 aa11.02□□□□□ -0.64
PCCA-208ENST00000458283 FAM170AA1A519 330 aa11.02□□□□□ -0.65
PCCA-208ENST00000458283 LCHNA4D1U4 455 aa11.02□□□□□ -0.65
PCCA-208ENST00000458283 LRRC53A6NM62 1247 aa11.02□□□□□ -0.65
PCCA-208ENST00000458283 AKR1B15C9JRZ8 316 aaPredicted RBP11.02□□□□□ -0.65
PCCA-208ENST00000458283 F8W810 466 aa11.02□□□□□ -0.65
PCCA-208ENST00000458283 HOXA2O43364 376 aa11.02□□□□□ -0.65
PCCA-208ENST00000458283 EFCAB14O75071 495 aa11.02□□□□□ -0.65
PCCA-208ENST00000458283 ASS1P00966 412 aaKnown RBP11.02□□□□□ -0.65
PCCA-208ENST00000458283 KRT5P13647 590 aa11.02□□□□□ -0.65
PCCA-208ENST00000458283 KRT9P35527 623 aa11.02□□□□□ -0.65
PCCA-208ENST00000458283 PBX3P40426 434 aa11.02□□□□□ -0.65
PCCA-208ENST00000458283 OR1G1P47890 313 aa11.02□□□□□ -0.65
PCCA-208ENST00000458283 BCAR1P56945 870 aa11.02□□□□□ -0.65
PCCA-208ENST00000458283 TNNC1P63316 161 aa11.02□□□□□ -0.65
PCCA-208ENST00000458283 ARID5AQ03989 594 aa11.02□□□□□ -0.65
PCCA-208ENST00000458283 TBX2Q13207 712 aaPredicted RBP11.02□□□□□ -0.65
PCCA-208ENST00000458283 TUSC3Q13454 348 aa11.02□□□□□ -0.65
PCCA-208ENST00000458283 NAB2Q15742 525 aa11.02□□□□□ -0.65
PCCA-208ENST00000458283 ZNF667Q5HYK9 610 aa11.02□□□□□ -0.65
PCCA-208ENST00000458283 SPOUT1Q5T280 376 aaKnown RBP11.02□□□□□ -0.65
PCCA-208ENST00000458283 PHLDB3Q6NSJ2 640 aa11.02□□□□□ -0.65
PCCA-208ENST00000458283 PDXDC1Q6P996 788 aa11.02□□□□□ -0.65
PCCA-208ENST00000458283 SPRED2Q7Z698 418 aa11.02□□□□□ -0.65
PCCA-208ENST00000458283 ZNF280BQ86YH2 543 aa11.02□□□□□ -0.65
PCCA-208ENST00000458283 LRRC43Q8N309 656 aa11.02□□□□□ -0.65
PCCA-208ENST00000458283 FAM122AQ96E09 287 aa11.02□□□□□ -0.65
PCCA-208ENST00000458283 CASD1Q96PB1 797 aa11.02□□□□□ -0.65
PCCA-208ENST00000458283 FAM193BQ96PV7 902 aaPredicted RBP11.02□□□□□ -0.65
PCCA-208ENST00000458283 TTYH3Q9C0H2 523 aa11.02□□□□□ -0.65
PCCA-208ENST00000458283 ELAC1Q9H777 363 aaKnown RBP11.02□□□□□ -0.65
PCCA-208ENST00000458283 PLCB1Q9NQ66 1216 aa11.02□□□□□ -0.65
PCCA-208ENST00000458283 DNAJB4Q9UDY4 337 aa11.02□□□□□ -0.65
PCCA-208ENST00000458283 COQ4Q9Y3A0 265 aa11.02□□□□□ -0.65
PCCA-208ENST00000458283 TTC3P53804 2025 aa11.02□□□□□ -0.65
PCCA-208ENST00000458283 NLRC5Q86WI3 1866 aa11.02□□□□□ -0.65
PCCA-208ENST00000458283 I3L4J1 428 aa11.01□□□□□ -0.65
PCCA-208ENST00000458283 SPTLC1O15269 473 aa11.01□□□□□ -0.65
PCCA-208ENST00000458283 PMM2O15305 246 aa11.01□□□□□ -0.65
PCCA-208ENST00000458283 GFPT2O94808 682 aa11.01□□□□□ -0.65
PCCA-208ENST00000458283 DDHD2O94830 711 aa11.01□□□□□ -0.65
PCCA-208ENST00000458283 KIF4AO95239 1232 aa11.01□□□□□ -0.65
PCCA-208ENST00000458283 CYP3A5P20815 502 aa11.01□□□□□ -0.65
PCCA-208ENST00000458283 IGFBP6P24592 240 aaPredicted RBP11.01□□□□□ -0.65
PCCA-208ENST00000458283 PLA2G5P39877 138 aa11.01□□□□□ -0.65
PCCA-208ENST00000458283 ASPAP45381 313 aa11.01□□□□□ -0.65
PCCA-208ENST00000458283 TAF6P49848 677 aa11.01□□□□□ -0.65
PCCA-208ENST00000458283 CLCNKBP51801 687 aa11.01□□□□□ -0.65
PCCA-208ENST00000458283 MCCD1P59942 119 aaPredicted RBP11.01□□□□□ -0.65
PCCA-208ENST00000458283 MYO1EQ12965 1108 aa11.01□□□□□ -0.65
PCCA-208ENST00000458283 ORC1Q13415 861 aa11.01□□□□□ -0.65
PCCA-208ENST00000458283 CUL2Q13617 745 aa11.01□□□□□ -0.65
PCCA-208ENST00000458283 DRAP1Q14919 205 aaPredicted RBP11.01□□□□□ -0.65
PCCA-208ENST00000458283 ZBTB6Q15916 424 aa11.01□□□□□ -0.65
PCCA-208ENST00000458283 ASIC2Q16515 512 aa11.01□□□□□ -0.65
PCCA-208ENST00000458283 WDR72Q3MJ13 1102 aa11.01□□□□□ -0.65
PCCA-208ENST00000458283 SV2CQ496J9 727 aa11.01□□□□□ -0.65
PCCA-208ENST00000458283 E4F1Q66K89 784 aaPredicted RBP11.01□□□□□ -0.65
PCCA-208ENST00000458283 DPY19L2P1Q6NXN4 242 aa11.01□□□□□ -0.65
PCCA-208ENST00000458283 CNGA4Q8IV77 575 aa11.01□□□□□ -0.65
PCCA-208ENST00000458283 C3orf58Q8NDZ4 430 aa11.01□□□□□ -0.65
PCCA-208ENST00000458283 ZNF397Q8NF99 534 aaPredicted RBP11.01□□□□□ -0.65
PCCA-208ENST00000458283 CXorf38Q8TB03 319 aa11.01□□□□□ -0.65
PCCA-208ENST00000458283 BAP1Q92560 729 aa11.01□□□□□ -0.65
PCCA-208ENST00000458283 KREMEN1Q96MU8 473 aa11.01□□□□□ -0.65
PCCA-208ENST00000458283 PPP1R9BQ96SB3 815 aa11.01□□□□□ -0.65
PCCA-208ENST00000458283 MMS19Q96T76 1030 aa11.01□□□□□ -0.65
PCCA-208ENST00000458283 YME1L1Q96TA2 773 aa11.01□□□□□ -0.65
PCCA-208ENST00000458283 NUP58Q9BVL2 599 aa11.01□□□□□ -0.65
PCCA-208ENST00000458283 MRPL9Q9BYD2 267 aaKnown RBP11.01□□□□□ -0.65
PCCA-208ENST00000458283 XYLT2Q9H1B5 865 aa11.01□□□□□ -0.65
PCCA-208ENST00000458283 IMPACTQ9P2X3 320 aa11.01□□□□□ -0.65
PCCA-208ENST00000458283 LUC7L2Q9Y383 392 aaKnown RBP11.01□□□□□ -0.65
PCCA-208ENST00000458283 SNX9Q9Y5X1 595 aa11.01□□□□□ -0.65
PCCA-208ENST00000458283 SCN1AP35498 2009 aa11.01□□□□□ -0.65
PCCA-208ENST00000458283 FNDC1Q4ZHG4 1894 aaPredicted RBP11□□□□□ -0.65
PCCA-208ENST00000458283 F8VZ95 297 aa11□□□□□ -0.65
PCCA-208ENST00000458283 INPPL1O15357 1258 aa11□□□□□ -0.65
PCCA-208ENST00000458283 GJB5O95377 273 aa11□□□□□ -0.65
PCCA-208ENST00000458283 CALCAP01258 141 aa11□□□□□ -0.65
PCCA-208ENST00000458283 WEE2P0C1S8 567 aa11□□□□□ -0.65
PCCA-208ENST00000458283 LRPAP1P30533 357 aa11□□□□□ -0.65
PCCA-208ENST00000458283 BRCC3P46736 316 aa11□□□□□ -0.65
PCCA-208ENST00000458283 SLC11A1P49279 550 aa11□□□□□ -0.65
PCCA-208ENST00000458283 MFAP3P55082 362 aa11□□□□□ -0.65
PCCA-208ENST00000458283 GSDMDP57764 484 aa11□□□□□ -0.65
PCCA-208ENST00000458283 ZBED6P86452 979 aa11□□□□□ -0.65
PCCA-208ENST00000458283 SGSM1Q2NKQ1 1148 aa11□□□□□ -0.65
PCCA-208ENST00000458283 TDRD12Q587J7 1177 aaKnown RBP11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms