RNA–Protein interactions for RNA: ENST00000458013.6

SNX27-204, Transcript of sorting nexin family member 27, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SNX27, Length 6,403 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-204ENST00000458013 PLEKP08567 350 aaPredicted RBP20.55■□□□□ 0.88
SNX27-204ENST00000458013 UCHL3P15374 230 aa20.55■□□□□ 0.88
SNX27-204ENST00000458013 ARL4DP49703 201 aa20.55■□□□□ 0.88
SNX27-204ENST00000458013 KYNUQ16719 465 aa20.55■□□□□ 0.88
SNX27-204ENST00000458013 MFSD4BQ5TF39 518 aa20.55■□□□□ 0.88
SNX27-204ENST00000458013 TTC39BQ5VTQ0 682 aaPredicted RBP20.55■□□□□ 0.88
SNX27-204ENST00000458013 PTRHD1Q6GMV3 140 aaKnown RBP20.55■□□□□ 0.88
SNX27-204ENST00000458013 TUFT1Q9NNX1 390 aa20.55■□□□□ 0.88
SNX27-204ENST00000458013 NBNO60934 754 aa20.55■□□□□ 0.88
SNX27-204ENST00000458013 CYBBP04839 570 aa20.55■□□□□ 0.88
SNX27-204ENST00000458013 TAP1Q03518 808 aa20.55■□□□□ 0.88
SNX27-204ENST00000458013 TMEM120BA0PK00 339 aa20.55■□□□□ 0.88
SNX27-204ENST00000458013 H0Y626 953 aa20.55■□□□□ 0.88
SNX27-204ENST00000458013 TPST1O60507 370 aa20.55■□□□□ 0.88
SNX27-204ENST00000458013 TRIM16O95361 564 aa20.55■□□□□ 0.88
SNX27-204ENST00000458013 CHRM3P20309 590 aa20.55■□□□□ 0.88
SNX27-204ENST00000458013 CYP2B6P20813 491 aa20.55■□□□□ 0.88
SNX27-204ENST00000458013 PHF21AQ96BD5 680 aa20.55■□□□□ 0.88
SNX27-204ENST00000458013 TNIP3Q96KP6 325 aa20.55■□□□□ 0.88
SNX27-204ENST00000458013 ZNF512Q96ME7 567 aaPredicted RBP20.55■□□□□ 0.88
SNX27-204ENST00000458013 PHF20Q9BVI0 1012 aa20.55■□□□□ 0.88
SNX27-204ENST00000458013 ZNF556Q9HAH1 456 aa20.55■□□□□ 0.88
SNX27-204ENST00000458013 FAM32AQ9Y421 112 aaKnown RBP20.55■□□□□ 0.88
SNX27-204ENST00000458013 GPAT2Q6NUI2 795 aa20.55■□□□□ 0.88
SNX27-204ENST00000458013 ARMC2Q8NEN0 867 aa20.55■□□□□ 0.88
SNX27-204ENST00000458013 SPATA18Q8TC71 538 aa20.55■□□□□ 0.88
SNX27-204ENST00000458013 OTUB1Q96FW1 271 aaPredicted RBP20.55■□□□□ 0.88
SNX27-204ENST00000458013 GALNTL6Q49A17 601 aa20.55■□□□□ 0.88
SNX27-204ENST00000458013 RAD9BQ6WBX8 426 aa20.55■□□□□ 0.88
SNX27-204ENST00000458013 USP49Q70CQ1 688 aa20.55■□□□□ 0.88
SNX27-204ENST00000458013 USP15Q9Y4E8 981 aaPredicted RBP20.55■□□□□ 0.88
SNX27-204ENST00000458013 B2RBV5 119 aa20.54■□□□□ 0.88
SNX27-204ENST00000458013 PTPN7P35236 360 aa20.54■□□□□ 0.88
SNX27-204ENST00000458013 STX19Q8N4C7 294 aa20.54■□□□□ 0.88
SNX27-204ENST00000458013 IGF2BP3O00425 579 aaKnown RBP eCLIP20.54■□□□□ 0.88
SNX27-204ENST00000458013 STK4Q13043 487 aa20.54■□□□□ 0.88
SNX27-204ENST00000458013 BYSLQ13895 437 aaKnown RBP20.54■□□□□ 0.88
SNX27-204ENST00000458013 SLC18A3Q16572 532 aa20.54■□□□□ 0.88
SNX27-204ENST00000458013 STK33Q9BYT3 514 aa20.54■□□□□ 0.88
SNX27-204ENST00000458013 RNPEPQ9H4A4 650 aa20.54■□□□□ 0.88
SNX27-204ENST00000458013 ZNF609O15014 1411 aa20.54■□□□□ 0.88
SNX27-204ENST00000458013 SKAP2O75563 359 aaPredicted RBP20.54■□□□□ 0.88
SNX27-204ENST00000458013 C6orf222P0C671 652 aaPredicted RBP20.54■□□□□ 0.88
SNX27-204ENST00000458013 SLC1A1P43005 524 aa20.54■□□□□ 0.88
SNX27-204ENST00000458013 USP11P51784 963 aa20.54■□□□□ 0.88
SNX27-204ENST00000458013 TRIP10Q15642 601 aa20.54■□□□□ 0.88
SNX27-204ENST00000458013 ZNF280CQ8ND82 737 aa20.54■□□□□ 0.88
SNX27-204ENST00000458013 BRD8Q9H0E9 1235 aa20.54■□□□□ 0.88
SNX27-204ENST00000458013 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.54■□□□□ 0.883e-7■■■■□ 20.1
SNX27-204ENST00000458013 FLT1P17948 1338 aa20.54■□□□□ 0.88
SNX27-204ENST00000458013 RAD51Q06609 339 aa20.54■□□□□ 0.88
SNX27-204ENST00000458013 RAB42Q8N4Z0 105 aa20.54■□□□□ 0.88
SNX27-204ENST00000458013 TRIM9Q9C026 710 aa20.54■□□□□ 0.88
SNX27-204ENST00000458013 SLC44A2Q8IWA5 706 aaPredicted RBP20.54■□□□□ 0.88
SNX27-204ENST00000458013 SH3TC2Q8TF17 1288 aa20.54■□□□□ 0.88
SNX27-204ENST00000458013 ZC3H15Q8WU90 426 aaKnown RBP20.54■□□□□ 0.88
SNX27-204ENST00000458013 GPBP1L1Q9HC44 474 aaPredicted RBP20.54■□□□□ 0.88
SNX27-204ENST00000458013 TNPO2O14787 897 aaKnown RBP20.53■□□□□ 0.88
SNX27-204ENST00000458013 AGTP01019 485 aa20.53■□□□□ 0.88
SNX27-204ENST00000458013 APOA1P02647 267 aa20.53■□□□□ 0.88
SNX27-204ENST00000458013 NCAM1P13591 858 aa20.53■□□□□ 0.88
SNX27-204ENST00000458013 MAGEA4P43358 317 aa20.53■□□□□ 0.88
SNX27-204ENST00000458013 C16orf89Q6UX73 402 aa20.53■□□□□ 0.88
SNX27-204ENST00000458013 EFCAB14O75071 495 aa20.53■□□□□ 0.88
SNX27-204ENST00000458013 PRKCEQ02156 737 aa20.53■□□□□ 0.88
SNX27-204ENST00000458013 EFCAB12Q6NXP0 572 aa20.53■□□□□ 0.88
SNX27-204ENST00000458013 CALR3Q96L12 384 aaKnown RBP20.53■□□□□ 0.88
SNX27-204ENST00000458013 GRIN1Q05586 938 aa20.53■□□□□ 0.88
SNX27-204ENST00000458013 MTHFD1LQ6UB35 978 aa20.53■□□□□ 0.88
SNX27-204ENST00000458013 RANBP17Q9H2T7 1088 aaKnown RBP20.53■□□□□ 0.88
SNX27-204ENST00000458013 MANSC1Q9H8J5 431 aa20.53■□□□□ 0.88
SNX27-204ENST00000458013 CAB39Q9Y376 341 aaPredicted RBP20.53■□□□□ 0.88
SNX27-204ENST00000458013 CEP78Q5JTW2 689 aa20.53■□□□□ 0.88
SNX27-204ENST00000458013 KCNB2Q92953 911 aa20.53■□□□□ 0.88
SNX27-204ENST00000458013 PTPRHQ9HD43 1115 aa20.53■□□□□ 0.88
SNX27-204ENST00000458013 EIF3HO15372 352 aaKnown RBP eCLIP20.53■□□□□ 0.88
SNX27-204ENST00000458013 PPP1R37O75864 691 aa20.53■□□□□ 0.88
SNX27-204ENST00000458013 RHOBTB1O94844 696 aa20.53■□□□□ 0.88
SNX27-204ENST00000458013 ENOSF1Q7L5Y1 443 aa20.53■□□□□ 0.88
SNX27-204ENST00000458013 JAMLQ86YT9 394 aa20.53■□□□□ 0.88
SNX27-204ENST00000458013 SCFD1Q8WVM8 642 aa20.53■□□□□ 0.88
SNX27-204ENST00000458013 H2AFY2Q9P0M6 372 aaPredicted RBP20.53■□□□□ 0.88
SNX27-204ENST00000458013 HLA-DRAP01903 254 aa20.53■□□□□ 0.88
SNX27-204ENST00000458013 ST8SIA6P61647 398 aa20.53■□□□□ 0.88
SNX27-204ENST00000458013 ARHGEF7Q14155 803 aa20.53■□□□□ 0.88
SNX27-204ENST00000458013 DHX30Q7L2E3 1194 aaKnown RBP eCLIP20.53■□□□□ 0.88
SNX27-204ENST00000458013 SRLQ86TD4 932 aa20.53■□□□□ 0.88
SNX27-204ENST00000458013 PAWRQ96IZ0 340 aaKnown RBP20.53■□□□□ 0.88
SNX27-204ENST00000458013 DTNAQ9Y4J8 743 aa20.53■□□□□ 0.88
SNX27-204ENST00000458013 SRGNP10124 158 aa20.52■□□□□ 0.88
SNX27-204ENST00000458013 EPS8L3Q8TE67 593 aaKnown RBP20.52■□□□□ 0.88
SNX27-204ENST00000458013 AGBL1Q96MI9 1066 aa20.52■□□□□ 0.88
SNX27-204ENST00000458013 AFF2P51816 1311 aa20.52■□□□□ 0.88
SNX27-204ENST00000458013 A0A1W2PQC6 194 aa20.52■□□□□ 0.88
SNX27-204ENST00000458013 PDXKO00764 312 aa20.52■□□□□ 0.88
SNX27-204ENST00000458013 CAPZA2P47755 286 aa20.52■□□□□ 0.88
SNX27-204ENST00000458013 NSUN4Q96CB9 384 aaKnown RBP20.52■□□□□ 0.88
SNX27-204ENST00000458013 XPO6Q96QU8 1125 aaKnown RBP20.52■□□□□ 0.88
SNX27-204ENST00000458013 SLC16A3O15427 465 aaKnown RBP20.52■□□□□ 0.88
SNX27-204ENST00000458013 MED21Q13503 144 aa20.52■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms