RNA–Protein interactions for RNA: ENST00000455661.5

PTPRE-204, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 2

Gene PTPRE, Length 2,304 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-204ENST00000455661 ADRA1DP25100 572 aa14.48□□□□□ -0.09
PTPRE-204ENST00000455661 GPC3P51654 580 aa14.48□□□□□ -0.09
PTPRE-204ENST00000455661 OVGP1Q12889 678 aa14.48□□□□□ -0.09
PTPRE-204ENST00000455661 MORF4L2Q15014 288 aa14.48□□□□□ -0.09
PTPRE-204ENST00000455661 ARHGAP22Q7Z5H3 698 aa14.48□□□□□ -0.09
PTPRE-204ENST00000455661 KATNAL2Q8IYT4 538 aa14.48□□□□□ -0.09
PTPRE-204ENST00000455661 PHC3Q8NDX5 983 aa14.48□□□□□ -0.09
PTPRE-204ENST00000455661 EXD1Q8NHP7 514 aa14.48□□□□□ -0.09
PTPRE-204ENST00000455661 VPS11Q9H270 941 aa14.48□□□□□ -0.09
PTPRE-204ENST00000455661 SUGT1Q9Y2Z0 365 aa14.48□□□□□ -0.09
PTPRE-204ENST00000455661 GREB1LQ9C091 1923 aaPredicted RBP14.47□□□□□ -0.09
PTPRE-204ENST00000455661 FGFR1P11362 822 aa14.47□□□□□ -0.09
PTPRE-204ENST00000455661 UNGP13051 313 aaPredicted RBP14.47□□□□□ -0.09
PTPRE-204ENST00000455661 PHBP35232 272 aa14.47□□□□□ -0.09
PTPRE-204ENST00000455661 PIK3CAP42336 1068 aa14.47□□□□□ -0.09
PTPRE-204ENST00000455661 ARSEP51690 589 aa14.47□□□□□ -0.09
PTPRE-204ENST00000455661 KRT72Q14CN4 511 aa14.47□□□□□ -0.09
PTPRE-204ENST00000455661 FASTKD3Q14CZ7 662 aaKnown RBP14.47□□□□□ -0.09
PTPRE-204ENST00000455661 CERKLQ49MI3 558 aaPredicted RBP14.47□□□□□ -0.09
PTPRE-204ENST00000455661 LIN9Q5TKA1 542 aa14.47□□□□□ -0.09
PTPRE-204ENST00000455661 FOXB2Q5VYV0 432 aa14.47□□□□□ -0.09
PTPRE-204ENST00000455661 PHLDB2Q86SQ0 1253 aa14.47□□□□□ -0.09
PTPRE-204ENST00000455661 PTPRN2Q92932 1015 aa14.47□□□□□ -0.09
PTPRE-204ENST00000455661 ZNF577Q9BSK1 485 aa14.47□□□□□ -0.09
PTPRE-204ENST00000455661 TEKT3Q9BXF9 490 aa14.47□□□□□ -0.09
PTPRE-204ENST00000455661 UNC45AQ9H3U1 944 aa14.47□□□□□ -0.09
PTPRE-204ENST00000455661 TMEM8AQ9HCN3 771 aa14.47□□□□□ -0.09
PTPRE-204ENST00000455661 DMAP1Q9NPF5 467 aaPredicted RBP14.47□□□□□ -0.09
PTPRE-204ENST00000455661 GOLGA8IPA6NC78 632 aa14.47□□□□□ -0.09
PTPRE-204ENST00000455661 GOLGA8JA6NMD2 632 aa14.47□□□□□ -0.09
PTPRE-204ENST00000455661 GJC1P36383 396 aa14.47□□□□□ -0.09
PTPRE-204ENST00000455661 NSFP46459 744 aaKnown RBP14.47□□□□□ -0.09
PTPRE-204ENST00000455661 SERPINB4P48594 390 aa14.47□□□□□ -0.09
PTPRE-204ENST00000455661 CDK16Q00536 496 aa14.47□□□□□ -0.09
PTPRE-204ENST00000455661 GPS1Q13098 491 aa14.47□□□□□ -0.09
PTPRE-204ENST00000455661 EAPPQ56P03 285 aaPredicted RBP14.47□□□□□ -0.09
PTPRE-204ENST00000455661 ZC3H12AQ5D1E8 599 aaKnown RBP14.47□□□□□ -0.09
PTPRE-204ENST00000455661 RASIP1Q5U651 963 aa14.47□□□□□ -0.09
PTPRE-204ENST00000455661 RINLQ6ZS11 566 aa14.47□□□□□ -0.09
PTPRE-204ENST00000455661 FBXL13Q8NEE6 735 aa14.47□□□□□ -0.09
PTPRE-204ENST00000455661 ZSWIM2Q8NEG5 633 aa14.47□□□□□ -0.09
PTPRE-204ENST00000455661 CPA5Q8WXQ8 436 aa14.47□□□□□ -0.09
PTPRE-204ENST00000455661 EZH1Q92800 747 aaPredicted RBP14.47□□□□□ -0.09
PTPRE-204ENST00000455661 CCDC127Q96BQ5 260 aa14.47□□□□□ -0.09
PTPRE-204ENST00000455661 ALKBH8Q96BT7 664 aaKnown RBP14.47□□□□□ -0.09
PTPRE-204ENST00000455661 IWS1Q96ST2 819 aa14.47□□□□□ -0.09
PTPRE-204ENST00000455661 TSSK1BQ9BXA7 367 aa14.47□□□□□ -0.09
PTPRE-204ENST00000455661 VCX3BQ9H321 246 aa14.47□□□□□ -0.09
PTPRE-204ENST00000455661 EHMT1Q9H9B1 1298 aa14.47□□□□□ -0.09
PTPRE-204ENST00000455661 VCX3AQ9NNX9 186 aa14.47□□□□□ -0.09
PTPRE-204ENST00000455661 KANSL3Q9P2N6 904 aa14.47□□□□□ -0.09
PTPRE-204ENST00000455661 NUMBLQ9Y6R0 609 aa14.47□□□□□ -0.09
PTPRE-204ENST00000455661 ZNF831Q5JPB2 1677 aa14.46□□□□□ -0.09
PTPRE-204ENST00000455661 LIASO43766 372 aa14.46□□□□□ -0.09
PTPRE-204ENST00000455661 TAL1P17542 331 aaPredicted RBP14.46□□□□□ -0.09
PTPRE-204ENST00000455661 CD58P19256 250 aa14.46□□□□□ -0.09
PTPRE-204ENST00000455661 SERPINB3P29508 390 aa14.46□□□□□ -0.09
PTPRE-204ENST00000455661 PGM1P36871 562 aa14.46□□□□□ -0.09
PTPRE-204ENST00000455661 PDIA2Q13087 525 aaKnown RBP14.46□□□□□ -0.09
PTPRE-204ENST00000455661 THOC5Q13769 683 aaKnown RBP14.46□□□□□ -0.09
PTPRE-204ENST00000455661 EFHC2Q5JST6 749 aa14.46□□□□□ -0.09
PTPRE-204ENST00000455661 ZFYVE27Q5T4F4 411 aa14.46□□□□□ -0.09
PTPRE-204ENST00000455661 TCP10LQ8TDR4 215 aa14.46□□□□□ -0.09
PTPRE-204ENST00000455661 WDR60Q8WVS4 1066 aa14.46□□□□□ -0.09
PTPRE-204ENST00000455661 DHX38Q92620 1227 aaKnown RBP14.46□□□□□ -0.09
PTPRE-204ENST00000455661 CCDC28BQ9BUN5 200 aa14.46□□□□□ -0.09
PTPRE-204ENST00000455661 ADAM33Q9BZ11 813 aa14.46□□□□□ -0.09
PTPRE-204ENST00000455661 RAB20Q9NX57 234 aa14.46□□□□□ -0.09
PTPRE-204ENST00000455661 TAS2R1Q9NYW7 299 aa14.46□□□□□ -0.09
PTPRE-204ENST00000455661 COQ4Q9Y3A0 265 aa14.46□□□□□ -0.09
PTPRE-204ENST00000455661 ZNF335Q9H4Z2 1342 aaPredicted RBP14.46□□□□□ -0.09
PTPRE-204ENST00000455661 CFBP00751 764 aa14.46□□□□□ -0.1
PTPRE-204ENST00000455661 ADRB2P07550 413 aa14.46□□□□□ -0.1
PTPRE-204ENST00000455661 SNRNP35Q16560 246 aaKnown RBP14.46□□□□□ -0.1
PTPRE-204ENST00000455661 C6orf163Q5TEZ5 329 aa14.46□□□□□ -0.1
PTPRE-204ENST00000455661 CDC42EP5Q6NZY7 148 aa14.46□□□□□ -0.1
PTPRE-204ENST00000455661 ENOSF1Q7L5Y1 443 aa14.46□□□□□ -0.1
PTPRE-204ENST00000455661 HAUS6Q7Z4H7 955 aa14.46□□□□□ -0.1
PTPRE-204ENST00000455661 ZNF677Q86XU0 584 aa14.46□□□□□ -0.1
PTPRE-204ENST00000455661 OGFOD1Q8N543 542 aa14.46□□□□□ -0.1
PTPRE-204ENST00000455661 B4GALNT2Q8NHY0 566 aa14.46□□□□□ -0.1
PTPRE-204ENST00000455661 GMCL1Q96IK5 515 aa14.46□□□□□ -0.1
PTPRE-204ENST00000455661 EPAS1Q99814 870 aa14.46□□□□□ -0.1
PTPRE-204ENST00000455661 LBHD1Q9BQE6 289 aaPredicted RBP14.46□□□□□ -0.1
PTPRE-204ENST00000455661 TMEM120AQ9BXJ8 343 aa14.46□□□□□ -0.1
PTPRE-204ENST00000455661 FHDC1Q9C0D6 1143 aaPredicted RBP14.46□□□□□ -0.1
PTPRE-204ENST00000455661 MRPL47Q9HD33 250 aaKnown RBP14.46□□□□□ -0.1
PTPRE-204ENST00000455661 FETUBQ9UGM5 382 aa14.46□□□□□ -0.1
PTPRE-204ENST00000455661 USTQ9Y2C2 406 aa14.46□□□□□ -0.1
PTPRE-204ENST00000455661 ZNF536O15090 1300 aa14.45□□□□□ -0.1
PTPRE-204ENST00000455661 UMODL1Q5DID0 1318 aa14.45□□□□□ -0.1
PTPRE-204ENST00000455661 TGDSO95455 350 aa14.45□□□□□ -0.1
PTPRE-204ENST00000455661 ZSCAN5DPP0CG00 497 aa14.45□□□□□ -0.1
PTPRE-204ENST00000455661 GSTT1P30711 240 aa14.45□□□□□ -0.1
PTPRE-204ENST00000455661 TAS2R40P59535 323 aa14.45□□□□□ -0.1
PTPRE-204ENST00000455661 CCDC142Q17RM4 750 aa14.45□□□□□ -0.1
PTPRE-204ENST00000455661 LRRC23Q53EV4 343 aaPredicted RBP14.45□□□□□ -0.1
PTPRE-204ENST00000455661 DRICH1Q6PGQ1 229 aaPredicted RBP14.45□□□□□ -0.1
PTPRE-204ENST00000455661 CCDC174Q6PII3 467 aa14.45□□□□□ -0.1
PTPRE-204ENST00000455661 USP37Q86T82 979 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms