RNA–Protein interactions for RNA: ENST00000455596.5

HMGB3-205, Transcript of high mobility group box 3, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene HMGB3, Length 793 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-205ENST00000455596 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP22.92■■□□□ 1.26
HMGB3-205ENST00000455596 PVALEFA0A1B0GWK0 134 aa22.92■■□□□ 1.26
HMGB3-205ENST00000455596 CYB561D2O14569 222 aa22.92■■□□□ 1.26
HMGB3-205ENST00000455596 SRFP11831 508 aa22.92■■□□□ 1.26
HMGB3-205ENST00000455596 PNPLA4P41247 253 aa22.92■■□□□ 1.26
HMGB3-205ENST00000455596 EHHADHQ08426 723 aa22.92■■□□□ 1.26
HMGB3-205ENST00000455596 TWF1Q12792 350 aa22.92■■□□□ 1.26
HMGB3-205ENST00000455596 GPR17Q13304 367 aa22.92■■□□□ 1.26
HMGB3-205ENST00000455596 MTSS1LQ765P7 747 aa22.92■■□□□ 1.26
HMGB3-205ENST00000455596 METTL23Q86XA0 190 aa22.92■■□□□ 1.26
HMGB3-205ENST00000455596 ING5Q8WYH8 240 aa22.92■■□□□ 1.26
HMGB3-205ENST00000455596 PGLYRP2Q96PD5 576 aa22.92■■□□□ 1.26
HMGB3-205ENST00000455596 CORO1BQ9BR76 489 aa22.92■■□□□ 1.26
HMGB3-205ENST00000455596 SERTAD1Q9UHV2 236 aa22.92■■□□□ 1.26
HMGB3-205ENST00000455596 ATP6V1DQ9Y5K8 247 aa22.92■■□□□ 1.26
HMGB3-205ENST00000455596 KPNA7A9QM74 516 aa22.91■■□□□ 1.26
HMGB3-205ENST00000455596 CFHP08603 1231 aa22.91■■□□□ 1.26
HMGB3-205ENST00000455596 SLFN14P0C7P3 912 aa22.91■■□□□ 1.26
HMGB3-205ENST00000455596 HOXD13P35453 343 aa22.91■■□□□ 1.26
HMGB3-205ENST00000455596 CUL4BQ13620 913 aa22.91■■□□□ 1.26
HMGB3-205ENST00000455596 SLC5A9Q2M3M2 681 aa22.91■■□□□ 1.26
HMGB3-205ENST00000455596 IER5LQ5T953 404 aa22.91■■□□□ 1.26
HMGB3-205ENST00000455596 IQCEQ6IPM2 695 aa22.91■■□□□ 1.26
HMGB3-205ENST00000455596 PARM1Q6UWI2 310 aa22.91■■□□□ 1.26
HMGB3-205ENST00000455596 NPAS3Q8IXF0 933 aa22.91■■□□□ 1.26
HMGB3-205ENST00000455596 ST13P5Q8NFI4 369 aaPredicted RBP22.91■■□□□ 1.26
HMGB3-205ENST00000455596 FGF14Q92915 247 aa22.91■■□□□ 1.26
HMGB3-205ENST00000455596 ZNF512Q96ME7 567 aaPredicted RBP22.91■■□□□ 1.26
HMGB3-205ENST00000455596 PDE11AQ9HCR9 933 aa22.91■■□□□ 1.26
HMGB3-205ENST00000455596 WNT16Q9UBV4 365 aa22.91■■□□□ 1.26
HMGB3-205ENST00000455596 ZNF233A6NK53 670 aa22.9■■□□□ 1.26
HMGB3-205ENST00000455596 ZNF197O14709 1029 aa22.9■■□□□ 1.26
HMGB3-205ENST00000455596 ITGB3P05106 788 aa22.9■■□□□ 1.26
HMGB3-205ENST00000455596 PFKFB1P16118 471 aa22.9■■□□□ 1.26
HMGB3-205ENST00000455596 CMA1P23946 247 aa22.9■■□□□ 1.26
HMGB3-205ENST00000455596 POLR2BP30876 1174 aaKnown RBP22.9■■□□□ 1.26
HMGB3-205ENST00000455596 PLD1Q13393 1074 aa22.9■■□□□ 1.26
HMGB3-205ENST00000455596 PDZD4Q76G19 769 aaPredicted RBP22.9■■□□□ 1.26
HMGB3-205ENST00000455596 THEM5Q8N1Q8 247 aa22.9■■□□□ 1.26
HMGB3-205ENST00000455596 C1orf127Q8N9H9 656 aa22.9■■□□□ 1.26
HMGB3-205ENST00000455596 TMEM209Q96SK2 561 aa22.9■■□□□ 1.26
HMGB3-205ENST00000455596 KIAA1586Q9HCI6 787 aa22.9■■□□□ 1.26
HMGB3-205ENST00000455596 HSPBP1Q9NZL4 362 aa22.9■■□□□ 1.26
HMGB3-205ENST00000455596 USP25Q9UHP3 1055 aa22.9■■□□□ 1.26
HMGB3-205ENST00000455596 AGAP1Q9UPQ3 857 aa22.9■■□□□ 1.26
HMGB3-205ENST00000455596 YIPF1Q9Y548 306 aa22.9■■□□□ 1.26
HMGB3-205ENST00000455596 A0A1B0GVL5 298 aa22.89■■□□□ 1.25
HMGB3-205ENST00000455596 MTMR11A4FU01 709 aa22.89■■□□□ 1.25
HMGB3-205ENST00000455596 ACTN4O43707 911 aaKnown RBP22.89■■□□□ 1.25
HMGB3-205ENST00000455596 VNN2O95498 520 aa22.89■■□□□ 1.25
HMGB3-205ENST00000455596 TMEM191BP0C7N4 346 aa22.89■■□□□ 1.25
HMGB3-205ENST00000455596 SURF1Q15526 300 aa22.89■■□□□ 1.25
HMGB3-205ENST00000455596 PRSS36Q5K4E3 855 aa22.89■■□□□ 1.25
HMGB3-205ENST00000455596 CYP4A22Q5TCH4 519 aa22.89■■□□□ 1.25
HMGB3-205ENST00000455596 NELFCDQ8IXH7 590 aa22.89■■□□□ 1.25
HMGB3-205ENST00000455596 GRAMD1CQ8IYS0 662 aa22.89■■□□□ 1.25
HMGB3-205ENST00000455596 SIX5Q8N196 739 aa22.89■■□□□ 1.25
HMGB3-205ENST00000455596 FLCNQ8NFG4 579 aa22.89■■□□□ 1.25
HMGB3-205ENST00000455596 OR10T2Q8NGX3 314 aa22.89■■□□□ 1.25
HMGB3-205ENST00000455596 SCFD1Q8WVM8 642 aa22.89■■□□□ 1.25
HMGB3-205ENST00000455596 MCRS1Q96EZ8 462 aa22.89■■□□□ 1.25
HMGB3-205ENST00000455596 BORCS6Q96GS4 357 aa22.89■■□□□ 1.25
HMGB3-205ENST00000455596 CHAMP1Q96JM3 812 aa22.89■■□□□ 1.25
HMGB3-205ENST00000455596 SLC39A2Q9NP94 309 aa22.89■■□□□ 1.25
HMGB3-205ENST00000455596 GDE1Q9NZC3 331 aa22.89■■□□□ 1.25
HMGB3-205ENST00000455596 CEP72Q9P209 647 aa22.89■■□□□ 1.25
HMGB3-205ENST00000455596 ITGA11Q9UKX5 1188 aa22.89■■□□□ 1.25
HMGB3-205ENST00000455596 TGFB1I1O43294 461 aa22.88■■□□□ 1.25
HMGB3-205ENST00000455596 MICAL2O94851 1124 aa22.88■■□□□ 1.25
HMGB3-205ENST00000455596 SNRPFP62306 86 aaKnown RBP22.88■■□□□ 1.25
HMGB3-205ENST00000455596 DUSP4Q13115 394 aa22.88■■□□□ 1.25
HMGB3-205ENST00000455596 BECN1Q14457 450 aa22.88■■□□□ 1.25
HMGB3-205ENST00000455596 WSCD1Q658N2 575 aa22.88■■□□□ 1.25
HMGB3-205ENST00000455596 ASTLQ6HA08 431 aaPredicted RBP22.88■■□□□ 1.25
HMGB3-205ENST00000455596 CENPPQ6IPU0 288 aa22.88■■□□□ 1.25
HMGB3-205ENST00000455596 CSGALNACT2Q8N6G5 542 aa22.88■■□□□ 1.25
HMGB3-205ENST00000455596 LRRC52Q8N7C0 313 aa22.88■■□□□ 1.25
HMGB3-205ENST00000455596 LEMD2Q8NC56 503 aa22.88■■□□□ 1.25
HMGB3-205ENST00000455596 PRSS33Q8NF86 280 aa22.88■■□□□ 1.25
HMGB3-205ENST00000455596 PAGE5Q96GU1 130 aa22.88■■□□□ 1.25
HMGB3-205ENST00000455596 ANKRD36BP1Q96IX9 119 aa22.88■■□□□ 1.25
HMGB3-205ENST00000455596 RPP25Q9BUL9 199 aaKnown RBP22.88■■□□□ 1.25
HMGB3-205ENST00000455596 MTMR12Q9C0I1 747 aa22.88■■□□□ 1.25
HMGB3-205ENST00000455596 ZCWPW1Q9H0M4 648 aa22.88■■□□□ 1.25
HMGB3-205ENST00000455596 SLC2A4RGQ9NR83 387 aa22.88■■□□□ 1.25
HMGB3-205ENST00000455596 AGPAT3Q9NRZ7 376 aa22.88■■□□□ 1.25
HMGB3-205ENST00000455596 KRT19P08727 400 aa22.87■■□□□ 1.25
HMGB3-205ENST00000455596 CEBPBP17676 345 aa22.87■■□□□ 1.25
HMGB3-205ENST00000455596 ALDH1A3P47895 512 aa22.87■■□□□ 1.25
HMGB3-205ENST00000455596 CLCN5P51795 746 aa22.87■■□□□ 1.25
HMGB3-205ENST00000455596 NUBP1P53384 320 aa22.87■■□□□ 1.25
HMGB3-205ENST00000455596 EPHB3P54753 998 aa22.87■■□□□ 1.25
HMGB3-205ENST00000455596 BMT2Q1RMZ1 405 aa22.87■■□□□ 1.25
HMGB3-205ENST00000455596 HS2ST1Q7LGA3 356 aa22.87■■□□□ 1.25
HMGB3-205ENST00000455596 CBWD2Q8IUF1 395 aa22.87■■□□□ 1.25
HMGB3-205ENST00000455596 HS6ST3Q8IZP7 471 aa22.87■■□□□ 1.25
HMGB3-205ENST00000455596 GPR152Q8TDT2 470 aa22.87■■□□□ 1.25
HMGB3-205ENST00000455596 SCAND2PQ9GZW5 306 aaPredicted RBP22.87■■□□□ 1.25
HMGB3-205ENST00000455596 CRISPLD1Q9H336 500 aa22.87■■□□□ 1.25
HMGB3-205ENST00000455596 ASAH2Q9NR71 780 aa22.87■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms