RNA–Protein interactions for RNA: ENST00000455385.6

SYPL1-202, Transcript of synaptophysin like 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYPL1, Length 2,151 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYPL1-202ENST00000455385 CCDC150Q8NCX0 1101 aa11.51□□□□□ -0.57
SYPL1-202ENST00000455385 TTYH3Q9C0H2 523 aa11.51□□□□□ -0.57
SYPL1-202ENST00000455385 NIF3L1Q9GZT8 377 aa11.51□□□□□ -0.57
SYPL1-202ENST00000455385 CERS4Q9HA82 394 aa11.51□□□□□ -0.57
SYPL1-202ENST00000455385 MSRAQ9UJ68 235 aa11.51□□□□□ -0.57
SYPL1-202ENST00000455385 DNAJC12Q9UKB3 198 aa11.51□□□□□ -0.57
SYPL1-202ENST00000455385 NME7Q9Y5B8 376 aa11.51□□□□□ -0.57
SYPL1-202ENST00000455385 VWA8A3KMH1 1905 aa11.51□□□□□ -0.57
SYPL1-202ENST00000455385 NLRC5Q86WI3 1866 aa11.51□□□□□ -0.57
SYPL1-202ENST00000455385 DNAJB2P25686 324 aa11.51□□□□□ -0.57
SYPL1-202ENST00000455385 TKTP29401 623 aaKnown RBP11.51□□□□□ -0.57
SYPL1-202ENST00000455385 CTNNB1P35222 781 aa11.51□□□□□ -0.57
SYPL1-202ENST00000455385 POLR2FP61218 127 aaKnown RBP11.51□□□□□ -0.57
SYPL1-202ENST00000455385 ERVK-21P61565 698 aa11.51□□□□□ -0.57
SYPL1-202ENST00000455385 TNNC1P63316 161 aa11.51□□□□□ -0.57
SYPL1-202ENST00000455385 SMAD3P84022 425 aaKnown RBP11.51□□□□□ -0.57
SYPL1-202ENST00000455385 GCNT1Q02742 428 aa11.51□□□□□ -0.57
SYPL1-202ENST00000455385 RAB30Q15771 203 aa11.51□□□□□ -0.57
SYPL1-202ENST00000455385 FAM171A1Q5VUB5 890 aa11.51□□□□□ -0.57
SYPL1-202ENST00000455385 OSTM1Q86WC4 334 aa11.51□□□□□ -0.57
SYPL1-202ENST00000455385 PDCL2Q8N4E4 241 aa11.51□□□□□ -0.57
SYPL1-202ENST00000455385 NEK11Q8NG66 645 aa11.51□□□□□ -0.57
SYPL1-202ENST00000455385 KBTBD7Q8WVZ9 684 aa11.51□□□□□ -0.57
SYPL1-202ENST00000455385 TMEM169Q96HH4 297 aa11.51□□□□□ -0.57
SYPL1-202ENST00000455385 TGS1Q96RS0 853 aaKnown RBP11.51□□□□□ -0.57
SYPL1-202ENST00000455385 GPR88Q9GZN0 384 aa11.51□□□□□ -0.57
SYPL1-202ENST00000455385 ALG13Q9NP73 1137 aaKnown RBP11.51□□□□□ -0.57
SYPL1-202ENST00000455385 NLRC4Q9NPP4 1024 aa11.51□□□□□ -0.57
SYPL1-202ENST00000455385 MYO9BQ13459 2157 aa11.5□□□□□ -0.57
SYPL1-202ENST00000455385 C5orf67F2Z3F1 127 aa11.5□□□□□ -0.57
SYPL1-202ENST00000455385 HCRTO43612 131 aa11.5□□□□□ -0.57
SYPL1-202ENST00000455385 HUS1O60921 280 aa11.5□□□□□ -0.57
SYPL1-202ENST00000455385 ACO1P21399 889 aaKnown RBP11.5□□□□□ -0.57
SYPL1-202ENST00000455385 FGFR3P22607 806 aa11.5□□□□□ -0.57
SYPL1-202ENST00000455385 PAX3P23760 479 aa11.5□□□□□ -0.57
SYPL1-202ENST00000455385 PLCB3Q01970 1234 aa11.5□□□□□ -0.57
SYPL1-202ENST00000455385 ARHGAP44Q17R89 818 aa11.5□□□□□ -0.57
SYPL1-202ENST00000455385 LRIT3Q3SXY7 679 aa11.5□□□□□ -0.57
SYPL1-202ENST00000455385 SPECC1LQ69YQ0 1117 aa11.5□□□□□ -0.57
SYPL1-202ENST00000455385 DDX53Q86TM3 631 aaKnown RBP11.5□□□□□ -0.57
SYPL1-202ENST00000455385 UBR7Q8N806 425 aa11.5□□□□□ -0.57
SYPL1-202ENST00000455385 APPL2Q8NEU8 664 aa11.5□□□□□ -0.57
SYPL1-202ENST00000455385 FAXDC2Q96IV6 333 aa11.5□□□□□ -0.57
SYPL1-202ENST00000455385 PCDHB8Q9UN66 801 aa11.5□□□□□ -0.57
SYPL1-202ENST00000455385 CDH23Q9H251 3354 aa11.5□□□□□ -0.57
SYPL1-202ENST00000455385 SF3B1O75533 1304 aaKnown RBP eCLIP11.5□□□□□ -0.57
SYPL1-202ENST00000455385 ITIH6Q6UXX5 1313 aa11.5□□□□□ -0.57
SYPL1-202ENST00000455385 FOXN3O00409 490 aaPredicted RBP11.5□□□□□ -0.57
SYPL1-202ENST00000455385 TRAPPC3O43617 180 aa11.5□□□□□ -0.57
SYPL1-202ENST00000455385 CYP11A1P05108 521 aa11.5□□□□□ -0.57
SYPL1-202ENST00000455385 PNMA6AP0CW24 399 aaPredicted RBP11.5□□□□□ -0.57
SYPL1-202ENST00000455385 CD58P19256 250 aa11.5□□□□□ -0.57
SYPL1-202ENST00000455385 TRIM21P19474 475 aaKnown RBP11.5□□□□□ -0.57
SYPL1-202ENST00000455385 DNAJB1P25685 340 aa11.5□□□□□ -0.57
SYPL1-202ENST00000455385 LMO2P25791 158 aa11.5□□□□□ -0.57
SYPL1-202ENST00000455385 PPM1AP35813 382 aa11.5□□□□□ -0.57
SYPL1-202ENST00000455385 DRAP1Q14919 205 aaPredicted RBP11.5□□□□□ -0.57
SYPL1-202ENST00000455385 RTP2Q5QGT7 225 aa11.5□□□□□ -0.57
SYPL1-202ENST00000455385 PPP2R2DQ66LE6 453 aa11.5□□□□□ -0.57
SYPL1-202ENST00000455385 DPH6Q7L8W6 267 aa11.5□□□□□ -0.57
SYPL1-202ENST00000455385 TMC6Q7Z403 805 aa11.5□□□□□ -0.57
SYPL1-202ENST00000455385 CEP57Q86XR8 500 aa11.5□□□□□ -0.57
SYPL1-202ENST00000455385 TOP6BLQ8N6T0 577 aa11.5□□□□□ -0.57
SYPL1-202ENST00000455385 SPPL3Q8TCT6 385 aa11.5□□□□□ -0.57
SYPL1-202ENST00000455385 WHAMMQ8TF30 809 aa11.5□□□□□ -0.57
SYPL1-202ENST00000455385 CPLX3Q8WVH0 158 aa11.5□□□□□ -0.57
SYPL1-202ENST00000455385 RTP3Q9BQQ7 232 aa11.5□□□□□ -0.57
SYPL1-202ENST00000455385 PLVAPQ9BX97 442 aa11.5□□□□□ -0.57
SYPL1-202ENST00000455385 SLC28A3Q9HAS3 691 aa11.5□□□□□ -0.57
SYPL1-202ENST00000455385 CYP3A43Q9HB55 503 aa11.5□□□□□ -0.57
SYPL1-202ENST00000455385 CHST7Q9NS84 486 aa11.5□□□□□ -0.57
SYPL1-202ENST00000455385 CISHQ9NSE2 258 aa11.5□□□□□ -0.57
SYPL1-202ENST00000455385 HMGXB4Q9UGU5 601 aa11.5□□□□□ -0.57
SYPL1-202ENST00000455385 FBXL5Q9UKA1 691 aa11.5□□□□□ -0.57
SYPL1-202ENST00000455385 MYO7AQ13402 2215 aa11.5□□□□□ -0.57
SYPL1-202ENST00000455385 PLXNA4Q9HCM2 1894 aa11.49□□□□□ -0.57
SYPL1-202ENST00000455385 A0A1W2PPC1 479 aa11.49□□□□□ -0.57
SYPL1-202ENST00000455385 GABRDO14764 452 aa11.49□□□□□ -0.57
SYPL1-202ENST00000455385 TACC1O75410 805 aa11.49□□□□□ -0.57
SYPL1-202ENST00000455385 GYPCP04921 128 aa11.49□□□□□ -0.57
SYPL1-202ENST00000455385 P4HA1P13674 534 aa11.49□□□□□ -0.57
SYPL1-202ENST00000455385 FXR1P51114 621 aaKnown RBP eCLIP11.49□□□□□ -0.57
SYPL1-202ENST00000455385 MFAP3P55082 362 aa11.49□□□□□ -0.57
SYPL1-202ENST00000455385 TBX2Q13207 712 aaPredicted RBP11.49□□□□□ -0.57
SYPL1-202ENST00000455385 RAPGEF1Q13905 1077 aa11.49□□□□□ -0.57
SYPL1-202ENST00000455385 CAMK1Q14012 370 aa11.49□□□□□ -0.57
SYPL1-202ENST00000455385 FIGNQ5HY92 759 aa11.49□□□□□ -0.57
SYPL1-202ENST00000455385 PRPF38BQ5VTL8 546 aaKnown RBP11.49□□□□□ -0.57
SYPL1-202ENST00000455385 KIAA0319Q5VV43 1072 aa11.49□□□□□ -0.57
SYPL1-202ENST00000455385 ADGRF2Q8IZF7 708 aa11.49□□□□□ -0.57
SYPL1-202ENST00000455385 VPS52Q8N1B4 723 aa11.49□□□□□ -0.57
SYPL1-202ENST00000455385 BAP1Q92560 729 aa11.49□□□□□ -0.57
SYPL1-202ENST00000455385 TIFAQ96CG3 184 aa11.49□□□□□ -0.57
SYPL1-202ENST00000455385 TWNKQ96RR1 684 aa11.49□□□□□ -0.57
SYPL1-202ENST00000455385 STK33Q9BYT3 514 aa11.49□□□□□ -0.57
SYPL1-202ENST00000455385 RWDD3Q9Y3V2 267 aa11.49□□□□□ -0.57
SYPL1-202ENST00000455385 CARNS1A5YM72 827 aa11.48□□□□□ -0.57
SYPL1-202ENST00000455385 EPOPA6NHQ4 379 aa11.48□□□□□ -0.57
SYPL1-202ENST00000455385 SYN3O14994 580 aa11.48□□□□□ -0.57
SYPL1-202ENST00000455385 GRM6O15303 877 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms