RNA–Protein interactions for RNA: ENST00000453453.1

SNX17-204, Transcript of sorting nexin 17, humanhuman

TSL 1 (best)

Gene SNX17, Length 1,638 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-204ENST00000453453 TRIP11Q15643 1979 aa16.94■□□□□ 0.3
SNX17-204ENST00000453453 PDE2AO00408 941 aaPredicted RBP16.94■□□□□ 0.3
SNX17-204ENST00000453453 XPOTO43592 962 aaKnown RBP16.94■□□□□ 0.3
SNX17-204ENST00000453453 NOL4O94818 638 aa16.94■□□□□ 0.3
SNX17-204ENST00000453453 FSBPO95073 299 aa16.94■□□□□ 0.3
SNX17-204ENST00000453453 CLTBP09497 229 aa16.94■□□□□ 0.3
SNX17-204ENST00000453453 GNGT1P63211 74 aa16.94■□□□□ 0.3
SNX17-204ENST00000453453 MBTPS1Q14703 1052 aa16.94■□□□□ 0.3
SNX17-204ENST00000453453 SND1Q7KZF4 910 aaKnown RBP eCLIP16.94■□□□□ 0.3
SNX17-204ENST00000453453 FMNL3Q8IVF7 1028 aa16.94■□□□□ 0.3
SNX17-204ENST00000453453 EIF1ADQ8N9N8 165 aaKnown RBP16.94■□□□□ 0.3
SNX17-204ENST00000453453 SMG8Q8ND04 991 aaKnown RBP16.94■□□□□ 0.3
SNX17-204ENST00000453453 BCAS4Q8TDM0 211 aa16.94■□□□□ 0.3
SNX17-204ENST00000453453 SEPT8Q92599 483 aa16.94■□□□□ 0.3
SNX17-204ENST00000453453 PGBD4Q96DM1 585 aa16.94■□□□□ 0.3
SNX17-204ENST00000453453 KIF12Q96FN5 646 aa16.94■□□□□ 0.3
SNX17-204ENST00000453453 CAPZA3Q96KX2 299 aa16.94■□□□□ 0.3
SNX17-204ENST00000453453 SIX2Q9NPC8 291 aa16.94■□□□□ 0.3
SNX17-204ENST00000453453 C1orf112Q9NSG2 853 aa16.94■□□□□ 0.3
SNX17-204ENST00000453453 TMEM39AQ9NV64 488 aa16.94■□□□□ 0.3
SNX17-204ENST00000453453 STIM2Q9P246 746 aa16.94■□□□□ 0.3
SNX17-204ENST00000453453 EPHB6O15197 1021 aa16.93■□□□□ 0.3
SNX17-204ENST00000453453 NFICP08651 508 aa16.93■□□□□ 0.3
SNX17-204ENST00000453453 MYBL2P10244 700 aa16.93■□□□□ 0.3
SNX17-204ENST00000453453 AKAP5P24588 427 aa16.93■□□□□ 0.3
SNX17-204ENST00000453453 NCOA4Q13772 614 aa16.93■□□□□ 0.3
SNX17-204ENST00000453453 KDM7AQ6ZMT4 941 aa16.93■□□□□ 0.3
SNX17-204ENST00000453453 RRAGAQ7L523 313 aa16.93■□□□□ 0.3
SNX17-204ENST00000453453 C3orf20Q8ND61 904 aa16.93■□□□□ 0.3
SNX17-204ENST00000453453 LMO3Q8TAP4 145 aa16.93■□□□□ 0.3
SNX17-204ENST00000453453 APBB2Q92870 758 aa16.93■□□□□ 0.3
SNX17-204ENST00000453453 OSBPL7Q9BZF2 842 aa16.93■□□□□ 0.3
SNX17-204ENST00000453453 PPP1R12CQ9BZL4 782 aa16.93■□□□□ 0.3
SNX17-204ENST00000453453 LACRTQ9GZZ8 138 aa16.93■□□□□ 0.3
SNX17-204ENST00000453453 CNTN3Q9P232 1028 aa16.93■□□□□ 0.3
SNX17-204ENST00000453453 SRGAP2O75044 1071 aa16.92■□□□□ 0.3
SNX17-204ENST00000453453 ZNF623O75123 536 aa16.92■□□□□ 0.3
SNX17-204ENST00000453453 PAFAH1B1P43034 410 aa16.92■□□□□ 0.3
SNX17-204ENST00000453453 GSCP56915 257 aaPredicted RBP16.92■□□□□ 0.3
SNX17-204ENST00000453453 C2orf54Q08AI8 447 aa16.92■□□□□ 0.3
SNX17-204ENST00000453453 RAPGEF1Q13905 1077 aa16.92■□□□□ 0.3
SNX17-204ENST00000453453 LRRC26Q2I0M4 334 aa16.92■□□□□ 0.3
SNX17-204ENST00000453453 PDXDC1Q6P996 788 aa16.92■□□□□ 0.3
SNX17-204ENST00000453453 PLCD3Q8N3E9 789 aa16.92■□□□□ 0.3
SNX17-204ENST00000453453 RNF10Q8N5U6 811 aaKnown RBP16.92■□□□□ 0.3
SNX17-204ENST00000453453 SPATA4Q8NEY3 305 aa16.92■□□□□ 0.3
SNX17-204ENST00000453453 BEST2Q8NFU1 509 aa16.92■□□□□ 0.3
SNX17-204ENST00000453453 SEMA4DQ92854 862 aa16.92■□□□□ 0.3
SNX17-204ENST00000453453 RPS6KC1Q96S38 1066 aa16.92■□□□□ 0.3
SNX17-204ENST00000453453 UBN1Q9NPG3 1134 aa16.92■□□□□ 0.3
SNX17-204ENST00000453453 DNAJC12Q9UKB3 198 aa16.92■□□□□ 0.3
SNX17-204ENST00000453453 ITGA11Q9UKX5 1188 aa16.92■□□□□ 0.3
SNX17-204ENST00000453453 TBX21Q9UL17 535 aa16.92■□□□□ 0.3
SNX17-204ENST00000453453 PLAGL2Q9UPG8 496 aa16.92■□□□□ 0.3
SNX17-204ENST00000453453 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.92■□□□□ 0.3
SNX17-204ENST00000453453 A0A0U1RQF3 1178 aa16.92■□□□□ 0.3
SNX17-204ENST00000453453 LRRC53A6NM62 1247 aa16.92■□□□□ 0.3
SNX17-204ENST00000453453 MGEA5O60502 916 aa16.92■□□□□ 0.3
SNX17-204ENST00000453453 KIAA0754O94854 1291 aa16.92■□□□□ 0.3
SNX17-204ENST00000453453 MFAP3P55082 362 aa16.92■□□□□ 0.3
SNX17-204ENST00000453453 SFMBT2Q5VUG0 894 aa16.92■□□□□ 0.3
SNX17-204ENST00000453453 DPY19L2P1Q6NXN4 242 aa16.92■□□□□ 0.3
SNX17-204ENST00000453453 ENOSF1Q7L5Y1 443 aa16.92■□□□□ 0.3
SNX17-204ENST00000453453 MRPL10Q7Z7H8 261 aaKnown RBP16.92■□□□□ 0.3
SNX17-204ENST00000453453 IFT20Q8IY31 132 aa16.92■□□□□ 0.3
SNX17-204ENST00000453453 TAF4BQ92750 862 aa16.92■□□□□ 0.3
SNX17-204ENST00000453453 CCDC42Q96M95 316 aa16.92■□□□□ 0.3
SNX17-204ENST00000453453 OSBPL9Q96SU4 736 aa16.92■□□□□ 0.3
SNX17-204ENST00000453453 UBE2TQ9NPD8 197 aaPredicted RBP16.92■□□□□ 0.3
SNX17-204ENST00000453453 RGS18Q9NS28 235 aa16.92■□□□□ 0.3
SNX17-204ENST00000453453 UBQLN1Q9UMX0 589 aaKnown RBP16.92■□□□□ 0.3
SNX17-204ENST00000453453 GIT1Q9Y2X7 761 aa16.92■□□□□ 0.3
SNX17-204ENST00000453453 GRID2IPA4D2P6 1211 aa16.91■□□□□ 0.3
SNX17-204ENST00000453453 RCCD1A6NED2 376 aa16.91■□□□□ 0.3
SNX17-204ENST00000453453 MEFVO15553 781 aaPredicted RBP16.91■□□□□ 0.3
SNX17-204ENST00000453453 NBNO60934 754 aa16.91■□□□□ 0.3
SNX17-204ENST00000453453 VNN1O95497 513 aa16.91■□□□□ 0.3
SNX17-204ENST00000453453 KRT19P08727 400 aa16.91■□□□□ 0.3
SNX17-204ENST00000453453 KCNE1P15382 129 aa16.91■□□□□ 0.3
SNX17-204ENST00000453453 RFC2P35250 354 aa16.91■□□□□ 0.3
SNX17-204ENST00000453453 MAPK8IP2Q13387 824 aaPredicted RBP16.91■□□□□ 0.3
SNX17-204ENST00000453453 SGSM1Q2NKQ1 1148 aa16.91■□□□□ 0.3
SNX17-204ENST00000453453 PLEKHG4Q58EX7 1191 aa16.91■□□□□ 0.3
SNX17-204ENST00000453453 ALKAL1Q6UXT8 129 aa16.91■□□□□ 0.3
SNX17-204ENST00000453453 PPM1KQ8N3J5 372 aa16.91■□□□□ 0.3
SNX17-204ENST00000453453 RNF169Q8NCN4 708 aa16.91■□□□□ 0.3
SNX17-204ENST00000453453 RIN2Q8WYP3 895 aaPredicted RBP16.91■□□□□ 0.3
SNX17-204ENST00000453453 BAP1Q92560 729 aa16.91■□□□□ 0.3
SNX17-204ENST00000453453 SYN2Q92777 582 aaPredicted RBP16.91■□□□□ 0.3
SNX17-204ENST00000453453 FAM84AQ96KN4 292 aa16.91■□□□□ 0.3
SNX17-204ENST00000453453 STK33Q9BYT3 514 aa16.91■□□□□ 0.3
SNX17-204ENST00000453453 RNF39Q9H2S5 420 aa16.91■□□□□ 0.3
SNX17-204ENST00000453453 RNF216Q9NWF9 866 aaPredicted RBP16.91■□□□□ 0.3
SNX17-204ENST00000453453 DPP3Q9NY33 737 aa16.91■□□□□ 0.3
SNX17-204ENST00000453453 KLK14Q9P0G3 267 aa16.91■□□□□ 0.3
SNX17-204ENST00000453453 UMODL1Q5DID0 1318 aa16.9■□□□□ 0.3
SNX17-204ENST00000453453 CCDC172P0C7W6 258 aa16.9■□□□□ 0.3
SNX17-204ENST00000453453 CYP2C18P33260 490 aa16.9■□□□□ 0.3
SNX17-204ENST00000453453 STAT1P42224 750 aa16.9■□□□□ 0.3
SNX17-204ENST00000453453 CCL23P55773 120 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms