RNA–Protein interactions for RNA: ENST00000452483.1

HMGB3P21-201, Transcript of high mobility group box 3 pseudogene 21, humanhuman

BASIC

Gene HMGB3P21, Length 547 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P21-201ENST00000452483 FMO1Q01740 532 aa4.84□□□□□ -1.63
HMGB3P21-201ENST00000452483 ADCY2Q08462 1091 aa4.84□□□□□ -1.63
HMGB3P21-201ENST00000452483 DMTNQ08495 405 aa4.84□□□□□ -1.63
HMGB3P21-201ENST00000452483 KLHL30Q0D2K2 578 aa4.84□□□□□ -1.63
HMGB3P21-201ENST00000452483 FGL2Q14314 439 aa4.84□□□□□ -1.63
HMGB3P21-201ENST00000452483 CNGA2Q16280 664 aa4.84□□□□□ -1.63
HMGB3P21-201ENST00000452483 UGT8Q16880 541 aa4.84□□□□□ -1.63
HMGB3P21-201ENST00000452483 CPEB4Q17RY0 729 aaKnown RBP eCLIP4.84□□□□□ -1.63
HMGB3P21-201ENST00000452483 CT83Q5H943 113 aa4.84□□□□□ -1.63
HMGB3P21-201ENST00000452483 SNX30Q5VWJ9 437 aa4.84□□□□□ -1.63
HMGB3P21-201ENST00000452483 MBNL2Q5VZF2 373 aaKnown RBP4.84□□□□□ -1.63
HMGB3P21-201ENST00000452483 MCTP2Q6DN12 878 aa4.84□□□□□ -1.63
HMGB3P21-201ENST00000452483 TANGO2Q6ICL3 276 aa4.84□□□□□ -1.63
HMGB3P21-201ENST00000452483 LIN54Q6MZP7 749 aa4.84□□□□□ -1.63
HMGB3P21-201ENST00000452483 OTOP1Q7RTM1 612 aa4.84□□□□□ -1.63
HMGB3P21-201ENST00000452483 TMPRSS7Q7RTY8 843 aa4.84□□□□□ -1.63
HMGB3P21-201ENST00000452483 R3HCC1LQ7Z5L2 792 aaKnown RBP4.84□□□□□ -1.63
HMGB3P21-201ENST00000452483 ZER1Q7Z7L7 766 aa4.84□□□□□ -1.63
HMGB3P21-201ENST00000452483 TTC7BQ86TV6 843 aa4.84□□□□□ -1.63
HMGB3P21-201ENST00000452483 NOSTRINQ8IVI9 506 aa4.84□□□□□ -1.63
HMGB3P21-201ENST00000452483 HERC6Q8IVU3 1022 aa4.84□□□□□ -1.63
HMGB3P21-201ENST00000452483 THNSL1Q8IYQ7 743 aa4.84□□□□□ -1.63
HMGB3P21-201ENST00000452483 SRBD1Q8N5C6 995 aaKnown RBP4.84□□□□□ -1.63
HMGB3P21-201ENST00000452483 FANCBQ8NB91 859 aa4.84□□□□□ -1.63
HMGB3P21-201ENST00000452483 IL31RAQ8NI17 732 aa4.84□□□□□ -1.63
HMGB3P21-201ENST00000452483 FAM71BQ8TC56 605 aa4.84□□□□□ -1.63
HMGB3P21-201ENST00000452483 STT3BQ8TCJ2 826 aa4.84□□□□□ -1.63
HMGB3P21-201ENST00000452483 DENND1AQ8TEH3 1009 aa4.84□□□□□ -1.63
HMGB3P21-201ENST00000452483 STYXQ8WUJ0 223 aa4.84□□□□□ -1.63
HMGB3P21-201ENST00000452483 RGMAQ96B86 450 aa4.84□□□□□ -1.63
HMGB3P21-201ENST00000452483 BICD1Q96G01 975 aa4.84□□□□□ -1.63
HMGB3P21-201ENST00000452483 ZDHHC15Q96MV8 337 aa4.84□□□□□ -1.63
HMGB3P21-201ENST00000452483 GPR62Q9BZJ7 368 aa4.84□□□□□ -1.63
HMGB3P21-201ENST00000452483 DNAI2Q9GZS0 605 aa4.84□□□□□ -1.63
HMGB3P21-201ENST00000452483 PDCL3Q9H2J4 239 aa4.84□□□□□ -1.63
HMGB3P21-201ENST00000452483 SEPSECSQ9HD40 501 aaKnown RBP4.84□□□□□ -1.63
HMGB3P21-201ENST00000452483 GPR27Q9NS67 375 aa4.84□□□□□ -1.63
HMGB3P21-201ENST00000452483 CATSPERZQ9NTU4 200 aa4.84□□□□□ -1.63
HMGB3P21-201ENST00000452483 TBCCD1Q9NVR7 557 aa4.84□□□□□ -1.63
HMGB3P21-201ENST00000452483 SLTMQ9NWH9 1034 aaKnown RBP eCLIP4.84□□□□□ -1.63
HMGB3P21-201ENST00000452483 TMEM160Q9NX00 188 aa4.84□□□□□ -1.63
HMGB3P21-201ENST00000452483 ADPRHL2Q9NX46 363 aa4.84□□□□□ -1.63
HMGB3P21-201ENST00000452483 ZNF624Q9P2J8 865 aaPredicted RBP4.84□□□□□ -1.63
HMGB3P21-201ENST00000452483 MYO1AQ9UBC5 1043 aa4.84□□□□□ -1.63
HMGB3P21-201ENST00000452483 CHORDC1Q9UHD1 332 aaPredicted RBP4.84□□□□□ -1.63
HMGB3P21-201ENST00000452483 LAMP5Q9UJQ1 280 aa4.84□□□□□ -1.63
HMGB3P21-201ENST00000452483 FBXL21Q9UKT6 434 aa4.84□□□□□ -1.63
HMGB3P21-201ENST00000452483 BACE2Q9Y5Z0 518 aa4.84□□□□□ -1.63
HMGB3P21-201ENST00000452483 SLC12A8A0AV02 714 aa4.83□□□□□ -1.64
HMGB3P21-201ENST00000452483 KRT87PA6NCN2 255 aa4.83□□□□□ -1.64
HMGB3P21-201ENST00000452483 ISM1B1AKI9 464 aa4.83□□□□□ -1.64
HMGB3P21-201ENST00000452483 AKR1B15C9JRZ8 316 aaPredicted RBP4.83□□□□□ -1.64
HMGB3P21-201ENST00000452483 CAPN9O14815 690 aa4.83□□□□□ -1.64
HMGB3P21-201ENST00000452483 SHOXO15266 292 aa4.83□□□□□ -1.64
HMGB3P21-201ENST00000452483 MEFVO15553 781 aaPredicted RBP4.83□□□□□ -1.64
HMGB3P21-201ENST00000452483 SGSM2O43147 1006 aa4.83□□□□□ -1.64
HMGB3P21-201ENST00000452483 KLHL41O60662 606 aa4.83□□□□□ -1.64
HMGB3P21-201ENST00000452483 LRRN2O75325 713 aa4.83□□□□□ -1.64
HMGB3P21-201ENST00000452483 GJB3O75712 270 aa4.83□□□□□ -1.64
HMGB3P21-201ENST00000452483 SLC22A3O75751 556 aa4.83□□□□□ -1.64
HMGB3P21-201ENST00000452483 SNX4O95219 450 aa4.83□□□□□ -1.64
HMGB3P21-201ENST00000452483 TNFRSF6BO95407 300 aa4.83□□□□□ -1.64
HMGB3P21-201ENST00000452483 AFPP02771 609 aaKnown RBP4.83□□□□□ -1.64
HMGB3P21-201ENST00000452483 SFTPCP11686 197 aa4.83□□□□□ -1.64
HMGB3P21-201ENST00000452483 MYL4P12829 197 aa4.83□□□□□ -1.64
HMGB3P21-201ENST00000452483 JUPP14923 745 aa4.83□□□□□ -1.64
HMGB3P21-201ENST00000452483 CD40P25942 277 aa4.83□□□□□ -1.64
HMGB3P21-201ENST00000452483 TPP2P29144 1249 aaPredicted RBP4.83□□□□□ -1.64
HMGB3P21-201ENST00000452483 DPP6P42658 865 aa4.83□□□□□ -1.64
HMGB3P21-201ENST00000452483 MAP2K6P52564 334 aa4.83□□□□□ -1.64
HMGB3P21-201ENST00000452483 ZNF445P59923 1031 aa4.83□□□□□ -1.64
HMGB3P21-201ENST00000452483 RNF4P78317 190 aa4.83□□□□□ -1.64
HMGB3P21-201ENST00000452483 FOXO4P98177 505 aa4.83□□□□□ -1.64
HMGB3P21-201ENST00000452483 ZBTB16Q05516 673 aa4.83□□□□□ -1.64
HMGB3P21-201ENST00000452483 CHRNDQ07001 517 aa4.83□□□□□ -1.64
HMGB3P21-201ENST00000452483 SCRN1Q12765 414 aa4.83□□□□□ -1.64
HMGB3P21-201ENST00000452483 MAMLD1Q13495 774 aa4.83□□□□□ -1.64
HMGB3P21-201ENST00000452483 OASLQ15646 514 aaKnown RBP4.83□□□□□ -1.64
HMGB3P21-201ENST00000452483 CRY1Q16526 586 aa4.83□□□□□ -1.64
HMGB3P21-201ENST00000452483 KIZQ2M2Z5 673 aa4.83□□□□□ -1.64
HMGB3P21-201ENST00000452483 DPY19L1Q2PZI1 675 aa4.83□□□□□ -1.64
HMGB3P21-201ENST00000452483 GAB4Q2WGN9 574 aa4.83□□□□□ -1.64
HMGB3P21-201ENST00000452483 ATPAF1Q5TC12 328 aaPredicted RBP4.83□□□□□ -1.64
HMGB3P21-201ENST00000452483 IYDQ6PHW0 289 aa4.83□□□□□ -1.64
HMGB3P21-201ENST00000452483 C11orf88Q6PI97 169 aa4.83□□□□□ -1.64
HMGB3P21-201ENST00000452483 BEND5Q7L4P6 421 aa4.83□□□□□ -1.64
HMGB3P21-201ENST00000452483 KCNK18Q7Z418 384 aa4.83□□□□□ -1.64
HMGB3P21-201ENST00000452483 PPP1R42Q7Z4L9 355 aa4.83□□□□□ -1.64
HMGB3P21-201ENST00000452483 ZNF804AQ7Z570 1209 aa4.83□□□□□ -1.64
HMGB3P21-201ENST00000452483 SESTD1Q86VW0 696 aa4.83□□□□□ -1.64
HMGB3P21-201ENST00000452483 DZIP1Q86YF9 867 aaKnown RBP4.83□□□□□ -1.64
HMGB3P21-201ENST00000452483 KREMEN2Q8NCW0 462 aa4.83□□□□□ -1.64
HMGB3P21-201ENST00000452483 MNS1Q8NEH6 495 aa4.83□□□□□ -1.64
HMGB3P21-201ENST00000452483 ANKRD20A12PQ8NF67 263 aa4.83□□□□□ -1.64
HMGB3P21-201ENST00000452483 IPMKQ8NFU5 416 aa4.83□□□□□ -1.64
HMGB3P21-201ENST00000452483 PLBD2Q8NHP8 589 aa4.83□□□□□ -1.64
HMGB3P21-201ENST00000452483 FBXO30Q8TB52 745 aa4.83□□□□□ -1.64
HMGB3P21-201ENST00000452483 HSPH1Q92598 858 aa4.83□□□□□ -1.64
HMGB3P21-201ENST00000452483 TBC1D5Q92609 795 aa4.83□□□□□ -1.64
HMGB3P21-201ENST00000452483 ANKS1AQ92625 1134 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms