RNA–Protein interactions for RNA: ENST00000452182.1

SCN9A-204, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

TSL 1 (best)

Gene SCN9A, Length 1,618 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-204ENST00000452182 HASPINQ8TF76 798 aa12.43□□□□□ -0.42
SCN9A-204ENST00000452182 PI4K2AQ9BTU6 479 aa12.43□□□□□ -0.42
SCN9A-204ENST00000452182 GPR62Q9BZJ7 368 aa12.43□□□□□ -0.42
SCN9A-204ENST00000452182 INTS2Q9H0H0 1204 aaKnown RBP12.43□□□□□ -0.42
SCN9A-204ENST00000452182 CHST7Q9NS84 486 aa12.43□□□□□ -0.42
SCN9A-204ENST00000452182 PUF60Q9UHX1 559 aaKnown RBP12.43□□□□□ -0.42
SCN9A-204ENST00000452182 DSEQ9UL01 958 aa12.43□□□□□ -0.42
SCN9A-204ENST00000452182 SNX9Q9Y5X1 595 aa12.43□□□□□ -0.42
SCN9A-204ENST00000452182 TSC2P49815 1807 aa12.43□□□□□ -0.42
SCN9A-204ENST00000452182 TEX33O43247 280 aa12.42□□□□□ -0.42
SCN9A-204ENST00000452182 CBFA2T2O43439 604 aa12.42□□□□□ -0.42
SCN9A-204ENST00000452182 SOD2P04179 222 aa12.42□□□□□ -0.42
SCN9A-204ENST00000452182 CYP11A1P05108 521 aa12.42□□□□□ -0.42
SCN9A-204ENST00000452182 TPM3P06753 285 aa12.42□□□□□ -0.42
SCN9A-204ENST00000452182 ODC1P11926 461 aa12.42□□□□□ -0.42
SCN9A-204ENST00000452182 SLC9A1P19634 815 aa12.42□□□□□ -0.42
SCN9A-204ENST00000452182 FGFR3P22607 806 aa12.42□□□□□ -0.42
SCN9A-204ENST00000452182 GCNT1Q02742 428 aa12.42□□□□□ -0.42
SCN9A-204ENST00000452182 USP41Q3LFD5 358 aa12.42□□□□□ -0.42
SCN9A-204ENST00000452182 DSTYKQ6XUX3 929 aa12.42□□□□□ -0.42
SCN9A-204ENST00000452182 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.42□□□□□ -0.42
SCN9A-204ENST00000452182 SPRED2Q7Z698 418 aa12.42□□□□□ -0.42
SCN9A-204ENST00000452182 TMEM86AQ8N2M4 240 aa12.42□□□□□ -0.42
SCN9A-204ENST00000452182 APPL2Q8NEU8 664 aa12.42□□□□□ -0.42
SCN9A-204ENST00000452182 FAM81BQ96LP2 452 aa12.42□□□□□ -0.42
SCN9A-204ENST00000452182 NT5C1BQ96P26 610 aa12.42□□□□□ -0.42
SCN9A-204ENST00000452182 CRACR2AQ9BSW2 395 aa12.42□□□□□ -0.42
SCN9A-204ENST00000452182 VN1R3Q9BXE9 311 aa12.42□□□□□ -0.42
SCN9A-204ENST00000452182 NIF3L1Q9GZT8 377 aa12.42□□□□□ -0.42
SCN9A-204ENST00000452182 APOBEC3GQ9HC16 384 aaKnown RBP12.42□□□□□ -0.42
SCN9A-204ENST00000452182 PLCB1Q9NQ66 1216 aa12.42□□□□□ -0.42
SCN9A-204ENST00000452182 IFNKQ9P0W0 207 aa12.42□□□□□ -0.42
SCN9A-204ENST00000452182 SIK3Q9Y2K2 1263 aa12.42□□□□□ -0.42
SCN9A-204ENST00000452182 DAAM1Q9Y4D1 1078 aa12.42□□□□□ -0.42
SCN9A-204ENST00000452182 VWA8A3KMH1 1905 aa12.42□□□□□ -0.42
SCN9A-204ENST00000452182 CYB561D2O14569 222 aa12.41□□□□□ -0.42
SCN9A-204ENST00000452182 HUS1O60921 280 aa12.41□□□□□ -0.42
SCN9A-204ENST00000452182 TACC1O75410 805 aa12.41□□□□□ -0.42
SCN9A-204ENST00000452182 TBXAS1P24557 533 aaPredicted RBP12.41□□□□□ -0.42
SCN9A-204ENST00000452182 ASPAP45381 313 aa12.41□□□□□ -0.42
SCN9A-204ENST00000452182 TNNC1P63316 161 aa12.41□□□□□ -0.42
SCN9A-204ENST00000452182 FAM171A1Q5VUB5 890 aa12.41□□□□□ -0.42
SCN9A-204ENST00000452182 SPOPLQ6IQ16 392 aa12.41□□□□□ -0.42
SCN9A-204ENST00000452182 PHLDB3Q6NSJ2 640 aa12.41□□□□□ -0.42
SCN9A-204ENST00000452182 DPY19L2P1Q6NXN4 242 aa12.41□□□□□ -0.42
SCN9A-204ENST00000452182 SPPL3Q8TCT6 385 aa12.41□□□□□ -0.42
SCN9A-204ENST00000452182 JAKMIP2Q96AA8 810 aa12.41□□□□□ -0.42
SCN9A-204ENST00000452182 HERC2P3Q9BVR0 1158 aa12.41□□□□□ -0.42
SCN9A-204ENST00000452182 BCO2Q9BYV7 579 aa12.41□□□□□ -0.42
SCN9A-204ENST00000452182 ZNF576Q9H609 170 aa12.41□□□□□ -0.42
SCN9A-204ENST00000452182 CYP3A43Q9HB55 503 aa12.41□□□□□ -0.42
SCN9A-204ENST00000452182 NXF1Q9UBU9 619 aaKnown RBP12.41□□□□□ -0.42
SCN9A-204ENST00000452182 APEX2Q9UBZ4 518 aa12.41□□□□□ -0.42
SCN9A-204ENST00000452182 FBXL5Q9UKA1 691 aa12.41□□□□□ -0.42
SCN9A-204ENST00000452182 MTUS1Q9ULD2 1270 aa12.41□□□□□ -0.42
SCN9A-204ENST00000452182 FSD2A1L4K1 749 aa12.4□□□□□ -0.42
SCN9A-204ENST00000452182 I3L4J1 428 aa12.4□□□□□ -0.42
SCN9A-204ENST00000452182 GABRDO14764 452 aa12.4□□□□□ -0.42
SCN9A-204ENST00000452182 TRANK1O15050 2925 aa12.4□□□□□ -0.42
SCN9A-204ENST00000452182 OAZ2O95190 189 aa12.4□□□□□ -0.42
SCN9A-204ENST00000452182 RFX1P22670 979 aa12.4□□□□□ -0.42
SCN9A-204ENST00000452182 PBX1P40424 430 aa12.4□□□□□ -0.42
SCN9A-204ENST00000452182 DSG1Q02413 1049 aa12.4□□□□□ -0.42
SCN9A-204ENST00000452182 MRPL58Q14197 206 aaKnown RBP12.4□□□□□ -0.42
SCN9A-204ENST00000452182 SYCP1Q15431 976 aa12.4□□□□□ -0.42
SCN9A-204ENST00000452182 SOWAHAQ2M3V2 549 aa12.4□□□□□ -0.42
SCN9A-204ENST00000452182 GPR153Q6NV75 609 aa12.4□□□□□ -0.42
SCN9A-204ENST00000452182 PDXDC1Q6P996 788 aa12.4□□□□□ -0.42
SCN9A-204ENST00000452182 ENOSF1Q7L5Y1 443 aa12.4□□□□□ -0.42
SCN9A-204ENST00000452182 TTC39CQ8N584 583 aa12.4□□□□□ -0.42
SCN9A-204ENST00000452182 TATDN2Q93075 761 aa12.4□□□□□ -0.42
SCN9A-204ENST00000452182 TTPALQ9BTX7 342 aa12.4□□□□□ -0.42
SCN9A-204ENST00000452182 XPO4Q9C0E2 1151 aaKnown RBP12.4□□□□□ -0.42
SCN9A-204ENST00000452182 LMAN2LQ9H0V9 348 aa12.4□□□□□ -0.42
SCN9A-204ENST00000452182 ZBP1Q9H171 429 aa12.4□□□□□ -0.42
SCN9A-204ENST00000452182 ALG13Q9NP73 1137 aaKnown RBP12.4□□□□□ -0.42
SCN9A-204ENST00000452182 SIX2Q9NPC8 291 aa12.4□□□□□ -0.42
SCN9A-204ENST00000452182 L1RE1Q9UN81 338 aa12.4□□□□□ -0.42
SCN9A-204ENST00000452182 SSX2IPQ9Y2D8 614 aa12.4□□□□□ -0.42
SCN9A-204ENST00000452182 AP5Z1O43299 807 aa12.4□□□□□ -0.42
SCN9A-204ENST00000452182 CTSAP10619 480 aa12.4□□□□□ -0.42
SCN9A-204ENST00000452182 TKTP29401 623 aaKnown RBP12.4□□□□□ -0.42
SCN9A-204ENST00000452182 GLUD2P49448 558 aa12.4□□□□□ -0.42
SCN9A-204ENST00000452182 GPM6BQ13491 265 aa12.4□□□□□ -0.42
SCN9A-204ENST00000452182 CUL2Q13617 745 aa12.4□□□□□ -0.42
SCN9A-204ENST00000452182 KLHDC7AQ5VTJ3 777 aa12.4□□□□□ -0.42
SCN9A-204ENST00000452182 KIAA0319Q5VV43 1072 aa12.4□□□□□ -0.42
SCN9A-204ENST00000452182 PDE12Q6L8Q7 609 aaKnown RBP12.4□□□□□ -0.42
SCN9A-204ENST00000452182 ANKS3Q6ZW76 656 aa12.4□□□□□ -0.42
SCN9A-204ENST00000452182 TAS1R1Q7RTX1 841 aa12.4□□□□□ -0.42
SCN9A-204ENST00000452182 VPS52Q8N1B4 723 aa12.4□□□□□ -0.42
SCN9A-204ENST00000452182 PPM1KQ8N3J5 372 aa12.4□□□□□ -0.42
SCN9A-204ENST00000452182 PDCL2Q8N4E4 241 aa12.4□□□□□ -0.42
SCN9A-204ENST00000452182 POF1BQ8WVV4 589 aa12.4□□□□□ -0.42
SCN9A-204ENST00000452182 ARNTL2Q8WYA1 636 aa12.4□□□□□ -0.42
SCN9A-204ENST00000452182 PIK3R5Q8WYR1 880 aa12.4□□□□□ -0.42
SCN9A-204ENST00000452182 MMS19Q96T76 1030 aa12.4□□□□□ -0.42
SCN9A-204ENST00000452182 OXCT2Q9BYC2 517 aaPredicted RBP12.4□□□□□ -0.42
SCN9A-204ENST00000452182 POLIQ9UNA4 740 aa12.4□□□□□ -0.42
SCN9A-204ENST00000452182 IRAK3Q9Y616 596 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms