RNA–Protein interactions for RNA: ENST00000452128.6

SCAMP4-205, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 2

Gene SCAMP4, Length 718 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-205ENST00000452128 CRISPLD1Q9H336 500 aa17.39■□□□□ 0.37
SCAMP4-205ENST00000452128 AGAP1Q9UPQ3 857 aa17.39■□□□□ 0.37
SCAMP4-205ENST00000452128 NR2E1Q9Y466 385 aa17.39■□□□□ 0.37
SCAMP4-205ENST00000452128 TECTAO75443 2155 aa17.39■□□□□ 0.37
SCAMP4-205ENST00000452128 CYB561D2O14569 222 aa17.38■□□□□ 0.37
SCAMP4-205ENST00000452128 ITGB3P05106 788 aa17.38■□□□□ 0.37
SCAMP4-205ENST00000452128 ALADP13716 330 aa17.38■□□□□ 0.37
SCAMP4-205ENST00000452128 PNOCQ13519 176 aa17.38■□□□□ 0.37
SCAMP4-205ENST00000452128 DUOXA2Q1HG44 320 aa17.38■□□□□ 0.37
SCAMP4-205ENST00000452128 WSCD1Q658N2 575 aa17.38■□□□□ 0.37
SCAMP4-205ENST00000452128 LMBRD2Q68DH5 695 aaPredicted RBP17.38■□□□□ 0.37
SCAMP4-205ENST00000452128 OVOS1Q6IE37 1185 aa17.38■□□□□ 0.37
SCAMP4-205ENST00000452128 WDR49Q8IV35 697 aa17.38■□□□□ 0.37
SCAMP4-205ENST00000452128 CSGALNACT2Q8N6G5 542 aa17.38■□□□□ 0.37
SCAMP4-205ENST00000452128 RDH13Q8NBN7 331 aa17.38■□□□□ 0.37
SCAMP4-205ENST00000452128 EDAQ92838 391 aa17.38■□□□□ 0.37
SCAMP4-205ENST00000452128 MYADMQ96S97 322 aa17.38■□□□□ 0.37
SCAMP4-205ENST00000452128 AVENQ9NQS1 362 aaPredicted RBP17.38■□□□□ 0.37
SCAMP4-205ENST00000452128 CHMP5Q9NZZ3 219 aa17.38■□□□□ 0.37
SCAMP4-205ENST00000452128 EPS15L1Q9UBC2 864 aa17.38■□□□□ 0.37
SCAMP4-205ENST00000452128 DNMT3BQ9UBC3 853 aaKnown RBP17.38■□□□□ 0.37
SCAMP4-205ENST00000452128 C2orf16Q68DN1 1984 aa17.38■□□□□ 0.37
SCAMP4-205ENST00000452128 CLUHO75153 1309 aa17.38■□□□□ 0.37
SCAMP4-205ENST00000452128 NOTCH4Q99466 2003 aa17.38■□□□□ 0.37
SCAMP4-205ENST00000452128 DENND4AQ7Z401 1863 aa17.37■□□□□ 0.37
SCAMP4-205ENST00000452128 CST3P01034 146 aaPredicted RBP17.37■□□□□ 0.37
SCAMP4-205ENST00000452128 ODC1P11926 461 aa17.37■□□□□ 0.37
SCAMP4-205ENST00000452128 PNPLA4P41247 253 aa17.37■□□□□ 0.37
SCAMP4-205ENST00000452128 CASP4P49662 377 aa17.37■□□□□ 0.37
SCAMP4-205ENST00000452128 RBP5P82980 135 aa17.37■□□□□ 0.37
SCAMP4-205ENST00000452128 COBLL1Q53SF7 1204 aa17.37■□□□□ 0.37
SCAMP4-205ENST00000452128 PPM1LQ5SGD2 360 aa17.37■□□□□ 0.37
SCAMP4-205ENST00000452128 C1orf220Q5T0J3 134 aa17.37■□□□□ 0.37
SCAMP4-205ENST00000452128 LIN9Q5TKA1 542 aa17.37■□□□□ 0.37
SCAMP4-205ENST00000452128 CCDC149Q6ZUS6 474 aa17.37■□□□□ 0.37
SCAMP4-205ENST00000452128 OTOP3Q7RTS5 596 aa17.37■□□□□ 0.37
SCAMP4-205ENST00000452128 TRAPPC11Q7Z392 1133 aa17.37■□□□□ 0.37
SCAMP4-205ENST00000452128 LRRTM3Q86VH5 581 aa17.37■□□□□ 0.37
SCAMP4-205ENST00000452128 PARD3BQ8TEW8 1205 aa17.37■□□□□ 0.37
SCAMP4-205ENST00000452128 ZCWPW1Q9H0M4 648 aa17.37■□□□□ 0.37
SCAMP4-205ENST00000452128 LIMD1Q9UGP4 676 aa17.37■□□□□ 0.37
SCAMP4-205ENST00000452128 DSEQ9UL01 958 aa17.37■□□□□ 0.37
SCAMP4-205ENST00000452128 PCDHA5Q9Y5H7 936 aa17.37■□□□□ 0.37
SCAMP4-205ENST00000452128 MYO10Q9HD67 2058 aa17.36■□□□□ 0.37
SCAMP4-205ENST00000452128 NRG2O14511 850 aaPredicted RBP17.36■□□□□ 0.37
SCAMP4-205ENST00000452128 GABRDO14764 452 aa17.36■□□□□ 0.37
SCAMP4-205ENST00000452128 CCL16O15467 120 aa17.36■□□□□ 0.37
SCAMP4-205ENST00000452128 OR4Q2P0C623 313 aa17.36■□□□□ 0.37
SCAMP4-205ENST00000452128 SP100P23497 879 aaPredicted RBP17.36■□□□□ 0.37
SCAMP4-205ENST00000452128 NTHL1P78549 312 aa17.36■□□□□ 0.37
SCAMP4-205ENST00000452128 ZXDAP98168 799 aa17.36■□□□□ 0.37
SCAMP4-205ENST00000452128 ADCY1Q08828 1119 aa17.36■□□□□ 0.37
SCAMP4-205ENST00000452128 CENPPQ6IPU0 288 aa17.36■□□□□ 0.37
SCAMP4-205ENST00000452128 GRASPQ7Z6J2 395 aaPredicted RBP17.36■□□□□ 0.37
SCAMP4-205ENST00000452128 PLCD3Q8N3E9 789 aa17.36■□□□□ 0.37
SCAMP4-205ENST00000452128 PDCL2Q8N4E4 241 aa17.36■□□□□ 0.37
SCAMP4-205ENST00000452128 GSDMAQ96QA5 445 aa17.36■□□□□ 0.37
SCAMP4-205ENST00000452128 PKMYT1Q99640 499 aa17.36■□□□□ 0.37
SCAMP4-205ENST00000452128 CGRRF1Q99675 332 aa17.36■□□□□ 0.37
SCAMP4-205ENST00000452128 C1QTNF1Q9BXJ1 281 aa17.36■□□□□ 0.37
SCAMP4-205ENST00000452128 HCFC1R1Q9NWW0 138 aa17.36■□□□□ 0.37
SCAMP4-205ENST00000452128 L1RE1Q9UN81 338 aa17.36■□□□□ 0.37
SCAMP4-205ENST00000452128 DOCK8Q8NF50 2099 aa17.36■□□□□ 0.37
SCAMP4-205ENST00000452128 ANHXE9PGG2 379 aa17.35■□□□□ 0.37
SCAMP4-205ENST00000452128 C4BPAP04003 597 aaKnown RBP17.35■□□□□ 0.37
SCAMP4-205ENST00000452128 NR3C1P04150 777 aa17.35■□□□□ 0.37
SCAMP4-205ENST00000452128 ARPP19P56211 112 aa17.35■□□□□ 0.37
SCAMP4-205ENST00000452128 PTPN21Q16825 1174 aa17.35■□□□□ 0.37
SCAMP4-205ENST00000452128 SOWAHAQ2M3V2 549 aa17.35■□□□□ 0.37
SCAMP4-205ENST00000452128 SV2CQ496J9 727 aa17.35■□□□□ 0.37
SCAMP4-205ENST00000452128 CLEC17AQ6ZS10 378 aa17.35■□□□□ 0.37
SCAMP4-205ENST00000452128 USP37Q86T82 979 aa17.35■□□□□ 0.37
SCAMP4-205ENST00000452128 TDRD5Q8NAT2 981 aaKnown RBP17.35■□□□□ 0.37
SCAMP4-205ENST00000452128 ATAD1Q8NBU5 361 aa17.35■□□□□ 0.37
SCAMP4-205ENST00000452128 ZNF560Q96MR9 790 aa17.35■□□□□ 0.37
SCAMP4-205ENST00000452128 LRFN3Q9BTN0 628 aa17.35■□□□□ 0.37
SCAMP4-205ENST00000452128 LRRC3Q9BY71 257 aa17.35■□□□□ 0.37
SCAMP4-205ENST00000452128 XYLT2Q9H1B5 865 aa17.35■□□□□ 0.37
SCAMP4-205ENST00000452128 TSHZ2Q9NRE2 1034 aa17.35■□□□□ 0.37
SCAMP4-205ENST00000452128 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.35■□□□□ 0.377e-7■□□□□ 9.9
SCAMP4-205ENST00000452128 CEP72Q9P209 647 aa17.35■□□□□ 0.37
SCAMP4-205ENST00000452128 HSFX1Q9UBD0 423 aa17.35■□□□□ 0.37
SCAMP4-205ENST00000452128 MAPK8IP1Q9UQF2 711 aa17.35■□□□□ 0.37
SCAMP4-205ENST00000452128 INSL5Q9Y5Q6 135 aa17.35■□□□□ 0.37
SCAMP4-205ENST00000452128 MTMR11A4FU01 709 aa17.34■□□□□ 0.37
SCAMP4-205ENST00000452128 GOLGA6L4A6NEF3 574 aa17.34■□□□□ 0.37
SCAMP4-205ENST00000452128 MAPK13O15264 365 aa17.34■□□□□ 0.37
SCAMP4-205ENST00000452128 EXOC3O60645 756 aa17.34■□□□□ 0.37
SCAMP4-205ENST00000452128 XYLBO75191 536 aa17.34■□□□□ 0.37
SCAMP4-205ENST00000452128 PRPF40AO75400 957 aaKnown RBP17.34■□□□□ 0.37
SCAMP4-205ENST00000452128 STAU1O95793 577 aaKnown RBP17.34■□□□□ 0.37
SCAMP4-205ENST00000452128 TMEM191BP0C7N4 346 aa17.34■□□□□ 0.37
SCAMP4-205ENST00000452128 LAMP2P13473 410 aa17.34■□□□□ 0.37
SCAMP4-205ENST00000452128 EPHA5P54756 1037 aa17.34■□□□□ 0.37
SCAMP4-205ENST00000452128 OSTM1Q86WC4 334 aa17.34■□□□□ 0.37
SCAMP4-205ENST00000452128 ZC3H3Q8IXZ2 948 aaKnown RBP17.34■□□□□ 0.37
SCAMP4-205ENST00000452128 TOP6BLQ8N6T0 577 aa17.34■□□□□ 0.37
SCAMP4-205ENST00000452128 ITFG1Q8TB96 612 aa17.34■□□□□ 0.37
SCAMP4-205ENST00000452128 SPATA18Q8TC71 538 aa17.34■□□□□ 0.37
SCAMP4-205ENST00000452128 TMC2Q8TDI7 906 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms