RNA–Protein interactions for RNA: ENST00000452047.1

CPSF4-208, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 3

Gene CPSF4, Length 687 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-208ENST00000452047 SAAL1Q96ER3 474 aa13.5□□□□□ -0.25
CPSF4-208ENST00000452047 PGLYRP2Q96PD5 576 aa13.5□□□□□ -0.25
CPSF4-208ENST00000452047 TMEM209Q96SK2 561 aa13.5□□□□□ -0.25
CPSF4-208ENST00000452047 KXD1Q9BQD3 176 aa13.5□□□□□ -0.25
CPSF4-208ENST00000452047 RTP3Q9BQQ7 232 aa13.5□□□□□ -0.25
CPSF4-208ENST00000452047 CBWD1Q9BRT8 395 aa13.5□□□□□ -0.25
CPSF4-208ENST00000452047 FAM213AQ9BRX8 229 aa13.5□□□□□ -0.25
CPSF4-208ENST00000452047 TRIM9Q9C026 710 aa13.5□□□□□ -0.25
CPSF4-208ENST00000452047 IRF2BPLQ9H1B7 796 aa13.5□□□□□ -0.25
CPSF4-208ENST00000452047 CUEDC2Q9H467 287 aa13.5□□□□□ -0.25
CPSF4-208ENST00000452047 TBC1D17Q9HA65 648 aa13.5□□□□□ -0.25
CPSF4-208ENST00000452047 FAM86C1Q9NVL1 165 aa13.5□□□□□ -0.25
CPSF4-208ENST00000452047 DPP3Q9NY33 737 aa13.5□□□□□ -0.25
CPSF4-208ENST00000452047 MIA3Q5JRA6 1907 aa13.5□□□□□ -0.25
CPSF4-208ENST00000452047 ZFHX2Q9C0A1 2572 aaPredicted RBP13.5□□□□□ -0.25
CPSF4-208ENST00000452047 COL4A2P08572 1712 aa13.5□□□□□ -0.25
CPSF4-208ENST00000452047 MTMR11A4FU01 709 aa13.49□□□□□ -0.25
CPSF4-208ENST00000452047 MOSPD3O75425 235 aa13.49□□□□□ -0.25
CPSF4-208ENST00000452047 ECI2O75521 394 aa13.49□□□□□ -0.25
CPSF4-208ENST00000452047 PRPF6O94906 941 aaKnown RBP13.49□□□□□ -0.25
CPSF4-208ENST00000452047 FCARP24071 287 aa13.49□□□□□ -0.25
CPSF4-208ENST00000452047 DUSP4Q13115 394 aa13.49□□□□□ -0.25
CPSF4-208ENST00000452047 PHLDB3Q6NSJ2 640 aa13.49□□□□□ -0.25
CPSF4-208ENST00000452047 CNNM4Q6P4Q7 775 aa13.49□□□□□ -0.25
CPSF4-208ENST00000452047 PDZD4Q76G19 769 aaPredicted RBP13.49□□□□□ -0.25
CPSF4-208ENST00000452047 CCDC65Q8IXS2 484 aa13.49□□□□□ -0.25
CPSF4-208ENST00000452047 CCDC105Q8IYK2 499 aa13.49□□□□□ -0.25
CPSF4-208ENST00000452047 HS6ST3Q8IZP7 471 aa13.49□□□□□ -0.25
CPSF4-208ENST00000452047 OR10T2Q8NGX3 314 aa13.49□□□□□ -0.25
CPSF4-208ENST00000452047 KCNG4Q8TDN1 519 aa13.49□□□□□ -0.25
CPSF4-208ENST00000452047 HPS3Q969F9 1004 aa13.49□□□□□ -0.25
CPSF4-208ENST00000452047 DHX58Q96C10 678 aa13.49□□□□□ -0.25
CPSF4-208ENST00000452047 MCRS1Q96EZ8 462 aa13.49□□□□□ -0.25
CPSF4-208ENST00000452047 BORCS6Q96GS4 357 aa13.49□□□□□ -0.25
CPSF4-208ENST00000452047 DNAJC25Q9H1X3 360 aa13.49□□□□□ -0.25
CPSF4-208ENST00000452047 ZNF197O14709 1029 aa13.48□□□□□ -0.25
CPSF4-208ENST00000452047 LDHAP00338 332 aaKnown RBP13.48□□□□□ -0.25
CPSF4-208ENST00000452047 HSP90AA1P07900 732 aaKnown RBP13.48□□□□□ -0.25
CPSF4-208ENST00000452047 HOXD13P35453 343 aa13.48□□□□□ -0.25
CPSF4-208ENST00000452047 TAF6P49848 677 aa13.48□□□□□ -0.25
CPSF4-208ENST00000452047 STARD6P59095 220 aa13.48□□□□□ -0.25
CPSF4-208ENST00000452047 FOXD4L6Q3SYB3 417 aaPredicted RBP13.48□□□□□ -0.25
CPSF4-208ENST00000452047 IQCEQ6IPM2 695 aa13.48□□□□□ -0.25
CPSF4-208ENST00000452047 CENPPQ6IPU0 288 aa13.48□□□□□ -0.25
CPSF4-208ENST00000452047 FOXD4L3Q6VB84 417 aaPredicted RBP13.48□□□□□ -0.25
CPSF4-208ENST00000452047 TMC8Q8IU68 726 aa13.48□□□□□ -0.25
CPSF4-208ENST00000452047 SYCP3Q8IZU3 236 aa13.48□□□□□ -0.25
CPSF4-208ENST00000452047 ELMOD1Q8N336 334 aa13.48□□□□□ -0.25
CPSF4-208ENST00000452047 TTC9BQ8N6N2 239 aa13.48□□□□□ -0.25
CPSF4-208ENST00000452047 IQUBQ8NA54 791 aa13.48□□□□□ -0.25
CPSF4-208ENST00000452047 ATAD1Q8NBU5 361 aa13.48□□□□□ -0.25
CPSF4-208ENST00000452047 LEMD2Q8NC56 503 aa13.48□□□□□ -0.25
CPSF4-208ENST00000452047 CXorf38Q8TB03 319 aa13.48□□□□□ -0.25
CPSF4-208ENST00000452047 ATOH1Q92858 354 aaPredicted RBP13.48□□□□□ -0.25
CPSF4-208ENST00000452047 ZNF512Q96ME7 567 aaPredicted RBP13.48□□□□□ -0.25
CPSF4-208ENST00000452047 LRRC3Q9BY71 257 aa13.48□□□□□ -0.25
CPSF4-208ENST00000452047 PLA2G2FQ9BZM2 168 aa13.48□□□□□ -0.25
CPSF4-208ENST00000452047 TMEM206Q9H813 350 aa13.48□□□□□ -0.25
CPSF4-208ENST00000452047 RBAKQ9NYW8 714 aaPredicted RBP13.48□□□□□ -0.25
CPSF4-208ENST00000452047 DLGAP2Q9P1A6 1054 aa13.48□□□□□ -0.25
CPSF4-208ENST00000452047 DSEQ9UL01 958 aa13.48□□□□□ -0.25
CPSF4-208ENST00000452047 GOLGA8IPA6NC78 632 aa13.47□□□□□ -0.25
CPSF4-208ENST00000452047 GOLGA8JA6NMD2 632 aa13.47□□□□□ -0.25
CPSF4-208ENST00000452047 KPNA7A9QM74 516 aa13.47□□□□□ -0.25
CPSF4-208ENST00000452047 CYB561D2O14569 222 aa13.47□□□□□ -0.25
CPSF4-208ENST00000452047 EXTL3O43909 919 aa13.47□□□□□ -0.25
CPSF4-208ENST00000452047 EHHADHQ08426 723 aa13.47□□□□□ -0.25
CPSF4-208ENST00000452047 PLD1Q13393 1074 aa13.47□□□□□ -0.25
CPSF4-208ENST00000452047 FAM78AQ5JUQ0 283 aa13.47□□□□□ -0.25
CPSF4-208ENST00000452047 CYP4A22Q5TCH4 519 aa13.47□□□□□ -0.25
CPSF4-208ENST00000452047 ATL3Q6DD88 541 aa13.47□□□□□ -0.25
CPSF4-208ENST00000452047 TANGO2Q6ICL3 276 aa13.47□□□□□ -0.25
CPSF4-208ENST00000452047 ARMCX5Q6P1M9 558 aa13.47□□□□□ -0.25
CPSF4-208ENST00000452047 EPM2AIP1Q7L775 607 aaPredicted RBP13.47□□□□□ -0.25
CPSF4-208ENST00000452047 C1orf127Q8N9H9 656 aa13.47□□□□□ -0.25
CPSF4-208ENST00000452047 DTWD2Q8NBA8 298 aa13.47□□□□□ -0.25
CPSF4-208ENST00000452047 ELSPBP1Q96BH3 223 aa13.47□□□□□ -0.25
CPSF4-208ENST00000452047 FAM84AQ96KN4 292 aa13.47□□□□□ -0.25
CPSF4-208ENST00000452047 ZSWIM3Q96MP5 696 aa13.47□□□□□ -0.25
CPSF4-208ENST00000452047 ZNF560Q96MR9 790 aa13.47□□□□□ -0.25
CPSF4-208ENST00000452047 ASB16Q96NS5 453 aa13.47□□□□□ -0.25
CPSF4-208ENST00000452047 PYM1Q9BRP8 204 aaKnown RBP13.47□□□□□ -0.25
CPSF4-208ENST00000452047 DDX23Q9BUQ8 820 aaKnown RBP13.47□□□□□ -0.25
CPSF4-208ENST00000452047 LRRC27Q9C0I9 530 aa13.47□□□□□ -0.25
CPSF4-208ENST00000452047 ZCWPW1Q9H0M4 648 aa13.47□□□□□ -0.25
CPSF4-208ENST00000452047 ASAH2Q9NR71 780 aa13.47□□□□□ -0.25
CPSF4-208ENST00000452047 HSFX1Q9UBD0 423 aa13.47□□□□□ -0.25
CPSF4-208ENST00000452047 PCDHA7Q9UN72 937 aa13.47□□□□□ -0.25
CPSF4-208ENST00000452047 NUP210Q8TEM1 1887 aaPredicted RBP13.46□□□□□ -0.25
CPSF4-208ENST00000452047 PATJQ8NI35 1801 aa13.46□□□□□ -0.25
CPSF4-208ENST00000452047 PROB1E7EW31 1015 aa13.46□□□□□ -0.25
CPSF4-208ENST00000452047 STK25O00506 426 aa13.46□□□□□ -0.25
CPSF4-208ENST00000452047 KIAA0391O15091 583 aaKnown RBP13.46□□□□□ -0.25
CPSF4-208ENST00000452047 EIF3DO15371 548 aaKnown RBP eCLIP13.46□□□□□ -0.25
CPSF4-208ENST00000452047 POLR2DO15514 142 aaKnown RBP13.46□□□□□ -0.25
CPSF4-208ENST00000452047 ITGB3P05106 788 aa13.46□□□□□ -0.25
CPSF4-208ENST00000452047 GJA1P17302 382 aa13.46□□□□□ -0.25
CPSF4-208ENST00000452047 RFX1P22670 979 aa13.46□□□□□ -0.25
CPSF4-208ENST00000452047 POLR2BP30876 1174 aaKnown RBP13.46□□□□□ -0.25
CPSF4-208ENST00000452047 ASIC1P78348 528 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms