RNA–Protein interactions for RNA: ENST00000451716.5

COL27A1-202, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL27A1, Length 2,865 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-202ENST00000451716 KCTD2Q14681 263 aa12.83□□□□□ -0.36
COL27A1-202ENST00000451716 PLCB4Q15147 1175 aa12.83□□□□□ -0.36
COL27A1-202ENST00000451716 PPP1R7Q15435 360 aa12.83□□□□□ -0.36
COL27A1-202ENST00000451716 CLUL1Q15846 466 aa12.83□□□□□ -0.36
COL27A1-202ENST00000451716 MAPK6Q16659 721 aa12.83□□□□□ -0.36
COL27A1-202ENST00000451716 ZNF677Q86XU0 584 aa12.83□□□□□ -0.36
COL27A1-202ENST00000451716 BRSK2Q8IWQ3 736 aa12.83□□□□□ -0.36
COL27A1-202ENST00000451716 TMEM192Q8IY95 271 aa12.83□□□□□ -0.36
COL27A1-202ENST00000451716 ZNF606Q8WXB4 792 aa12.83□□□□□ -0.36
COL27A1-202ENST00000451716 RNF25Q96BH1 459 aaPredicted RBP12.83□□□□□ -0.36
COL27A1-202ENST00000451716 OPTNQ96CV9 577 aa12.83□□□□□ -0.36
COL27A1-202ENST00000451716 CDCA5Q96FF9 252 aa12.83□□□□□ -0.36
COL27A1-202ENST00000451716 MMP19Q99542 508 aa12.83□□□□□ -0.36
COL27A1-202ENST00000451716 FHDC1Q9C0D6 1143 aaPredicted RBP12.83□□□□□ -0.36
COL27A1-202ENST00000451716 FAM107BQ9H098 131 aa12.83□□□□□ -0.36
COL27A1-202ENST00000451716 CCDC113Q9H0I3 377 aa12.83□□□□□ -0.36
COL27A1-202ENST00000451716 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.83□□□□□ -0.36
COL27A1-202ENST00000451716 TLDC2A0PJX2 215 aa12.82□□□□□ -0.36
COL27A1-202ENST00000451716 ERLIN2O94905 339 aa12.82□□□□□ -0.36
COL27A1-202ENST00000451716 SNUPNO95149 360 aaKnown RBP12.82□□□□□ -0.36
COL27A1-202ENST00000451716 CYP2C8P10632 490 aa12.82□□□□□ -0.36
COL27A1-202ENST00000451716 TCF4P15884 667 aa12.82□□□□□ -0.36
COL27A1-202ENST00000451716 MAGOHP61326 146 aaKnown RBP12.82□□□□□ -0.36
COL27A1-202ENST00000451716 ATP13A4Q4VNC1 1196 aa12.82□□□□□ -0.36
COL27A1-202ENST00000451716 ANKS1BQ7Z6G8 1248 aa12.82□□□□□ -0.36
COL27A1-202ENST00000451716 MYLK4Q86YV6 388 aaPredicted RBP12.82□□□□□ -0.36
COL27A1-202ENST00000451716 EXOC8Q8IYI6 725 aa12.82□□□□□ -0.36
COL27A1-202ENST00000451716 ANKRD13AQ8IZ07 590 aa12.82□□□□□ -0.36
COL27A1-202ENST00000451716 DDX27Q96GQ7 796 aaKnown RBP12.82□□□□□ -0.36
COL27A1-202ENST00000451716 IMPG2Q9BZV3 1241 aa12.82□□□□□ -0.36
COL27A1-202ENST00000451716 MINDY3Q9H8M7 445 aa12.82□□□□□ -0.36
COL27A1-202ENST00000451716 AVENQ9NQS1 362 aaPredicted RBP12.82□□□□□ -0.36
COL27A1-202ENST00000451716 DNAJC17Q9NVM6 304 aaKnown RBP12.82□□□□□ -0.36
COL27A1-202ENST00000451716 AGTPBP1Q9UPW5 1226 aa12.82□□□□□ -0.36
COL27A1-202ENST00000451716 LOC285556D6RIA3 1793 aa12.82□□□□□ -0.36
COL27A1-202ENST00000451716 CAPN15O75808 1086 aa12.82□□□□□ -0.36
COL27A1-202ENST00000451716 TXNP10599 105 aaKnown RBP12.82□□□□□ -0.36
COL27A1-202ENST00000451716 SLC29A2Q14542 456 aa12.82□□□□□ -0.36
COL27A1-202ENST00000451716 CYP1B1Q16678 543 aa12.82□□□□□ -0.36
COL27A1-202ENST00000451716 IER5Q5VY09 327 aa12.82□□□□□ -0.36
COL27A1-202ENST00000451716 EEF1DP3Q658K8 133 aa12.82□□□□□ -0.36
COL27A1-202ENST00000451716 KCNV1Q6PIU1 500 aa12.82□□□□□ -0.36
COL27A1-202ENST00000451716 ZPBP2Q6X784 338 aa12.82□□□□□ -0.36
COL27A1-202ENST00000451716 FAM81BQ96LP2 452 aa12.82□□□□□ -0.36
COL27A1-202ENST00000451716 RNPEPQ9H4A4 650 aa12.82□□□□□ -0.36
COL27A1-202ENST00000451716 CEP350Q5VT06 3117 aa12.81□□□□□ -0.36
COL27A1-202ENST00000451716 A0A087WUV0 522 aaPredicted RBP12.81□□□□□ -0.36
COL27A1-202ENST00000451716 SPDYE5A6NIY4 337 aa12.81□□□□□ -0.36
COL27A1-202ENST00000451716 PODXLO00592 558 aa12.81□□□□□ -0.36
COL27A1-202ENST00000451716 FSCN2O14926 492 aa12.81□□□□□ -0.36
COL27A1-202ENST00000451716 PROSCO94903 275 aa12.81□□□□□ -0.36
COL27A1-202ENST00000451716 ASS1P00966 412 aaKnown RBP12.81□□□□□ -0.36
COL27A1-202ENST00000451716 IQCF3P0C7M6 154 aa12.81□□□□□ -0.36
COL27A1-202ENST00000451716 RALAP11233 206 aa12.81□□□□□ -0.36
COL27A1-202ENST00000451716 TBXAS1P24557 533 aaPredicted RBP12.81□□□□□ -0.36
COL27A1-202ENST00000451716 MDH1P40925 334 aaKnown RBP12.81□□□□□ -0.36
COL27A1-202ENST00000451716 EFNA5P52803 228 aa12.81□□□□□ -0.36
COL27A1-202ENST00000451716 KRT17Q04695 432 aa12.81□□□□□ -0.36
COL27A1-202ENST00000451716 ORC1Q13415 861 aa12.81□□□□□ -0.36
COL27A1-202ENST00000451716 PRUNE1Q86TP1 453 aa12.81□□□□□ -0.36
COL27A1-202ENST00000451716 PPANQ9NQ55 473 aaKnown RBP12.81□□□□□ -0.36
COL27A1-202ENST00000451716 DNAH12Q6ZR08 3092 aa12.81□□□□□ -0.36
COL27A1-202ENST00000451716 EVPLQ92817 2033 aa12.81□□□□□ -0.36
COL27A1-202ENST00000451716 PI4K2BG5E9Z4 385 aa12.81□□□□□ -0.36
COL27A1-202ENST00000451716 NDUFAB1O14561 156 aa12.81□□□□□ -0.36
COL27A1-202ENST00000451716 ABLIM1O14639 778 aa12.81□□□□□ -0.36
COL27A1-202ENST00000451716 OGTO15294 1046 aa12.81□□□□□ -0.36
COL27A1-202ENST00000451716 TLR3O15455 904 aaKnown RBP12.81□□□□□ -0.36
COL27A1-202ENST00000451716 MYBL1P10243 752 aa12.81□□□□□ -0.36
COL27A1-202ENST00000451716 SLCO1A2P46721 670 aa12.81□□□□□ -0.36
COL27A1-202ENST00000451716 DRG2P55039 364 aaKnown RBP12.81□□□□□ -0.36
COL27A1-202ENST00000451716 MOGSQ13724 837 aa12.81□□□□□ -0.36
COL27A1-202ENST00000451716 PDCD2Q16342 344 aaPredicted RBP12.81□□□□□ -0.36
COL27A1-202ENST00000451716 SLC5A9Q2M3M2 681 aa12.81□□□□□ -0.36
COL27A1-202ENST00000451716 LIN9Q5TKA1 542 aa12.81□□□□□ -0.36
COL27A1-202ENST00000451716 EFCAB12Q6NXP0 572 aa12.81□□□□□ -0.36
COL27A1-202ENST00000451716 RUFY4Q6ZNE9 571 aa12.81□□□□□ -0.36
COL27A1-202ENST00000451716 ZBTB8OSQ8IWT0 167 aa12.81□□□□□ -0.36
COL27A1-202ENST00000451716 DRAXINQ8NBI3 349 aaPredicted RBP12.81□□□□□ -0.36
COL27A1-202ENST00000451716 C1orf131Q8NDD1 294 aaKnown RBP12.81□□□□□ -0.36
COL27A1-202ENST00000451716 ACSF2Q96CM8 615 aaPredicted RBP12.81□□□□□ -0.36
COL27A1-202ENST00000451716 FAM167AQ96KS9 214 aa12.81□□□□□ -0.36
COL27A1-202ENST00000451716 PABPC3Q9H361 631 aaKnown RBP12.81□□□□□ -0.36
COL27A1-202ENST00000451716 CISHQ9NSE2 258 aa12.81□□□□□ -0.36
COL27A1-202ENST00000451716 NXF1Q9UBU9 619 aaKnown RBP12.81□□□□□ -0.36
COL27A1-202ENST00000451716 CXCL11O14625 94 aa12.8□□□□□ -0.36
COL27A1-202ENST00000451716 SLC25A27O95847 323 aa12.8□□□□□ -0.36
COL27A1-202ENST00000451716 RAP1GAPP47736 663 aa12.8□□□□□ -0.36
COL27A1-202ENST00000451716 PTP4A2Q12974 167 aa12.8□□□□□ -0.36
COL27A1-202ENST00000451716 MKRN3Q13064 507 aaKnown RBP12.8□□□□□ -0.36
COL27A1-202ENST00000451716 MXD4Q14582 209 aaPredicted RBP12.8□□□□□ -0.36
COL27A1-202ENST00000451716 ZNF568Q3ZCX4 644 aa12.8□□□□□ -0.36
COL27A1-202ENST00000451716 ZFYVE27Q5T4F4 411 aa12.8□□□□□ -0.36
COL27A1-202ENST00000451716 WDR49Q8IV35 697 aa12.8□□□□□ -0.36
COL27A1-202ENST00000451716 CCDC114Q96M63 670 aa12.8□□□□□ -0.36
COL27A1-202ENST00000451716 PWWP2AQ96N64 755 aa12.8□□□□□ -0.36
COL27A1-202ENST00000451716 LRRC19Q9H756 370 aa12.8□□□□□ -0.36
COL27A1-202ENST00000451716 ASIC3Q9UHC3 531 aa12.8□□□□□ -0.36
COL27A1-202ENST00000451716 BLOC1S6Q9UL45 172 aa12.8□□□□□ -0.36
COL27A1-202ENST00000451716 PASKQ96RG2 1323 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms