RNA–Protein interactions for RNA: ENST00000449049.7

SHMT2-203, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 2,121 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-203ENST00000449049 MRPL42Q9Y6G3 142 aaKnown RBP15.05■□□□□ 0
SHMT2-203ENST00000449049 TSC2P49815 1807 aa15.05■□□□□ 0
SHMT2-203ENST00000449049 F8W810 466 aa15.05■□□□□ -0
SHMT2-203ENST00000449049 DPH6Q7L8W6 267 aa15.05■□□□□ -0
SHMT2-203ENST00000449049 TOP6BLQ8N6T0 577 aa15.05■□□□□ -0
SHMT2-203ENST00000449049 SYN2Q92777 582 aaPredicted RBP15.05■□□□□ -0
SHMT2-203ENST00000449049 RAD9AQ99638 391 aa15.05■□□□□ -0
SHMT2-203ENST00000449049 ZBED2Q9BTP6 218 aa15.05■□□□□ -0
SHMT2-203ENST00000449049 COLEC11Q9BWP8 271 aa15.05■□□□□ -0
SHMT2-203ENST00000449049 CNTN6Q9UQ52 1028 aa15.05■□□□□ -0
SHMT2-203ENST00000449049 FAN1Q9Y2M0 1017 aa15.05■□□□□ -0
SHMT2-203ENST00000449049 PRG3Q9Y2Y8 225 aaPredicted RBP15.05■□□□□ -0
SHMT2-203ENST00000449049 M0QZQ0 153 aa15.04■□□□□ -0
SHMT2-203ENST00000449049 HNRNPH3P31942 346 aaKnown RBP15.04■□□□□ -0
SHMT2-203ENST00000449049 SOX5P35711 763 aa15.04■□□□□ -0
SHMT2-203ENST00000449049 STAT1P42224 750 aa15.04■□□□□ -0
SHMT2-203ENST00000449049 YWHAEP62258 255 aaKnown RBP15.04■□□□□ -0
SHMT2-203ENST00000449049 SOWAHAQ2M3V2 549 aa15.04■□□□□ -0
SHMT2-203ENST00000449049 TIGD5Q53EQ6 642 aa15.04■□□□□ -0
SHMT2-203ENST00000449049 OR8K1Q8NGG5 319 aa15.04■□□□□ -0
SHMT2-203ENST00000449049 SENP8Q96LD8 212 aa15.04■□□□□ -0
SHMT2-203ENST00000449049 MMS19Q96T76 1030 aa15.04■□□□□ -0
SHMT2-203ENST00000449049 UBE2OQ9C0C9 1292 aaKnown RBP15.04■□□□□ -0
SHMT2-203ENST00000449049 AIPL1Q9NZN9 384 aa15.04■□□□□ -0
SHMT2-203ENST00000449049 CARNS1A5YM72 827 aa15.04■□□□□ -0
SHMT2-203ENST00000449049 FOXN3O00409 490 aaPredicted RBP15.04■□□□□ -0
SHMT2-203ENST00000449049 CYB561D2O14569 222 aa15.04■□□□□ -0
SHMT2-203ENST00000449049 TACC1O75410 805 aa15.04■□□□□ -0
SHMT2-203ENST00000449049 WEE2P0C1S8 567 aa15.04■□□□□ -0
SHMT2-203ENST00000449049 FAM163BP0C2L3 166 aa15.04■□□□□ -0
SHMT2-203ENST00000449049 LAG3P18627 525 aa15.04■□□□□ -0
SHMT2-203ENST00000449049 BRCC3P46736 316 aa15.04■□□□□ -0
SHMT2-203ENST00000449049 RAP1GAPP47736 663 aa15.04■□□□□ -0
SHMT2-203ENST00000449049 CDH8P55286 799 aa15.04■□□□□ -0
SHMT2-203ENST00000449049 INCA1Q0VD86 236 aa15.04■□□□□ -0
SHMT2-203ENST00000449049 SFMBT2Q5VUG0 894 aa15.04■□□□□ -0
SHMT2-203ENST00000449049 FMNL3Q8IVF7 1028 aa15.04■□□□□ -0
SHMT2-203ENST00000449049 FAM71AQ8IYT1 594 aa15.04■□□□□ -0
SHMT2-203ENST00000449049 TTC39CQ8N584 583 aa15.04■□□□□ -0
SHMT2-203ENST00000449049 APPL2Q8NEU8 664 aa15.04■□□□□ -0
SHMT2-203ENST00000449049 HASPINQ8TF76 798 aa15.04■□□□□ -0
SHMT2-203ENST00000449049 SUSD3Q96L08 255 aa15.04■□□□□ -0
SHMT2-203ENST00000449049 PANX2Q96RD6 677 aa15.04■□□□□ -0
SHMT2-203ENST00000449049 CISHQ9NSE2 258 aa15.04■□□□□ -0
SHMT2-203ENST00000449049 ADAM28Q9UKQ2 775 aa15.04■□□□□ -0
SHMT2-203ENST00000449049 L1RE1Q9UN81 338 aa15.04■□□□□ -0
SHMT2-203ENST00000449049 TLL1O43897 1013 aa15.03■□□□□ -0
SHMT2-203ENST00000449049 HUS1O60921 280 aa15.03■□□□□ -0
SHMT2-203ENST00000449049 LINC00271P0C7V0 271 aa15.03■□□□□ -0
SHMT2-203ENST00000449049 PNMA6AP0CW24 399 aaPredicted RBP15.03■□□□□ -0
SHMT2-203ENST00000449049 ALDH7A1P49419 539 aaKnown RBP15.03■□□□□ -0
SHMT2-203ENST00000449049 E4F1Q66K89 784 aaPredicted RBP15.03■□□□□ -0
SHMT2-203ENST00000449049 DSTYKQ6XUX3 929 aa15.03■□□□□ -0
SHMT2-203ENST00000449049 PDCL2Q8N4E4 241 aa15.03■□□□□ -0
SHMT2-203ENST00000449049 FIBCD1Q8N539 461 aa15.03■□□□□ -0
SHMT2-203ENST00000449049 TADA2AO75478 443 aa15.02■□□□□ -0
SHMT2-203ENST00000449049 CD58P19256 250 aa15.02■□□□□ -0
SHMT2-203ENST00000449049 BMP8BP34820 402 aa15.02■□□□□ -0
SHMT2-203ENST00000449049 PBX3P40426 434 aa15.02■□□□□ -0
SHMT2-203ENST00000449049 ZNF132P52740 706 aa15.02■□□□□ -0
SHMT2-203ENST00000449049 KCNT2Q6UVM3 1135 aa15.02■□□□□ -0
SHMT2-203ENST00000449049 TMEM173Q86WV6 379 aaPredicted RBP15.02■□□□□ -0
SHMT2-203ENST00000449049 COLGALT1Q8NBJ5 622 aa15.02■□□□□ -0
SHMT2-203ENST00000449049 SPATA18Q8TC71 538 aa15.02■□□□□ -0
SHMT2-203ENST00000449049 KBTBD7Q8WVZ9 684 aa15.02■□□□□ -0
SHMT2-203ENST00000449049 ZNF558Q96NG5 402 aa15.02■□□□□ -0
SHMT2-203ENST00000449049 MRPL45Q9BRJ2 306 aaKnown RBP15.02■□□□□ -0
SHMT2-203ENST00000449049 PCDHB8Q9UN66 801 aa15.02■□□□□ -0
SHMT2-203ENST00000449049 PCDHB4Q9Y5E5 795 aa15.02■□□□□ -0
SHMT2-203ENST00000449049 ARHGEF37A1IGU5 675 aa15.02□□□□□ -0.01
SHMT2-203ENST00000449049 NT5C1B-RDH14C9J2C7 533 aa15.02□□□□□ -0.01
SHMT2-203ENST00000449049 I3L4J1 428 aa15.02□□□□□ -0.01
SHMT2-203ENST00000449049 TRAPPC3O43617 180 aa15.02□□□□□ -0.01
SHMT2-203ENST00000449049 CILPO75339 1184 aa15.02□□□□□ -0.01
SHMT2-203ENST00000449049 GFPT2O94808 682 aa15.02□□□□□ -0.01
SHMT2-203ENST00000449049 EFEMP2O95967 443 aa15.02□□□□□ -0.01
SHMT2-203ENST00000449049 CYP11A1P05108 521 aa15.02□□□□□ -0.01
SHMT2-203ENST00000449049 ODC1P11926 461 aa15.02□□□□□ -0.01
SHMT2-203ENST00000449049 FERP16591 822 aa15.02□□□□□ -0.01
SHMT2-203ENST00000449049 FECHP22830 423 aa15.02□□□□□ -0.01
SHMT2-203ENST00000449049 WARSP23381 471 aaKnown RBP15.02□□□□□ -0.01
SHMT2-203ENST00000449049 MEA1Q16626 185 aa15.02□□□□□ -0.01
SHMT2-203ENST00000449049 WDR59Q6PJI9 974 aa15.02□□□□□ -0.01
SHMT2-203ENST00000449049 ADGRF2Q8IZF7 708 aa15.02□□□□□ -0.01
SHMT2-203ENST00000449049 SLC39A11Q8N1S5 342 aa15.02□□□□□ -0.01
SHMT2-203ENST00000449049 TMEM86AQ8N2M4 240 aa15.02□□□□□ -0.01
SHMT2-203ENST00000449049 BCL7CQ8WUZ0 217 aaPredicted RBP15.02□□□□□ -0.01
SHMT2-203ENST00000449049 CLP1Q92989 425 aaKnown RBP15.02□□□□□ -0.01
SHMT2-203ENST00000449049 BARX2Q9UMQ3 279 aaPredicted RBP15.02□□□□□ -0.01
SHMT2-203ENST00000449049 PTMAP06454 111 aaKnown RBP15.01□□□□□ -0.01
SHMT2-203ENST00000449049 KRT5P13647 590 aa15.01□□□□□ -0.01
SHMT2-203ENST00000449049 TYMPP19971 482 aa15.01□□□□□ -0.01
SHMT2-203ENST00000449049 ASIC2Q16515 512 aa15.01□□□□□ -0.01
SHMT2-203ENST00000449049 SPOUT1Q5T280 376 aaKnown RBP15.01□□□□□ -0.01
SHMT2-203ENST00000449049 TMEM270Q6UE05 265 aa15.01□□□□□ -0.01
SHMT2-203ENST00000449049 IRF2BP2Q7Z5L9 587 aa15.01□□□□□ -0.01
SHMT2-203ENST00000449049 RBBP8NLQ8NC74 664 aaPredicted RBP15.01□□□□□ -0.01
SHMT2-203ENST00000449049 WHAMMQ8TF30 809 aa15.01□□□□□ -0.01
SHMT2-203ENST00000449049 IGSF21Q96ID5 467 aa15.01□□□□□ -0.01
SHMT2-203ENST00000449049 DSEQ9UL01 958 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms