RNA–Protein interactions for RNA: ENST00000448872.6

RCL1-208, Transcript of RNA terminal phosphate cyclase like 1, humanhuman

TSL 1 (best) BASIC

Gene RCL1, Length 1,459 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1-208ENST00000448872 GDAP2Q9NXN4 497 aa12.72□□□□□ -0.37
RCL1-208ENST00000448872 AJAP1Q9UKB5 411 aaPredicted RBP12.72□□□□□ -0.37
RCL1-208ENST00000448872 GTPBP10A4D1E9 387 aaKnown RBP12.72□□□□□ -0.37
RCL1-208ENST00000448872 H3BNC9 293 aa12.72□□□□□ -0.37
RCL1-208ENST00000448872 M0QZQ0 153 aa12.72□□□□□ -0.37
RCL1-208ENST00000448872 C2CD2LO14523 706 aa12.72□□□□□ -0.37
RCL1-208ENST00000448872 EPHB6O15197 1021 aa12.72□□□□□ -0.37
RCL1-208ENST00000448872 STAU1O95793 577 aaKnown RBP12.72□□□□□ -0.37
RCL1-208ENST00000448872 RB1P06400 928 aa12.72□□□□□ -0.37
RCL1-208ENST00000448872 WEE2P0C1S8 567 aa12.72□□□□□ -0.37
RCL1-208ENST00000448872 FGFR3P22607 806 aa12.72□□□□□ -0.37
RCL1-208ENST00000448872 IRS1P35568 1242 aa12.72□□□□□ -0.37
RCL1-208ENST00000448872 NUBP1P53384 320 aa12.72□□□□□ -0.37
RCL1-208ENST00000448872 ERVFC1P60507 584 aa12.72□□□□□ -0.37
RCL1-208ENST00000448872 TNNC1P63316 161 aa12.72□□□□□ -0.37
RCL1-208ENST00000448872 KRT17Q04695 432 aa12.72□□□□□ -0.37
RCL1-208ENST00000448872 CETN1Q12798 172 aa12.72□□□□□ -0.37
RCL1-208ENST00000448872 GSE1Q14687 1217 aa12.72□□□□□ -0.37
RCL1-208ENST00000448872 ZNF667Q5HYK9 610 aa12.72□□□□□ -0.37
RCL1-208ENST00000448872 WDR44Q5JSH3 913 aa12.72□□□□□ -0.37
RCL1-208ENST00000448872 HABP4Q5JVS0 413 aaKnown RBP12.72□□□□□ -0.37
RCL1-208ENST00000448872 FKBP15Q5T1M5 1219 aa12.72□□□□□ -0.37
RCL1-208ENST00000448872 PRSS55Q6UWB4 352 aaPredicted RBP12.72□□□□□ -0.37
RCL1-208ENST00000448872 PDCL2Q8N4E4 241 aa12.72□□□□□ -0.37
RCL1-208ENST00000448872 FAM161BQ96MY7 647 aa12.72□□□□□ -0.37
RCL1-208ENST00000448872 SAMD11Q96NU1 681 aa12.72□□□□□ -0.37
RCL1-208ENST00000448872 HERC2P3Q9BVR0 1158 aa12.72□□□□□ -0.37
RCL1-208ENST00000448872 IMPG2Q9BZV3 1241 aa12.72□□□□□ -0.37
RCL1-208ENST00000448872 NIF3L1Q9GZT8 377 aa12.72□□□□□ -0.37
RCL1-208ENST00000448872 PCDHB8Q9UN66 801 aa12.72□□□□□ -0.37
RCL1-208ENST00000448872 SIK3Q9Y2K2 1263 aa12.72□□□□□ -0.37
RCL1-208ENST00000448872 NME7Q9Y5B8 376 aa12.72□□□□□ -0.37
RCL1-208ENST00000448872 SZT2Q5T011 3432 aa12.71□□□□□ -0.37
RCL1-208ENST00000448872 TRAPPC3O43617 180 aa12.71□□□□□ -0.38
RCL1-208ENST00000448872 LPXNO60711 386 aa12.71□□□□□ -0.38
RCL1-208ENST00000448872 SOD2P04179 222 aa12.71□□□□□ -0.38
RCL1-208ENST00000448872 CDR1P51861 262 aa12.71□□□□□ -0.38
RCL1-208ENST00000448872 GRIN2CQ14957 1233 aa12.71□□□□□ -0.38
RCL1-208ENST00000448872 FILIP1LQ4L180 1135 aa12.71□□□□□ -0.38
RCL1-208ENST00000448872 LIMS2Q7Z4I7 341 aa12.71□□□□□ -0.38
RCL1-208ENST00000448872 OSTM1Q86WC4 334 aa12.71□□□□□ -0.38
RCL1-208ENST00000448872 CCDC150Q8NCX0 1101 aa12.71□□□□□ -0.38
RCL1-208ENST00000448872 KBTBD7Q8WVZ9 684 aa12.71□□□□□ -0.38
RCL1-208ENST00000448872 TAF4BQ92750 862 aa12.71□□□□□ -0.38
RCL1-208ENST00000448872 NT5C1BQ96P26 610 aa12.71□□□□□ -0.38
RCL1-208ENST00000448872 TCF25Q9BQ70 676 aa12.71□□□□□ -0.38
RCL1-208ENST00000448872 ZBP1Q9H171 429 aa12.71□□□□□ -0.38
RCL1-208ENST00000448872 PRDM12Q9H4Q4 367 aa12.71□□□□□ -0.38
RCL1-208ENST00000448872 CHST7Q9NS84 486 aa12.71□□□□□ -0.38
RCL1-208ENST00000448872 FAM207AQ9NSI2 230 aaPredicted RBP12.71□□□□□ -0.38
RCL1-208ENST00000448872 HUS1O60921 280 aa12.7□□□□□ -0.38
RCL1-208ENST00000448872 NOL4O94818 638 aa12.7□□□□□ -0.38
RCL1-208ENST00000448872 ODC1P11926 461 aa12.7□□□□□ -0.38
RCL1-208ENST00000448872 RPL17P18621 184 aaKnown RBP12.7□□□□□ -0.38
RCL1-208ENST00000448872 CD58P19256 250 aa12.7□□□□□ -0.38
RCL1-208ENST00000448872 LMO2P25791 158 aa12.7□□□□□ -0.38
RCL1-208ENST00000448872 ORC1Q13415 861 aa12.7□□□□□ -0.38
RCL1-208ENST00000448872 CUL2Q13617 745 aa12.7□□□□□ -0.38
RCL1-208ENST00000448872 USP41Q3LFD5 358 aa12.7□□□□□ -0.38
RCL1-208ENST00000448872 VARS2Q5ST30 1063 aaKnown RBP12.7□□□□□ -0.38
RCL1-208ENST00000448872 KIAA0319Q5VV43 1072 aa12.7□□□□□ -0.38
RCL1-208ENST00000448872 PLPP4Q5VZY2 271 aa12.7□□□□□ -0.38
RCL1-208ENST00000448872 RSPO2Q6UXX9 243 aaPredicted RBP12.7□□□□□ -0.38
RCL1-208ENST00000448872 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.7□□□□□ -0.38
RCL1-208ENST00000448872 ADGRF2Q8IZF7 708 aa12.7□□□□□ -0.38
RCL1-208ENST00000448872 PPM1KQ8N3J5 372 aa12.7□□□□□ -0.38
RCL1-208ENST00000448872 TOP6BLQ8N6T0 577 aa12.7□□□□□ -0.38
RCL1-208ENST00000448872 APPL2Q8NEU8 664 aa12.7□□□□□ -0.38
RCL1-208ENST00000448872 RIN2Q8WYP3 895 aaPredicted RBP12.7□□□□□ -0.38
RCL1-208ENST00000448872 PCMTD1Q96MG8 357 aaPredicted RBP12.7□□□□□ -0.38
RCL1-208ENST00000448872 KREMEN1Q96MU8 473 aa12.7□□□□□ -0.38
RCL1-208ENST00000448872 TMEM209Q96SK2 561 aa12.7□□□□□ -0.38
RCL1-208ENST00000448872 RTP3Q9BQQ7 232 aa12.7□□□□□ -0.38
RCL1-208ENST00000448872 TTPALQ9BTX7 342 aa12.7□□□□□ -0.38
RCL1-208ENST00000448872 BCO2Q9BYV7 579 aa12.7□□□□□ -0.38
RCL1-208ENST00000448872 UBE2TQ9NPD8 197 aaPredicted RBP12.7□□□□□ -0.38
RCL1-208ENST00000448872 APEX2Q9UBZ4 518 aa12.7□□□□□ -0.38
RCL1-208ENST00000448872 HMGXB4Q9UGU5 601 aa12.7□□□□□ -0.38
RCL1-208ENST00000448872 PUF60Q9UHX1 559 aaKnown RBP12.7□□□□□ -0.38
RCL1-208ENST00000448872 FHOD1Q9Y613 1164 aa12.7□□□□□ -0.38
RCL1-208ENST00000448872 FNDC1Q4ZHG4 1894 aaPredicted RBP12.7□□□□□ -0.38
RCL1-208ENST00000448872 RALGAPA2Q2PPJ7 1873 aa12.69□□□□□ -0.38
RCL1-208ENST00000448872 HIDE1A8MVS5 230 aa12.69□□□□□ -0.38
RCL1-208ENST00000448872 SYN3O14994 580 aa12.69□□□□□ -0.38
RCL1-208ENST00000448872 ADAM12O43184 909 aa12.69□□□□□ -0.38
RCL1-208ENST00000448872 CYP11A1P05108 521 aa12.69□□□□□ -0.38
RCL1-208ENST00000448872 TYMPP19971 482 aa12.69□□□□□ -0.38
RCL1-208ENST00000448872 ACAT1P24752 427 aaKnown RBP12.69□□□□□ -0.38
RCL1-208ENST00000448872 CA8P35219 290 aa12.69□□□□□ -0.38
RCL1-208ENST00000448872 PBX1P40424 430 aa12.69□□□□□ -0.38
RCL1-208ENST00000448872 GLUD2P49448 558 aa12.69□□□□□ -0.38
RCL1-208ENST00000448872 DSG1Q02413 1049 aa12.69□□□□□ -0.38
RCL1-208ENST00000448872 YWHAHQ04917 246 aaPredicted RBP12.69□□□□□ -0.38
RCL1-208ENST00000448872 ELAVL2Q12926 359 aaKnown RBP12.69□□□□□ -0.38
RCL1-208ENST00000448872 PTPN14Q15678 1187 aa12.69□□□□□ -0.38
RCL1-208ENST00000448872 CCDC142Q17RM4 750 aa12.69□□□□□ -0.38
RCL1-208ENST00000448872 KLHDC7AQ5VTJ3 777 aa12.69□□□□□ -0.38
RCL1-208ENST00000448872 IQCEQ6IPM2 695 aa12.69□□□□□ -0.38
RCL1-208ENST00000448872 KIAA1841Q6NSI8 718 aa12.69□□□□□ -0.38
RCL1-208ENST00000448872 SARM1Q6SZW1 724 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms