RNA–Protein interactions for RNA: ENST00000448416.6

SYNPO2-204, Transcript of synaptopodin 2, humanhuman

TSL 2 BASIC

Gene SYNPO2, Length 4,298 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-204ENST00000448416 ARMCX6Q7L4S7 300 aa9.93□□□□□ -0.82
SYNPO2-204ENST00000448416 RELL1Q8IUW5 271 aa9.93□□□□□ -0.82
SYNPO2-204ENST00000448416 FNDC8Q8TC99 324 aa9.93□□□□□ -0.82
SYNPO2-204ENST00000448416 TCP10LQ8TDR4 215 aa9.93□□□□□ -0.82
SYNPO2-204ENST00000448416 HAS1Q92839 578 aa9.93□□□□□ -0.82
SYNPO2-204ENST00000448416 DCLK3Q9C098 648 aa9.93□□□□□ -0.82
SYNPO2-204ENST00000448416 GRIP2Q9C0E4 1043 aa9.93□□□□□ -0.82
SYNPO2-204ENST00000448416 INTS2Q9H0H0 1204 aaKnown RBP9.93□□□□□ -0.82
SYNPO2-204ENST00000448416 KCNK13Q9HB14 408 aa9.93□□□□□ -0.82
SYNPO2-204ENST00000448416 S100A14Q9HCY8 104 aa9.93□□□□□ -0.82
SYNPO2-204ENST00000448416 MYH11P35749 1972 aa9.92□□□□□ -0.82
SYNPO2-204ENST00000448416 ARHGAP42A6NI28 874 aa9.92□□□□□ -0.82
SYNPO2-204ENST00000448416 DKC1O60832 514 aaKnown RBP eCLIP9.92□□□□□ -0.82
SYNPO2-204ENST00000448416 CAMTA2O94983 1202 aa9.92□□□□□ -0.82
SYNPO2-204ENST00000448416 GCNT3O95395 438 aa9.92□□□□□ -0.82
SYNPO2-204ENST00000448416 ADAMTS2O95450 1211 aa9.92□□□□□ -0.82
SYNPO2-204ENST00000448416 PSMD7P51665 324 aa9.92□□□□□ -0.82
SYNPO2-204ENST00000448416 ADCY7P51828 1080 aa9.92□□□□□ -0.82
SYNPO2-204ENST00000448416 HIRAP54198 1017 aaPredicted RBP9.92□□□□□ -0.82
SYNPO2-204ENST00000448416 TBL3Q12788 808 aaKnown RBP9.92□□□□□ -0.82
SYNPO2-204ENST00000448416 KIF22Q14807 665 aa9.92□□□□□ -0.82
SYNPO2-204ENST00000448416 UGT2A3Q6UWM9 527 aa9.92□□□□□ -0.82
SYNPO2-204ENST00000448416 NSMFQ6X4W1 530 aa9.92□□□□□ -0.82
SYNPO2-204ENST00000448416 GSTA5Q7RTV2 222 aa9.92□□□□□ -0.82
SYNPO2-204ENST00000448416 NUP93Q8N1F7 819 aa9.92□□□□□ -0.82
SYNPO2-204ENST00000448416 ZFP28Q8NHY6 868 aa9.92□□□□□ -0.82
SYNPO2-204ENST00000448416 GDPD5Q8WTR4 605 aa9.92□□□□□ -0.82
SYNPO2-204ENST00000448416 COA7Q96BR5 231 aa9.92□□□□□ -0.82
SYNPO2-204ENST00000448416 ARHGEF4Q9NR80 690 aa9.92□□□□□ -0.82
SYNPO2-204ENST00000448416 FAIMQ9NVQ4 179 aa9.92□□□□□ -0.82
SYNPO2-204ENST00000448416 TBCCD1Q9NVR7 557 aa9.92□□□□□ -0.82
SYNPO2-204ENST00000448416 R3HDM2Q9Y2K5 976 aaKnown RBP9.92□□□□□ -0.82
SYNPO2-204ENST00000448416 GOLGA8RI6L899 631 aa9.92□□□□□ -0.82
SYNPO2-204ENST00000448416 EDIL3O43854 480 aa9.92□□□□□ -0.82
SYNPO2-204ENST00000448416 ADCY3O60266 1144 aa9.92□□□□□ -0.82
SYNPO2-204ENST00000448416 SMIM18P0DKX4 95 aa9.92□□□□□ -0.82
SYNPO2-204ENST00000448416 PSMC2P35998 433 aaKnown RBP9.92□□□□□ -0.82
SYNPO2-204ENST00000448416 NCOA4Q13772 614 aa9.92□□□□□ -0.82
SYNPO2-204ENST00000448416 TRIP10Q15642 601 aa9.92□□□□□ -0.82
SYNPO2-204ENST00000448416 AAGABQ6PD74 315 aa9.92□□□□□ -0.82
SYNPO2-204ENST00000448416 ADGRG6Q86SQ4 1221 aa9.92□□□□□ -0.82
SYNPO2-204ENST00000448416 ALYREFQ86V81 257 aaKnown RBP9.92□□□□□ -0.82
SYNPO2-204ENST00000448416 ICA1LQ8NDH6 482 aa9.92□□□□□ -0.82
SYNPO2-204ENST00000448416 SLC26A7Q8TE54 656 aa9.92□□□□□ -0.82
SYNPO2-204ENST00000448416 FAM118BQ9BPY3 351 aa9.92□□□□□ -0.82
SYNPO2-204ENST00000448416 VPS11Q9H270 941 aa9.92□□□□□ -0.82
SYNPO2-204ENST00000448416 PSMC3IPQ9P2W1 217 aaPredicted RBP9.92□□□□□ -0.82
SYNPO2-204ENST00000448416 PPARGC1AQ9UBK2 798 aaKnown RBP9.92□□□□□ -0.82
SYNPO2-204ENST00000448416 ZNF148Q9UQR1 794 aa9.92□□□□□ -0.82
SYNPO2-204ENST00000448416 ASTN1O14525 1302 aa9.92□□□□□ -0.82
SYNPO2-204ENST00000448416 PORP16435 677 aaPredicted RBP9.92□□□□□ -0.82
SYNPO2-204ENST00000448416 HOXD12P35452 270 aa9.92□□□□□ -0.82
SYNPO2-204ENST00000448416 GRAMD1BQ3KR37 738 aa9.92□□□□□ -0.82
SYNPO2-204ENST00000448416 MFSD4BQ5TF39 518 aa9.92□□□□□ -0.82
SYNPO2-204ENST00000448416 TREML1Q86YW5 311 aa9.92□□□□□ -0.82
SYNPO2-204ENST00000448416 THEMISQ8N1K5 641 aaPredicted RBP9.92□□□□□ -0.82
SYNPO2-204ENST00000448416 GSTCDQ8NEC7 633 aa9.92□□□□□ -0.82
SYNPO2-204ENST00000448416 MKNK1Q9BUB5 465 aa9.92□□□□□ -0.82
SYNPO2-204ENST00000448416 UNC45AQ9H3U1 944 aa9.92□□□□□ -0.82
SYNPO2-204ENST00000448416 DMTF1Q9Y222 760 aa9.92□□□□□ -0.82
SYNPO2-204ENST00000448416 LZTS1Q9Y250 596 aa9.92□□□□□ -0.82
SYNPO2-204ENST00000448416 NEU2Q9Y3R4 380 aa9.92□□□□□ -0.82
SYNPO2-204ENST00000448416 TELO2Q9Y4R8 837 aa9.92□□□□□ -0.82
SYNPO2-204ENST00000448416 COL1A1P02452 1464 aaPredicted RBP9.92□□□□□ -0.82
SYNPO2-204ENST00000448416 ROBO3Q96MS0 1386 aa9.91□□□□□ -0.82
SYNPO2-204ENST00000448416 TMEM247A6NEH6 219 aa9.91□□□□□ -0.82
SYNPO2-204ENST00000448416 DLDP09622 509 aaKnown RBP9.91□□□□□ -0.82
SYNPO2-204ENST00000448416 PEX2P28328 305 aa9.91□□□□□ -0.82
SYNPO2-204ENST00000448416 FOLH1Q04609 750 aa9.91□□□□□ -0.82
SYNPO2-204ENST00000448416 BTKQ06187 659 aa9.91□□□□□ -0.82
SYNPO2-204ENST00000448416 TCEAL1Q15170 157 aa9.91□□□□□ -0.82
SYNPO2-204ENST00000448416 HYIQ5T013 277 aa9.91□□□□□ -0.82
SYNPO2-204ENST00000448416 ZCCHC9Q8N567 271 aaKnown RBP9.91□□□□□ -0.82
SYNPO2-204ENST00000448416 KLF6Q99612 283 aaPredicted RBP9.91□□□□□ -0.82
SYNPO2-204ENST00000448416 C10orf71Q711Q0 1435 aa9.91□□□□□ -0.82
SYNPO2-204ENST00000448416 CICQ96RK0 1608 aaPredicted RBP9.91□□□□□ -0.82
SYNPO2-204ENST00000448416 FAM237BA0A1B0GVD1 139 aa9.91□□□□□ -0.82
SYNPO2-204ENST00000448416 ESYT2A0FGR8 921 aa9.91□□□□□ -0.82
SYNPO2-204ENST00000448416 TRMUO75648 421 aaKnown RBP9.91□□□□□ -0.82
SYNPO2-204ENST00000448416 STARD3NLO95772 234 aa9.91□□□□□ -0.82
SYNPO2-204ENST00000448416 TRIM49P0CI25 452 aa9.91□□□□□ -0.82
SYNPO2-204ENST00000448416 TRIM49CP0CI26 452 aa9.91□□□□□ -0.82
SYNPO2-204ENST00000448416 PCSK6P29122 969 aa9.91□□□□□ -0.82
SYNPO2-204ENST00000448416 XIAPP98170 497 aa9.91□□□□□ -0.82
SYNPO2-204ENST00000448416 KCNA1Q09470 495 aa9.91□□□□□ -0.82
SYNPO2-204ENST00000448416 CBWD6Q4V339 395 aa9.91□□□□□ -0.82
SYNPO2-204ENST00000448416 CBWD3Q5JTY5 395 aa9.91□□□□□ -0.82
SYNPO2-204ENST00000448416 CBWD5Q5RIA9 395 aa9.91□□□□□ -0.82
SYNPO2-204ENST00000448416 PTF1AQ7RTS3 328 aa9.91□□□□□ -0.82
SYNPO2-204ENST00000448416 PSPC1Q8WXF1 523 aaKnown RBP9.91□□□□□ -0.82
SYNPO2-204ENST00000448416 HEMGNQ9BXL5 484 aa9.91□□□□□ -0.82
SYNPO2-204ENST00000448416 SLAIN2Q9P270 581 aa9.91□□□□□ -0.82
SYNPO2-204ENST00000448416 SLC17A7Q9P2U7 560 aa9.91□□□□□ -0.82
SYNPO2-204ENST00000448416 KCPQ6ZWJ8 1503 aa9.91□□□□□ -0.82
SYNPO2-204ENST00000448416 RGL2O15211 777 aa9.91□□□□□ -0.82
SYNPO2-204ENST00000448416 RFC4P35249 363 aa9.91□□□□□ -0.82
SYNPO2-204ENST00000448416 GSTM4Q03013 218 aa9.91□□□□□ -0.82
SYNPO2-204ENST00000448416 MECOMQ03112 1051 aa9.91□□□□□ -0.82
SYNPO2-204ENST00000448416 MYLK3Q32MK0 819 aa9.91□□□□□ -0.82
SYNPO2-204ENST00000448416 POTEGQ6S5H5 508 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms