RNA–Protein interactions for RNA: ENST00000448238.2

NIPBL-202, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 1 (best) BASIC

Gene NIPBL, Length 8,729 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-202ENST00000448238 SMIM22K7EJ46 135 aa9.32□□□□□ -0.92
NIPBL-202ENST00000448238 MYBL1P10243 752 aa9.32□□□□□ -0.92
NIPBL-202ENST00000448238 UQCRBP14927 111 aa9.32□□□□□ -0.92
NIPBL-202ENST00000448238 CDO1Q16878 200 aa9.32□□□□□ -0.92
NIPBL-202ENST00000448238 SV2CQ496J9 727 aa9.32□□□□□ -0.92
NIPBL-202ENST00000448238 EFHC2Q5JST6 749 aa9.32□□□□□ -0.92
NIPBL-202ENST00000448238 RPTNQ6XPR3 784 aa9.32□□□□□ -0.92
NIPBL-202ENST00000448238 SMIM5Q71RC9 77 aa9.32□□□□□ -0.92
NIPBL-202ENST00000448238 IQCF2Q8IXL9 164 aa9.32□□□□□ -0.92
NIPBL-202ENST00000448238 CHPFQ8IZ52 775 aa9.32□□□□□ -0.92
NIPBL-202ENST00000448238 DENND6BQ8NEG7 585 aa9.32□□□□□ -0.92
NIPBL-202ENST00000448238 TRIM2Q9C040 744 aa9.32□□□□□ -0.92
NIPBL-202ENST00000448238 ZNF112Q9UJU3 913 aa9.32□□□□□ -0.92
NIPBL-202ENST00000448238 FGD6Q6ZV73 1430 aa9.32□□□□□ -0.92
NIPBL-202ENST00000448238 BCLAF3A2AJT9 711 aaKnown RBP9.32□□□□□ -0.92
NIPBL-202ENST00000448238 VWA5AO00534 786 aa9.32□□□□□ -0.92
NIPBL-202ENST00000448238 ALOX12P18054 663 aa9.32□□□□□ -0.92
NIPBL-202ENST00000448238 HIBADHP31937 336 aaKnown RBP9.32□□□□□ -0.92
NIPBL-202ENST00000448238 GUCY1A2P33402 732 aa9.32□□□□□ -0.92
NIPBL-202ENST00000448238 COPAP53621 1224 aa9.32□□□□□ -0.92
NIPBL-202ENST00000448238 CYP51A1Q16850 503 aa9.32□□□□□ -0.92
NIPBL-202ENST00000448238 TDRPQ86YL5 185 aa9.32□□□□□ -0.92
NIPBL-202ENST00000448238 ZBTB10Q96DT7 871 aa9.32□□□□□ -0.92
NIPBL-202ENST00000448238 ZWILCHQ9H900 591 aa9.32□□□□□ -0.92
NIPBL-202ENST00000448238 UBP1Q9NZI7 540 aa9.32□□□□□ -0.92
NIPBL-202ENST00000448238 CLEC4AQ9UMR7 237 aa9.32□□□□□ -0.92
NIPBL-202ENST00000448238 PRLP01236 227 aa9.31□□□□□ -0.92
NIPBL-202ENST00000448238 CHN2P52757 468 aa9.31□□□□□ -0.92
NIPBL-202ENST00000448238 CHPF2Q9P2E5 772 aa9.31□□□□□ -0.92
NIPBL-202ENST00000448238 ASAP1Q9ULH1 1129 aa9.31□□□□□ -0.92
NIPBL-202ENST00000448238 KCNIP3Q9Y2W7 256 aa9.31□□□□□ -0.92
NIPBL-202ENST00000448238 SMARCA2P51531 1590 aa9.31□□□□□ -0.92
NIPBL-202ENST00000448238 IFRD1O00458 451 aaPredicted RBP9.31□□□□□ -0.92
NIPBL-202ENST00000448238 PLOD2O00469 737 aa9.31□□□□□ -0.92
NIPBL-202ENST00000448238 GGCXP38435 758 aa9.31□□□□□ -0.92
NIPBL-202ENST00000448238 CASP12Q6UXS9 341 aa9.31□□□□□ -0.92
NIPBL-202ENST00000448238 MAPKAPK5Q8IW41 473 aa9.31□□□□□ -0.92
NIPBL-202ENST00000448238 GPD1LQ8N335 351 aa9.31□□□□□ -0.92
NIPBL-202ENST00000448238 P2RX5Q93086 422 aa9.31□□□□□ -0.92
NIPBL-202ENST00000448238 KLHL4Q9C0H6 718 aa9.31□□□□□ -0.92
NIPBL-202ENST00000448238 RERGLQ9H628 205 aa9.31□□□□□ -0.92
NIPBL-202ENST00000448238 ARMT1Q9H993 441 aa9.31□□□□□ -0.92
NIPBL-202ENST00000448238 ABCB6Q9NP58 842 aa9.31□□□□□ -0.92
NIPBL-202ENST00000448238 MAP3K20Q9NYL2 800 aaKnown RBP9.31□□□□□ -0.92
NIPBL-202ENST00000448238 AIM2O14862 343 aa9.31□□□□□ -0.92
NIPBL-202ENST00000448238 DSTYKQ6XUX3 929 aa9.31□□□□□ -0.92
NIPBL-202ENST00000448238 ZNF654Q8IZM8 581 aa9.31□□□□□ -0.92
NIPBL-202ENST00000448238 XAGE3Q8WTP9 111 aa9.31□□□□□ -0.92
NIPBL-202ENST00000448238 TMEM237Q96Q45 408 aa9.31□□□□□ -0.92
NIPBL-202ENST00000448238 AIF1LQ9BQI0 150 aa9.31□□□□□ -0.92
NIPBL-202ENST00000448238 AASDHPPTQ9NRN7 309 aa9.31□□□□□ -0.92
NIPBL-202ENST00000448238 ADAM22Q9P0K1 906 aa9.31□□□□□ -0.92
NIPBL-202ENST00000448238 KIAA1024Q9UPX6 916 aa9.31□□□□□ -0.92
NIPBL-202ENST00000448238 GJA3Q9Y6H8 435 aa9.31□□□□□ -0.92
NIPBL-202ENST00000448238 ZHX2Q9Y6X8 837 aa9.31□□□□□ -0.92
NIPBL-202ENST00000448238 ZNF23P17027 643 aa9.31□□□□□ -0.92
NIPBL-202ENST00000448238 FBXO11Q86XK2 927 aa9.31□□□□□ -0.92
NIPBL-202ENST00000448238 PROSER1Q86XN7 944 aa9.31□□□□□ -0.92
NIPBL-202ENST00000448238 SUCLG2Q96I99 432 aa9.31□□□□□ -0.92
NIPBL-202ENST00000448238 THUMPD3Q9BV44 507 aaKnown RBP9.31□□□□□ -0.92
NIPBL-202ENST00000448238 AP1M1Q9BXS5 423 aa9.31□□□□□ -0.92
NIPBL-202ENST00000448238 DCTPP1Q9H773 170 aa9.31□□□□□ -0.92
NIPBL-202ENST00000448238 CRNNQ9UBG3 495 aaPredicted RBP9.31□□□□□ -0.92
NIPBL-202ENST00000448238 TJP2Q9UDY2 1190 aa9.31□□□□□ -0.92
NIPBL-202ENST00000448238 GGA1Q9UJY5 639 aa9.31□□□□□ -0.92
NIPBL-202ENST00000448238 FAM50BQ9Y247 325 aa9.31□□□□□ -0.92
NIPBL-202ENST00000448238 AP1G2O75843 785 aa9.31□□□□□ -0.92
NIPBL-202ENST00000448238 CHI3L1P36222 383 aaPredicted RBP9.31□□□□□ -0.92
NIPBL-202ENST00000448238 R3HDM1Q15032 1099 aaKnown RBP9.31□□□□□ -0.92
NIPBL-202ENST00000448238 RGS21Q2M5E4 152 aa9.31□□□□□ -0.92
NIPBL-202ENST00000448238 GATAD2AQ86YP4 633 aa9.31□□□□□ -0.92
NIPBL-202ENST00000448238 TMEM168Q9H0V1 697 aa9.31□□□□□ -0.92
NIPBL-202ENST00000448238 NPHS2Q9NP85 383 aa9.31□□□□□ -0.92
NIPBL-202ENST00000448238 IP6K2Q9UHH9 426 aa9.31□□□□□ -0.92
NIPBL-202ENST00000448238 H7C1W4 665 aa9.31□□□□□ -0.92
NIPBL-202ENST00000448238 SFNP31947 248 aa9.31□□□□□ -0.92
NIPBL-202ENST00000448238 RALGDSQ12967 914 aa9.31□□□□□ -0.92
NIPBL-202ENST00000448238 PTGES3Q15185 160 aaKnown RBP9.31□□□□□ -0.92
NIPBL-202ENST00000448238 TTLL9Q3SXZ7 439 aa9.31□□□□□ -0.92
NIPBL-202ENST00000448238 PRMT9Q6P2P2 845 aa9.31□□□□□ -0.92
NIPBL-202ENST00000448238 TRAPPC9Q96Q05 1148 aa9.31□□□□□ -0.92
NIPBL-202ENST00000448238 VPS33BQ9H267 617 aa9.31□□□□□ -0.92
NIPBL-202ENST00000448238 DCLRE1BQ9H816 532 aa9.31□□□□□ -0.92
NIPBL-202ENST00000448238 WDR41Q9HAD4 459 aa9.31□□□□□ -0.92
NIPBL-202ENST00000448238 KLHL1Q9NR64 748 aa9.31□□□□□ -0.92
NIPBL-202ENST00000448238 PCDHA1Q9Y5I3 950 aa9.31□□□□□ -0.92
NIPBL-202ENST00000448238 GPC6Q9Y625 555 aaPredicted RBP9.31□□□□□ -0.92
NIPBL-202ENST00000448238 HAT1O14929 419 aa9.31□□□□□ -0.92
NIPBL-202ENST00000448238 RBMXL2O75526 392 aaKnown RBP9.31□□□□□ -0.92
NIPBL-202ENST00000448238 GJA8P48165 433 aa9.31□□□□□ -0.92
NIPBL-202ENST00000448238 SKP1P63208 163 aa9.31□□□□□ -0.92
NIPBL-202ENST00000448238 GPC5P78333 572 aa9.31□□□□□ -0.92
NIPBL-202ENST00000448238 SNX17Q15036 470 aa9.31□□□□□ -0.92
NIPBL-202ENST00000448238 AMER2Q8N7J2 671 aa9.31□□□□□ -0.92
NIPBL-202ENST00000448238 ITCHQ96J02 903 aa9.31□□□□□ -0.92
NIPBL-202ENST00000448238 COPRSQ9NQ92 184 aa9.31□□□□□ -0.92
NIPBL-202ENST00000448238 EIF3LQ9Y262 564 aaKnown RBP9.31□□□□□ -0.92
NIPBL-202ENST00000448238 OR14I1A6ND48 311 aa9.3□□□□□ -0.92
NIPBL-202ENST00000448238 IRS4O14654 1257 aaPredicted RBP9.3□□□□□ -0.92
NIPBL-202ENST00000448238 AGTP01019 485 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms