RNA–Protein interactions for RNA: ENST00000447641.5

SREBF1-207, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 3

Gene SREBF1, Length 644 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-207ENST00000447641 LRRC63Q05C16 580 aa15.24■□□□□ 0.03
SREBF1-207ENST00000447641 CBX2Q14781 532 aaPredicted RBP15.24■□□□□ 0.03
SREBF1-207ENST00000447641 C1orf220Q5T0J3 134 aa15.24■□□□□ 0.03
SREBF1-207ENST00000447641 TTI2Q6NXR4 508 aa15.24■□□□□ 0.03
SREBF1-207ENST00000447641 LILRA6Q6PI73 481 aa15.24■□□□□ 0.03
SREBF1-207ENST00000447641 SASS6Q6UVJ0 657 aa15.24■□□□□ 0.03
SREBF1-207ENST00000447641 PRSS55Q6UWB4 352 aaPredicted RBP15.24■□□□□ 0.03
SREBF1-207ENST00000447641 LRSAM1Q6UWE0 723 aa15.24■□□□□ 0.03
SREBF1-207ENST00000447641 RBM43Q6ZSC3 357 aaKnown RBP15.24■□□□□ 0.03
SREBF1-207ENST00000447641 PPFIBP1Q86W92 1011 aa15.24■□□□□ 0.03
SREBF1-207ENST00000447641 CEP57Q86XR8 500 aa15.24■□□□□ 0.03
SREBF1-207ENST00000447641 CSGALNACT2Q8N6G5 542 aa15.24■□□□□ 0.03
SREBF1-207ENST00000447641 LRRC52Q8N7C0 313 aa15.24■□□□□ 0.03
SREBF1-207ENST00000447641 MKNK1Q9BUB5 465 aa15.24■□□□□ 0.03
SREBF1-207ENST00000447641 FRMD4BQ9Y2L6 1034 aa15.24■□□□□ 0.03
SREBF1-207ENST00000447641 BACE2Q9Y5Z0 518 aa15.24■□□□□ 0.03
SREBF1-207ENST00000447641 HCFC2Q9Y5Z7 792 aa15.24■□□□□ 0.03
SREBF1-207ENST00000447641 LRRIQ3A6PVS8 624 aaPredicted RBP15.23■□□□□ 0.03
SREBF1-207ENST00000447641 IKBKBO14920 756 aa15.23■□□□□ 0.03
SREBF1-207ENST00000447641 OAZ2O95190 189 aa15.23■□□□□ 0.03
SREBF1-207ENST00000447641 PAPLNO95428 1278 aa15.23■□□□□ 0.03
SREBF1-207ENST00000447641 ITGB3P05106 788 aa15.23■□□□□ 0.03
SREBF1-207ENST00000447641 CYP11A1P05108 521 aa15.23■□□□□ 0.03
SREBF1-207ENST00000447641 ADH1AP07327 375 aa15.23■□□□□ 0.03
SREBF1-207ENST00000447641 DLATP10515 647 aaKnown RBP15.23■□□□□ 0.03
SREBF1-207ENST00000447641 TYMPP19971 482 aa15.23■□□□□ 0.03
SREBF1-207ENST00000447641 PSMC2P35998 433 aaKnown RBP15.23■□□□□ 0.03
SREBF1-207ENST00000447641 PNPLA4P41247 253 aa15.23■□□□□ 0.03
SREBF1-207ENST00000447641 NDUFV1P49821 464 aa15.23■□□□□ 0.03
SREBF1-207ENST00000447641 AP3M2P53677 418 aa15.23■□□□□ 0.03
SREBF1-207ENST00000447641 RBP5P82980 135 aa15.23■□□□□ 0.03
SREBF1-207ENST00000447641 FKBP3Q00688 224 aaKnown RBP15.23■□□□□ 0.03
SREBF1-207ENST00000447641 STIM1Q13586 685 aa15.23■□□□□ 0.03
SREBF1-207ENST00000447641 PSMD5Q16401 504 aa15.23■□□□□ 0.03
SREBF1-207ENST00000447641 VARS2Q5ST30 1063 aaKnown RBP15.23■□□□□ 0.03
SREBF1-207ENST00000447641 CEP135Q66GS9 1140 aa15.23■□□□□ 0.03
SREBF1-207ENST00000447641 LMBRD2Q68DH5 695 aaPredicted RBP15.23■□□□□ 0.03
SREBF1-207ENST00000447641 RSPO2Q6UXX9 243 aaPredicted RBP15.23■□□□□ 0.03
SREBF1-207ENST00000447641 TRIM67Q6ZTA4 783 aa15.23■□□□□ 0.03
SREBF1-207ENST00000447641 ANKS3Q6ZW76 656 aa15.23■□□□□ 0.03
SREBF1-207ENST00000447641 TRAPPC11Q7Z392 1133 aa15.23■□□□□ 0.03
SREBF1-207ENST00000447641 APPL2Q8NEU8 664 aa15.23■□□□□ 0.03
SREBF1-207ENST00000447641 ANP32BQ92688 251 aaKnown RBP15.23■□□□□ 0.03
SREBF1-207ENST00000447641 CCDC127Q96BQ5 260 aa15.23■□□□□ 0.03
SREBF1-207ENST00000447641 ANKRD36BP1Q96IX9 119 aa15.23■□□□□ 0.03
SREBF1-207ENST00000447641 SENP8Q96LD8 212 aa15.23■□□□□ 0.03
SREBF1-207ENST00000447641 FNBP1Q96RU3 617 aa15.23■□□□□ 0.03
SREBF1-207ENST00000447641 DUSP9Q99956 384 aaKnown RBP15.23■□□□□ 0.03
SREBF1-207ENST00000447641 TSPY26PQ9H489 355 aa15.23■□□□□ 0.03
SREBF1-207ENST00000447641 GDAP2Q9NXN4 497 aa15.23■□□□□ 0.03
SREBF1-207ENST00000447641 BARX2Q9UMQ3 279 aaPredicted RBP15.23■□□□□ 0.03
SREBF1-207ENST00000447641 AGAP1Q9UPQ3 857 aa15.23■□□□□ 0.03
SREBF1-207ENST00000447641 DMXL1Q9Y485 3027 aa15.22■□□□□ 0.03
SREBF1-207ENST00000447641 TRIM49BA6NDI0 452 aa15.22■□□□□ 0.03
SREBF1-207ENST00000447641 KPNA7A9QM74 516 aa15.22■□□□□ 0.03
SREBF1-207ENST00000447641 ADAM12O43184 909 aa15.22■□□□□ 0.03
SREBF1-207ENST00000447641 TNNC2P02585 160 aa15.22■□□□□ 0.03
SREBF1-207ENST00000447641 C4BPAP04003 597 aaKnown RBP15.22■□□□□ 0.03
SREBF1-207ENST00000447641 TMEM191BP0C7N4 346 aa15.22■□□□□ 0.03
SREBF1-207ENST00000447641 RPL17P18621 184 aaKnown RBP15.22■□□□□ 0.03
SREBF1-207ENST00000447641 TNNI1P19237 187 aa15.22■□□□□ 0.03
SREBF1-207ENST00000447641 KLRC2P26717 231 aa15.22■□□□□ 0.03
SREBF1-207ENST00000447641 POLR2BP30876 1174 aaKnown RBP15.22■□□□□ 0.03
SREBF1-207ENST00000447641 TAF6P49848 677 aa15.22■□□□□ 0.03
SREBF1-207ENST00000447641 VCPP55072 806 aaKnown RBP15.22■□□□□ 0.03
SREBF1-207ENST00000447641 DLG4P78352 724 aa15.22■□□□□ 0.03
SREBF1-207ENST00000447641 ZXDAP98168 799 aa15.22■□□□□ 0.03
SREBF1-207ENST00000447641 RAB33AQ14088 237 aa15.22■□□□□ 0.03
SREBF1-207ENST00000447641 SLC8B1Q6J4K2 584 aa15.22■□□□□ 0.03
SREBF1-207ENST00000447641 C15orf39Q6ZRI6 1047 aa15.22■□□□□ 0.03
SREBF1-207ENST00000447641 INTS8Q75QN2 995 aaKnown RBP15.22■□□□□ 0.03
SREBF1-207ENST00000447641 LIMS2Q7Z4I7 341 aa15.22■□□□□ 0.03
SREBF1-207ENST00000447641 ASIC4Q96FT7 647 aa15.22■□□□□ 0.03
SREBF1-207ENST00000447641 NAT10Q9H0A0 1025 aaKnown RBP15.22■□□□□ 0.03
SREBF1-207ENST00000447641 S1PR5Q9H228 398 aa15.22■□□□□ 0.03
SREBF1-207ENST00000447641 TSC2P49815 1807 aa15.22■□□□□ 0.03
SREBF1-207ENST00000447641 SYCE3A1L190 88 aa15.21■□□□□ 0.03
SREBF1-207ENST00000447641 H7C4K7 107 aa15.21■□□□□ 0.03
SREBF1-207ENST00000447641 CETN3O15182 167 aa15.21■□□□□ 0.03
SREBF1-207ENST00000447641 CST3P01034 146 aaPredicted RBP15.21■□□□□ 0.03
SREBF1-207ENST00000447641 EPCAMP16422 314 aa15.21■□□□□ 0.03
SREBF1-207ENST00000447641 CA8P35219 290 aa15.21■□□□□ 0.03
SREBF1-207ENST00000447641 VAMP7P51809 220 aa15.21■□□□□ 0.03
SREBF1-207ENST00000447641 PTPN5P54829 565 aa15.21■□□□□ 0.03
SREBF1-207ENST00000447641 SV2CQ496J9 727 aa15.21■□□□□ 0.03
SREBF1-207ENST00000447641 ANKRD54Q6NXT1 300 aa15.21■□□□□ 0.03
SREBF1-207ENST00000447641 SYCE2Q6PIF2 218 aa15.21■□□□□ 0.03
SREBF1-207ENST00000447641 FAM186BQ8IYM0 893 aa15.21■□□□□ 0.03
SREBF1-207ENST00000447641 MLKLQ8NB16 471 aa15.21■□□□□ 0.03
SREBF1-207ENST00000447641 HDAC7Q8WUI4 952 aa15.21■□□□□ 0.03
SREBF1-207ENST00000447641 NELFBQ8WX92 580 aa15.21■□□□□ 0.03
SREBF1-207ENST00000447641 CASP10Q92851 521 aa15.21■□□□□ 0.03
SREBF1-207ENST00000447641 EEF2KMTQ96G04 330 aa15.21■□□□□ 0.03
SREBF1-207ENST00000447641 ZNF560Q96MR9 790 aa15.21■□□□□ 0.03
SREBF1-207ENST00000447641 MED15Q96RN5 788 aa15.21■□□□□ 0.03
SREBF1-207ENST00000447641 TSG101Q99816 390 aa15.21■□□□□ 0.03
SREBF1-207ENST00000447641 OXCT2Q9BYC2 517 aaPredicted RBP15.21■□□□□ 0.03
SREBF1-207ENST00000447641 FAM86C1Q9NVL1 165 aa15.21■□□□□ 0.03
SREBF1-207ENST00000447641 USP15Q9Y4E8 981 aaPredicted RBP15.21■□□□□ 0.03
SREBF1-207ENST00000447641 SPTBN4Q9H254 2564 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms