RNA–Protein interactions for RNA: ENST00000447267.4

SDCBP-205, Transcript of syndecan binding protein, humanhuman

TSL 3 BASIC

Gene SDCBP, Length 772 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-205ENST00000447267 TMEM87AQ8NBN3 555 aa5.88□□□□□ -1.47
SDCBP-205ENST00000447267 RNF141Q8WVD5 230 aa5.88□□□□□ -1.47
SDCBP-205ENST00000447267 GLG1Q92896 1179 aa5.88□□□□□ -1.47
SDCBP-205ENST00000447267 CHMP4CQ96CF2 233 aa5.88□□□□□ -1.47
SDCBP-205ENST00000447267 KREMEN1Q96MU8 473 aa5.88□□□□□ -1.47
SDCBP-205ENST00000447267 SLC38A3Q99624 504 aa5.88□□□□□ -1.47
SDCBP-205ENST00000447267 KRTAP4-9Q9BYQ8 210 aa5.88□□□□□ -1.47
SDCBP-205ENST00000447267 RNF32Q9H0A6 362 aa5.88□□□□□ -1.47
SDCBP-205ENST00000447267 EHMT1Q9H9B1 1298 aa5.88□□□□□ -1.47
SDCBP-205ENST00000447267 SFXN1Q9H9B4 322 aa5.88□□□□□ -1.47
SDCBP-205ENST00000447267 WDR6Q9NNW5 1121 aaKnown RBP5.88□□□□□ -1.47
SDCBP-205ENST00000447267 HEBP1Q9NRV9 189 aa5.88□□□□□ -1.47
SDCBP-205ENST00000447267 KBTBD4Q9NVX7 518 aa5.88□□□□□ -1.47
SDCBP-205ENST00000447267 KLHL3Q9UH77 587 aa5.88□□□□□ -1.47
SDCBP-205ENST00000447267 PDS5AQ29RF7 1337 aaKnown RBP5.88□□□□□ -1.47
SDCBP-205ENST00000447267 NAV3Q8IVL0 2385 aa5.88□□□□□ -1.47
SDCBP-205ENST00000447267 PLXNA4Q9HCM2 1894 aa5.88□□□□□ -1.47
SDCBP-205ENST00000447267 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP5.87□□□□□ -1.47
SDCBP-205ENST00000447267 TRABD2BA6NFA1 517 aa5.87□□□□□ -1.47
SDCBP-205ENST00000447267 STAG3L1P0CL83 205 aa5.87□□□□□ -1.47
SDCBP-205ENST00000447267 ELAVL4P26378 380 aaKnown RBP5.87□□□□□ -1.47
SDCBP-205ENST00000447267 CD52P31358 61 aa5.87□□□□□ -1.47
SDCBP-205ENST00000447267 IRX4P78413 519 aa5.87□□□□□ -1.47
SDCBP-205ENST00000447267 ATP8B2P98198 1209 aa5.87□□□□□ -1.47
SDCBP-205ENST00000447267 BAATQ14032 418 aaPredicted RBP5.87□□□□□ -1.47
SDCBP-205ENST00000447267 RSPO2Q6UXX9 243 aaPredicted RBP5.87□□□□□ -1.47
SDCBP-205ENST00000447267 GET4Q7L5D6 327 aaPredicted RBP5.87□□□□□ -1.47
SDCBP-205ENST00000447267 PIP4P1Q86T03 277 aa5.87□□□□□ -1.47
SDCBP-205ENST00000447267 GOLM1Q8NBJ4 401 aa5.87□□□□□ -1.47
SDCBP-205ENST00000447267 ABHD4Q8TB40 342 aa5.87□□□□□ -1.47
SDCBP-205ENST00000447267 SCFD2Q8WU76 684 aa5.87□□□□□ -1.47
SDCBP-205ENST00000447267 KIF2CQ99661 725 aa5.87□□□□□ -1.47
SDCBP-205ENST00000447267 RNPEPQ9H4A4 650 aa5.87□□□□□ -1.47
SDCBP-205ENST00000447267 AGO3Q9H9G7 860 aaKnown RBP5.87□□□□□ -1.47
SDCBP-205ENST00000447267 VTI1BQ9UEU0 232 aa5.87□□□□□ -1.47
SDCBP-205ENST00000447267 DUSP13Q9UII6 198 aa5.87□□□□□ -1.47
SDCBP-205ENST00000447267 PCDHGA5Q9Y5G8 931 aa5.87□□□□□ -1.47
SDCBP-205ENST00000447267 COL5A1P20908 1838 aaPredicted RBP5.87□□□□□ -1.47
SDCBP-205ENST00000447267 PATJQ8NI35 1801 aa5.87□□□□□ -1.47
SDCBP-205ENST00000447267 CACNA1EQ15878 2313 aa5.86□□□□□ -1.47
SDCBP-205ENST00000447267 CLUHO75153 1309 aa5.86□□□□□ -1.47
SDCBP-205ENST00000447267 CCDC195A0A1B0GUA6 201 aa5.86□□□□□ -1.47
SDCBP-205ENST00000447267 TEX51A0A1B0GUA7 166 aa5.86□□□□□ -1.47
SDCBP-205ENST00000447267 NOTOA8MTQ0 251 aa5.86□□□□□ -1.47
SDCBP-205ENST00000447267 NT5C1B-RDH14C9J2C7 533 aa5.86□□□□□ -1.47
SDCBP-205ENST00000447267 MEFVO15553 781 aaPredicted RBP5.86□□□□□ -1.47
SDCBP-205ENST00000447267 RPP40O75818 363 aaKnown RBP5.86□□□□□ -1.47
SDCBP-205ENST00000447267 UBOX5O94941 541 aa5.86□□□□□ -1.47
SDCBP-205ENST00000447267 BPNT1O95861 308 aa5.86□□□□□ -1.47
SDCBP-205ENST00000447267 F2P00734 622 aa5.86□□□□□ -1.47
SDCBP-205ENST00000447267 GH1P01241 217 aa5.86□□□□□ -1.47
SDCBP-205ENST00000447267 CCDC192P0DO97 292 aa5.86□□□□□ -1.47
SDCBP-205ENST00000447267 SCG2P13521 617 aa5.86□□□□□ -1.47
SDCBP-205ENST00000447267 TEKQ02763 1124 aa5.86□□□□□ -1.47
SDCBP-205ENST00000447267 KRT17Q04695 432 aa5.86□□□□□ -1.47
SDCBP-205ENST00000447267 CCDC62Q6P9F0 684 aa5.86□□□□□ -1.47
SDCBP-205ENST00000447267 FBXL19Q6PCT2 694 aa5.86□□□□□ -1.47
SDCBP-205ENST00000447267 KCNT2Q6UVM3 1135 aa5.86□□□□□ -1.47
SDCBP-205ENST00000447267 SEPT14Q6ZU15 432 aa5.86□□□□□ -1.47
SDCBP-205ENST00000447267 REC114Q7Z4M0 266 aa5.86□□□□□ -1.47
SDCBP-205ENST00000447267 WDR5BQ86VZ2 330 aa5.86□□□□□ -1.47
SDCBP-205ENST00000447267 GAB3Q8WWW8 586 aa5.86□□□□□ -1.47
SDCBP-205ENST00000447267 KXD1Q9BQD3 176 aa5.86□□□□□ -1.47
SDCBP-205ENST00000447267 G6PC3Q9BUM1 346 aa5.86□□□□□ -1.47
SDCBP-205ENST00000447267 KATNAL1Q9BW62 490 aa5.86□□□□□ -1.47
SDCBP-205ENST00000447267 RBM12Q9NTZ6 932 aaKnown RBP5.86□□□□□ -1.47
SDCBP-205ENST00000447267 SETD4Q9NVD3 440 aa5.86□□□□□ -1.47
SDCBP-205ENST00000447267 MAN2B2Q9Y2E5 1009 aa5.86□□□□□ -1.47
SDCBP-205ENST00000447267 ZNF281Q9Y2X9 895 aa5.86□□□□□ -1.47
SDCBP-205ENST00000447267 ZFHX3Q15911 3703 aa5.85□□□□□ -1.47
SDCBP-205ENST00000447267 SALL3Q9BXA9 1300 aa5.85□□□□□ -1.47
SDCBP-205ENST00000447267 DCLK1O15075 740 aa5.85□□□□□ -1.47
SDCBP-205ENST00000447267 RFPL2O75678 378 aa5.85□□□□□ -1.47
SDCBP-205ENST00000447267 NDUFB10O96000 172 aa5.85□□□□□ -1.47
SDCBP-205ENST00000447267 SMIM10L2AP0DMW4 78 aa5.85□□□□□ -1.47
SDCBP-205ENST00000447267 SMIM10L2BP0DMW5 78 aa5.85□□□□□ -1.47
SDCBP-205ENST00000447267 FGFR1P11362 822 aa5.85□□□□□ -1.47
SDCBP-205ENST00000447267 PDIA4P13667 645 aaKnown RBP5.85□□□□□ -1.47
SDCBP-205ENST00000447267 IL12RB1P42701 662 aa5.85□□□□□ -1.47
SDCBP-205ENST00000447267 YARSP54577 528 aaKnown RBP5.85□□□□□ -1.47
SDCBP-205ENST00000447267 GNAI1P63096 354 aa5.85□□□□□ -1.47
SDCBP-205ENST00000447267 CXADRP78310 365 aa5.85□□□□□ -1.47
SDCBP-205ENST00000447267 KLRC3Q07444 240 aa5.85□□□□□ -1.47
SDCBP-205ENST00000447267 G3BP1Q13283 466 aaKnown RBP eCLIP5.85□□□□□ -1.47
SDCBP-205ENST00000447267 SNAP47Q5SQN1 464 aa5.85□□□□□ -1.47
SDCBP-205ENST00000447267 LRRC55Q6ZSA7 311 aa5.85□□□□□ -1.47
SDCBP-205ENST00000447267 STAMQ92783 540 aa5.85□□□□□ -1.47
SDCBP-205ENST00000447267 TSR2Q969E8 191 aaKnown RBP5.85□□□□□ -1.47
SDCBP-205ENST00000447267 CAMK1GQ96NX5 476 aa5.85□□□□□ -1.47
SDCBP-205ENST00000447267 CHMP4AQ9BY43 222 aa5.85□□□□□ -1.47
SDCBP-205ENST00000447267 TRIT1Q9H3H1 467 aaKnown RBP5.85□□□□□ -1.47
SDCBP-205ENST00000447267 TCP11L1Q9NUJ3 509 aa5.85□□□□□ -1.47
SDCBP-205ENST00000447267 GPATCH2Q9NW75 528 aa5.85□□□□□ -1.47
SDCBP-205ENST00000447267 IFT57Q9NWB7 429 aa5.85□□□□□ -1.47
SDCBP-205ENST00000447267 SPG21Q9NZD8 308 aa5.85□□□□□ -1.47
SDCBP-205ENST00000447267 DKK4Q9UBT3 224 aa5.85□□□□□ -1.47
SDCBP-205ENST00000447267 PA2G4Q9UQ80 394 aaKnown RBP5.85□□□□□ -1.47
SDCBP-205ENST00000447267 MRPS17Q9Y2R5 130 aaKnown RBP5.85□□□□□ -1.47
SDCBP-205ENST00000447267 PCDHB7Q9Y5E2 793 aa5.85□□□□□ -1.47
SDCBP-205ENST00000447267 SETD2Q9BYW2 2564 aaPredicted RBP5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms