RNA–Protein interactions for RNA: ENST00000447024.5

SMARCE1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 3

Gene SMARCE1, Length 536 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-206ENST00000447024 IFNGR1P15260 489 aa8.84□□□□□ -0.99
SMARCE1-206ENST00000447024 IFNAR1P17181 557 aa8.84□□□□□ -0.99
SMARCE1-206ENST00000447024 RXRAP19793 462 aa8.84□□□□□ -0.99
SMARCE1-206ENST00000447024 HOXA13P31271 388 aaPredicted RBP8.84□□□□□ -0.99
SMARCE1-206ENST00000447024 FXR1P51114 621 aaKnown RBP eCLIP8.84□□□□□ -0.99
SMARCE1-206ENST00000447024 BEX3Q00994 111 aa8.84□□□□□ -0.99
SMARCE1-206ENST00000447024 ARHGAP1Q07960 439 aa8.84□□□□□ -0.99
SMARCE1-206ENST00000447024 NEDD9Q14511 834 aa8.84□□□□□ -0.99
SMARCE1-206ENST00000447024 ANKRD1Q15327 319 aa8.84□□□□□ -0.99
SMARCE1-206ENST00000447024 CPLX2Q6PUV4 134 aaKnown RBP8.84□□□□□ -0.99
SMARCE1-206ENST00000447024 SEPT14Q6ZU15 432 aa8.84□□□□□ -0.99
SMARCE1-206ENST00000447024 Q6ZUG5 572 aa8.84□□□□□ -0.99
SMARCE1-206ENST00000447024 SESTD1Q86VW0 696 aa8.84□□□□□ -0.99
SMARCE1-206ENST00000447024 FAM126BQ8IXS8 530 aa8.84□□□□□ -0.99
SMARCE1-206ENST00000447024 DHX37Q8IY37 1157 aaKnown RBP8.84□□□□□ -0.99
SMARCE1-206ENST00000447024 FIBCD1Q8N539 461 aa8.84□□□□□ -0.99
SMARCE1-206ENST00000447024 TAB3Q8N5C8 712 aaPredicted RBP8.84□□□□□ -0.99
SMARCE1-206ENST00000447024 ALG3Q92685 438 aa8.84□□□□□ -0.99
SMARCE1-206ENST00000447024 GPRASP2Q96D09 838 aa8.84□□□□□ -0.99
SMARCE1-206ENST00000447024 RNF26Q9BY78 433 aaPredicted RBP8.84□□□□□ -0.99
SMARCE1-206ENST00000447024 RIC8AQ9NPQ8 531 aa8.84□□□□□ -0.99
SMARCE1-206ENST00000447024 DUSP10Q9Y6W6 482 aa8.84□□□□□ -0.99
SMARCE1-206ENST00000447024 TRIM43BA6NCK2 446 aa8.83□□□□□ -1
SMARCE1-206ENST00000447024 PRPF3O43395 683 aaKnown RBP8.83□□□□□ -1
SMARCE1-206ENST00000447024 PARNO95453 639 aaKnown RBP8.83□□□□□ -1
SMARCE1-206ENST00000447024 MYCLP12524 364 aaPredicted RBP8.83□□□□□ -1
SMARCE1-206ENST00000447024 SCG2P13521 617 aa8.83□□□□□ -1
SMARCE1-206ENST00000447024 CD247P20963 164 aa8.83□□□□□ -1
SMARCE1-206ENST00000447024 GNA11P29992 359 aa8.83□□□□□ -1
SMARCE1-206ENST00000447024 AKAP17AQ02040 695 aaKnown RBP8.83□□□□□ -1
SMARCE1-206ENST00000447024 PPIGQ13427 754 aaKnown RBP eCLIP8.83□□□□□ -1
SMARCE1-206ENST00000447024 MRPL58Q14197 206 aaKnown RBP8.83□□□□□ -1
SMARCE1-206ENST00000447024 PFKFB3Q16875 520 aaPredicted RBP8.83□□□□□ -1
SMARCE1-206ENST00000447024 CELF3Q5SZQ8 465 aaKnown RBP8.83□□□□□ -1
SMARCE1-206ENST00000447024 MFSD5Q6N075 450 aa8.83□□□□□ -1
SMARCE1-206ENST00000447024 HEATR3Q7Z4Q2 680 aa8.83□□□□□ -1
SMARCE1-206ENST00000447024 TMEM199Q8N511 208 aa8.83□□□□□ -1
SMARCE1-206ENST00000447024 BICD2Q8TD16 824 aa8.83□□□□□ -1
SMARCE1-206ENST00000447024 TRIM43Q96BQ3 446 aaPredicted RBP8.83□□□□□ -1
SMARCE1-206ENST00000447024 TCEANC2Q96MN5 208 aa8.83□□□□□ -1
SMARCE1-206ENST00000447024 SH3GLB2Q9NR46 395 aa8.83□□□□□ -1
SMARCE1-206ENST00000447024 DDX49Q9Y6V7 483 aaKnown RBP8.83□□□□□ -1
SMARCE1-206ENST00000447024 LTBP2Q14767 1821 aa8.82□□□□□ -1
SMARCE1-206ENST00000447024 MYH7BA7E2Y1 1941 aa8.82□□□□□ -1
SMARCE1-206ENST00000447024 ARIH2O95376 493 aa8.82□□□□□ -1
SMARCE1-206ENST00000447024 F2P00734 622 aa8.82□□□□□ -1
SMARCE1-206ENST00000447024 CD3EP07766 207 aa8.82□□□□□ -1
SMARCE1-206ENST00000447024 PFKMP08237 780 aa8.82□□□□□ -1
SMARCE1-206ENST00000447024 MMP3P08254 477 aa8.82□□□□□ -1
SMARCE1-206ENST00000447024 MYL3P08590 195 aa8.82□□□□□ -1
SMARCE1-206ENST00000447024 GLI4P10075 376 aa8.82□□□□□ -1
SMARCE1-206ENST00000447024 PDIA3P30101 505 aaKnown RBP8.82□□□□□ -1
SMARCE1-206ENST00000447024 L1CAMP32004 1257 aa8.82□□□□□ -1
SMARCE1-206ENST00000447024 ADCY7P51828 1080 aa8.82□□□□□ -1
SMARCE1-206ENST00000447024 NAPAP54920 295 aa8.82□□□□□ -1
SMARCE1-206ENST00000447024 MRPS9P82933 396 aaKnown RBP8.82□□□□□ -1
SMARCE1-206ENST00000447024 FPGSQ05932 587 aa8.82□□□□□ -1
SMARCE1-206ENST00000447024 LY6KQ17RY6 165 aa8.82□□□□□ -1
SMARCE1-206ENST00000447024 WWC2Q6AWC2 1192 aa8.82□□□□□ -1
SMARCE1-206ENST00000447024 USP17L6PQ6QN14 398 aa8.82□□□□□ -1
SMARCE1-206ENST00000447024 METTL7BQ6UX53 244 aa8.82□□□□□ -1
SMARCE1-206ENST00000447024 NIPA1Q7RTP0 329 aa8.82□□□□□ -1
SMARCE1-206ENST00000447024 B3GNT8Q7Z7M8 397 aa8.82□□□□□ -1
SMARCE1-206ENST00000447024 CARFQ8N187 725 aa8.82□□□□□ -1
SMARCE1-206ENST00000447024 CCDC148Q8NFR7 591 aa8.82□□□□□ -1
SMARCE1-206ENST00000447024 AFG1LQ8WV93 481 aa8.82□□□□□ -1
SMARCE1-206ENST00000447024 PIBF1Q8WXW3 757 aa8.82□□□□□ -1
SMARCE1-206ENST00000447024 SPON2Q9BUD6 331 aa8.82□□□□□ -1
SMARCE1-206ENST00000447024 C22orf23Q9BZE7 217 aa8.82□□□□□ -1
SMARCE1-206ENST00000447024 ZMYND12Q9H0C1 365 aa8.82□□□□□ -1
SMARCE1-206ENST00000447024 MLXIPQ9HAP2 919 aa8.82□□□□□ -1
SMARCE1-206ENST00000447024 FAM86C1Q9NVL1 165 aa8.82□□□□□ -1
SMARCE1-206ENST00000447024 NAP1L2Q9ULW6 460 aaPredicted RBP8.82□□□□□ -1
SMARCE1-206ENST00000447024 GRIN2DO15399 1336 aa8.81□□□□□ -1
SMARCE1-206ENST00000447024 LAMA3Q16787 3333 aa8.81□□□□□ -1
SMARCE1-206ENST00000447024 STXBP3O00186 592 aa8.81□□□□□ -1
SMARCE1-206ENST00000447024 CPLX1O14810 134 aa8.81□□□□□ -1
SMARCE1-206ENST00000447024 NOBOXO60393 691 aa8.81□□□□□ -1
SMARCE1-206ENST00000447024 CDKL5O76039 1030 aa8.81□□□□□ -1
SMARCE1-206ENST00000447024 GGPS1O95749 300 aa8.81□□□□□ -1
SMARCE1-206ENST00000447024 TP53P04637 393 aaPredicted RBP8.81□□□□□ -1
SMARCE1-206ENST00000447024 UBA1P22314 1058 aaKnown RBP8.81□□□□□ -1
SMARCE1-206ENST00000447024 CNR2P34972 360 aa8.81□□□□□ -1
SMARCE1-206ENST00000447024 RFC2P35250 354 aa8.81□□□□□ -1
SMARCE1-206ENST00000447024 RBL2Q08999 1139 aa8.81□□□□□ -1
SMARCE1-206ENST00000447024 BFSP2Q13515 415 aa8.81□□□□□ -1
SMARCE1-206ENST00000447024 NTRK3Q16288 839 aa8.81□□□□□ -1
SMARCE1-206ENST00000447024 FAM109BQ6ICB4 259 aaPredicted RBP8.81□□□□□ -1
SMARCE1-206ENST00000447024 GALNT17Q6IS24 598 aa8.81□□□□□ -1
SMARCE1-206ENST00000447024 RPUSD2Q8IZ73 545 aaKnown RBP8.81□□□□□ -1
SMARCE1-206ENST00000447024 IL31RAQ8NI17 732 aa8.81□□□□□ -1
SMARCE1-206ENST00000447024 CAGE1Q8TC20 777 aa8.81□□□□□ -1
SMARCE1-206ENST00000447024 DDX1Q92499 740 aaKnown RBP8.81□□□□□ -1
SMARCE1-206ENST00000447024 COPS5Q92905 334 aa8.81□□□□□ -1
SMARCE1-206ENST00000447024 BADQ92934 168 aa8.81□□□□□ -1
SMARCE1-206ENST00000447024 TNPO1Q92973 898 aaKnown RBP8.81□□□□□ -1
SMARCE1-206ENST00000447024 SPATA33Q96N06 139 aa8.81□□□□□ -1
SMARCE1-206ENST00000447024 MTIF3Q9H2K0 278 aaKnown RBP8.81□□□□□ -1
SMARCE1-206ENST00000447024 HIPK3Q9H422 1215 aa8.81□□□□□ -1
SMARCE1-206ENST00000447024 NOL6Q9H6R4 1146 aaKnown RBP8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms