RNA–Protein interactions for RNA: ENST00000446996.5

APOE-204, Transcript of apolipoprotein E, humanhuman

TSL 2

Gene APOE, Length 737 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOE-204ENST00000446996 VN1R2Q8NFZ6 395 aa23.65■■□□□ 1.38
APOE-204ENST00000446996 ATXN2LQ8WWM7 1075 aaKnown RBP23.65■■□□□ 1.38
APOE-204ENST00000446996 HPDLQ96IR7 371 aa23.65■■□□□ 1.38
APOE-204ENST00000446996 PLEKHA4Q9H4M7 779 aa23.65■■□□□ 1.38
APOE-204ENST00000446996 LINC01565O15544 149 aa23.64■■□□□ 1.37
APOE-204ENST00000446996 PHACTR2O75167 634 aa23.64■■□□□ 1.37
APOE-204ENST00000446996 GLUD1P00367 558 aa23.64■■□□□ 1.37
APOE-204ENST00000446996 MARSP56192 900 aaKnown RBP23.64■■□□□ 1.37
APOE-204ENST00000446996 STX17P56962 302 aa23.64■■□□□ 1.37
APOE-204ENST00000446996 PUS10Q3MIT2 529 aaKnown RBP23.64■■□□□ 1.37
APOE-204ENST00000446996 LEXMQ3ZCV2 418 aa23.64■■□□□ 1.37
APOE-204ENST00000446996 TDRD10Q5VZ19 366 aaKnown RBP23.64■■□□□ 1.37
APOE-204ENST00000446996 OVOS1Q6IE37 1185 aa23.64■■□□□ 1.37
APOE-204ENST00000446996 SV2AQ7L0J3 742 aa23.64■■□□□ 1.37
APOE-204ENST00000446996 RTL10Q7L3V2 364 aa23.64■■□□□ 1.37
APOE-204ENST00000446996 LIMS2Q7Z4I7 341 aa23.64■■□□□ 1.37
APOE-204ENST00000446996 TOP6BLQ8N6T0 577 aa23.64■■□□□ 1.37
APOE-204ENST00000446996 MSLNLQ96KJ4 702 aa23.64■■□□□ 1.37
APOE-204ENST00000446996 FAM84AQ96KN4 292 aa23.64■■□□□ 1.37
APOE-204ENST00000446996 TMEM8AQ9HCN3 771 aa23.64■■□□□ 1.37
APOE-204ENST00000446996 CLEC1BQ9P126 229 aa23.64■■□□□ 1.37
APOE-204ENST00000446996 ARMCX3Q9UH62 379 aaPredicted RBP23.64■■□□□ 1.37
APOE-204ENST00000446996 MAFFQ9ULX9 164 aa23.64■■□□□ 1.37
APOE-204ENST00000446996 OR6C75A6NL08 312 aa23.63■■□□□ 1.37
APOE-204ENST00000446996 HUS1O60921 280 aa23.63■■□□□ 1.37
APOE-204ENST00000446996 TBX10O75333 385 aa23.63■■□□□ 1.37
APOE-204ENST00000446996 PLXNA3P51805 1871 aa23.63■■□□□ 1.37
APOE-204ENST00000446996 BIRC3Q13489 604 aa23.63■■□□□ 1.37
APOE-204ENST00000446996 DPCR1Q3MIW9 517 aa23.63■■□□□ 1.37
APOE-204ENST00000446996 CTXN3Q4LDR2 81 aa23.63■■□□□ 1.37
APOE-204ENST00000446996 ANKRD54Q6NXT1 300 aa23.63■■□□□ 1.37
APOE-204ENST00000446996 SASS6Q6UVJ0 657 aa23.63■■□□□ 1.37
APOE-204ENST00000446996 TAF4BQ92750 862 aa23.63■■□□□ 1.37
APOE-204ENST00000446996 SRRTQ9BXP5 876 aaKnown RBP23.63■■□□□ 1.37
APOE-204ENST00000446996 TMEM63CQ9P1W3 806 aa23.63■■□□□ 1.37
APOE-204ENST00000446996 FBXL5Q9UKA1 691 aa23.63■■□□□ 1.37
APOE-204ENST00000446996 CDY1Q9Y6F8 540 aa23.63■■□□□ 1.37
APOE-204ENST00000446996 TSC2P49815 1807 aa23.63■■□□□ 1.37
APOE-204ENST00000446996 PAPLNO95428 1278 aa23.62■■□□□ 1.37
APOE-204ENST00000446996 EPCAMP16422 314 aa23.62■■□□□ 1.37
APOE-204ENST00000446996 RPL17P18621 184 aaKnown RBP23.62■■□□□ 1.37
APOE-204ENST00000446996 OR1D2P34982 312 aa23.62■■□□□ 1.37
APOE-204ENST00000446996 NCOA4Q13772 614 aa23.62■■□□□ 1.37
APOE-204ENST00000446996 SGSM1Q2NKQ1 1148 aa23.62■■□□□ 1.37
APOE-204ENST00000446996 TPGS2Q68CL5 300 aa23.62■■□□□ 1.37
APOE-204ENST00000446996 KRT39Q6A163 491 aa23.62■■□□□ 1.37
APOE-204ENST00000446996 SCARA3Q6AZY7 606 aa23.62■■□□□ 1.37
APOE-204ENST00000446996 PHF6Q8IWS0 365 aaKnown RBP eCLIP23.62■■□□□ 1.37
APOE-204ENST00000446996 THEM5Q8N1Q8 247 aa23.62■■□□□ 1.37
APOE-204ENST00000446996 ZNF461Q8TAF7 563 aa23.62■■□□□ 1.37
APOE-204ENST00000446996 EEF2KMTQ96G04 330 aa23.62■■□□□ 1.37
APOE-204ENST00000446996 XYLT2Q9H1B5 865 aa23.62■■□□□ 1.37
APOE-204ENST00000446996 PRDM6Q9NQX0 595 aa23.62■■□□□ 1.37
APOE-204ENST00000446996 TIMM13Q9Y5L4 95 aaPredicted RBP23.62■■□□□ 1.37
APOE-204ENST00000446996 SNX9Q9Y5X1 595 aa23.62■■□□□ 1.37
APOE-204ENST00000446996 REV3LO60673 3130 aa23.61■■□□□ 1.37
APOE-204ENST00000446996 DLL1O00548 723 aa23.61■■□□□ 1.37
APOE-204ENST00000446996 TGM5O43548 720 aa23.61■■□□□ 1.37
APOE-204ENST00000446996 ABLIM3O94929 683 aa23.61■■□□□ 1.37
APOE-204ENST00000446996 KCNA5P22460 613 aa23.61■■□□□ 1.37
APOE-204ENST00000446996 MRPS5P82675 430 aaKnown RBP23.61■■□□□ 1.37
APOE-204ENST00000446996 DLX2Q07687 328 aaPredicted RBP23.61■■□□□ 1.37
APOE-204ENST00000446996 PPP3CAQ08209 521 aa23.61■■□□□ 1.37
APOE-204ENST00000446996 SKOR2Q2VWA4 1001 aaPredicted RBP23.61■■□□□ 1.37
APOE-204ENST00000446996 CCDC40Q4G0X9 1142 aa23.61■■□□□ 1.37
APOE-204ENST00000446996 RSPO2Q6UXX9 243 aaPredicted RBP23.61■■□□□ 1.37
APOE-204ENST00000446996 EP400NLQ6ZTU2 488 aa23.61■■□□□ 1.37
APOE-204ENST00000446996 MED15Q96RN5 788 aa23.61■■□□□ 1.37
APOE-204ENST00000446996 RHOBTB2Q9BYZ6 727 aa23.61■■□□□ 1.37
APOE-204ENST00000446996 ANO10Q9NW15 660 aa23.61■■□□□ 1.37
APOE-204ENST00000446996 CD207Q9UJ71 328 aa23.61■■□□□ 1.37
APOE-204ENST00000446996 FBXW11Q9UKB1 542 aa23.61■■□□□ 1.37
APOE-204ENST00000446996 PMM2O15305 246 aa23.6■■□□□ 1.37
APOE-204ENST00000446996 ADAM12O43184 909 aa23.6■■□□□ 1.37
APOE-204ENST00000446996 LETM1O95202 739 aaPredicted RBP23.6■■□□□ 1.37
APOE-204ENST00000446996 VNN1O95497 513 aa23.6■■□□□ 1.37
APOE-204ENST00000446996 TRIM49P0CI25 452 aa23.6■■□□□ 1.37
APOE-204ENST00000446996 TRIM49CP0CI26 452 aa23.6■■□□□ 1.37
APOE-204ENST00000446996 CCDC192P0DO97 292 aa23.6■■□□□ 1.37
APOE-204ENST00000446996 GCLMP48507 274 aa23.6■■□□□ 1.37
APOE-204ENST00000446996 LHX1P48742 406 aa23.6■■□□□ 1.37
APOE-204ENST00000446996 MYL6P60660 151 aa23.6■■□□□ 1.37
APOE-204ENST00000446996 ROR1Q01973 937 aa23.6■■□□□ 1.37
APOE-204ENST00000446996 UVSSAQ2YD98 709 aa23.6■■□□□ 1.37
APOE-204ENST00000446996 WSCD1Q658N2 575 aa23.6■■□□□ 1.37
APOE-204ENST00000446996 LLGL2Q6P1M3 1020 aa23.6■■□□□ 1.37
APOE-204ENST00000446996 CYP26C1Q6V0L0 522 aa23.6■■□□□ 1.37
APOE-204ENST00000446996 PALB2Q86YC2 1186 aa23.6■■□□□ 1.37
APOE-204ENST00000446996 CMASQ8NFW8 434 aaPredicted RBP23.6■■□□□ 1.37
APOE-204ENST00000446996 SLC35C1Q96A29 364 aa23.6■■□□□ 1.37
APOE-204ENST00000446996 FAXDC2Q96IV6 333 aa23.6■■□□□ 1.37
APOE-204ENST00000446996 BARX2Q9UMQ3 279 aaPredicted RBP23.6■■□□□ 1.37
APOE-204ENST00000446996 L1RE1Q9UN81 338 aa23.6■■□□□ 1.37
APOE-204ENST00000446996 GABRDO14764 452 aa23.59■■□□□ 1.37
APOE-204ENST00000446996 TACC1O75410 805 aa23.59■■□□□ 1.37
APOE-204ENST00000446996 RBM10P98175 930 aaKnown RBP23.59■■□□□ 1.37
APOE-204ENST00000446996 ITIH3Q06033 890 aa23.59■■□□□ 1.37
APOE-204ENST00000446996 SMARCB1Q12824 385 aa23.59■■□□□ 1.37
APOE-204ENST00000446996 SYCE2Q6PIF2 218 aa23.59■■□□□ 1.37
APOE-204ENST00000446996 PDCL2Q8N4E4 241 aa23.59■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms