RNA–Protein interactions for RNA: ENST00000446852.5

SMC6-206, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 1 (best)

Gene SMC6, Length 2,460 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-206ENST00000446852 FAM193AP78312 1265 aa18.57■□□□□ 0.56
SMC6-206ENST00000446852 ZNF667Q5HYK9 610 aa18.57■□□□□ 0.56
SMC6-206ENST00000446852 C17orf99Q6UX52 265 aa18.57■□□□□ 0.56
SMC6-206ENST00000446852 EIF1ADQ8N9N8 165 aaKnown RBP18.57■□□□□ 0.56
SMC6-206ENST00000446852 CDHR5Q9HBB8 845 aa18.57■□□□□ 0.56
SMC6-206ENST00000446852 GINS2Q9Y248 185 aa18.57■□□□□ 0.56
SMC6-206ENST00000446852 DAPK3O43293 454 aa18.56■□□□□ 0.56
SMC6-206ENST00000446852 PROSCO94903 275 aa18.56■□□□□ 0.56
SMC6-206ENST00000446852 LSM8O95777 96 aaKnown RBP18.56■□□□□ 0.56
SMC6-206ENST00000446852 HLTFQ14527 1009 aaKnown RBP eCLIP18.56■□□□□ 0.564e-6■□□□□ 10
SMC6-206ENST00000446852 CHADLQ6NUI6 762 aa18.56■□□□□ 0.56
SMC6-206ENST00000446852 SAPCD2Q86UD0 394 aa18.56■□□□□ 0.56
SMC6-206ENST00000446852 SLC13A5Q86YT5 568 aaPredicted RBP18.56■□□□□ 0.56
SMC6-206ENST00000446852 WDTC1Q8N5D0 677 aa18.56■□□□□ 0.56
SMC6-206ENST00000446852 WHAMMQ8TF30 809 aa18.56■□□□□ 0.56
SMC6-206ENST00000446852 C18orf8Q96DM3 657 aa18.56■□□□□ 0.56
SMC6-206ENST00000446852 SMYD3Q9H7B4 428 aa18.56■□□□□ 0.56
SMC6-206ENST00000446852 SCN1AP35498 2009 aa18.56■□□□□ 0.56
SMC6-206ENST00000446852 PHF2O75151 1096 aa18.56■□□□□ 0.56
SMC6-206ENST00000446852 GPR32O75388 356 aa18.56■□□□□ 0.56
SMC6-206ENST00000446852 HSPA6P17066 643 aa18.56■□□□□ 0.56
SMC6-206ENST00000446852 CYP2B6P20813 491 aa18.56■□□□□ 0.56
SMC6-206ENST00000446852 DR1Q01658 176 aa18.56■□□□□ 0.56
SMC6-206ENST00000446852 IRF5Q13568 498 aa18.56■□□□□ 0.56
SMC6-206ENST00000446852 SIX1Q15475 284 aaPredicted RBP18.56■□□□□ 0.56
SMC6-206ENST00000446852 PPP2R5EQ16537 467 aa18.56■□□□□ 0.56
SMC6-206ENST00000446852 RUFY4Q6ZNE9 571 aa18.56■□□□□ 0.56
SMC6-206ENST00000446852 MRPL47Q9HD33 250 aaKnown RBP18.56■□□□□ 0.56
SMC6-206ENST00000446852 NRCAMQ92823 1304 aa18.55■□□□□ 0.56
SMC6-206ENST00000446852 PDCD11Q14690 1871 aaKnown RBP18.55■□□□□ 0.56
SMC6-206ENST00000446852 O00370 1275 aa18.55■□□□□ 0.56
SMC6-206ENST00000446852 HOXA11P31270 313 aaPredicted RBP18.55■□□□□ 0.56
SMC6-206ENST00000446852 SLC1A1P43005 524 aa18.55■□□□□ 0.56
SMC6-206ENST00000446852 TMEM132DQ14C87 1099 aa18.55■□□□□ 0.56
SMC6-206ENST00000446852 KYAT1Q16773 422 aa18.55■□□□□ 0.56
SMC6-206ENST00000446852 PPP1R2P3Q6NXS1 205 aa18.55■□□□□ 0.56
SMC6-206ENST00000446852 TTC27Q6P3X3 843 aa18.55■□□□□ 0.56
SMC6-206ENST00000446852 IFNL1Q8IU54 200 aa18.55■□□□□ 0.56
SMC6-206ENST00000446852 MREGQ8N565 214 aa18.55■□□□□ 0.56
SMC6-206ENST00000446852 CXCL16Q9H2A7 254 aa18.55■□□□□ 0.56
SMC6-206ENST00000446852 HMGXB4Q9UGU5 601 aa18.55■□□□□ 0.56
SMC6-206ENST00000446852 PCDHGC3Q9UN70 934 aa18.55■□□□□ 0.56
SMC6-206ENST00000446852 SCINQ9Y6U3 715 aa18.55■□□□□ 0.56
SMC6-206ENST00000446852 MBLAC1A4D2B0 266 aaPredicted RBP18.55■□□□□ 0.56
SMC6-206ENST00000446852 RNF40O75150 1001 aa18.55■□□□□ 0.56
SMC6-206ENST00000446852 POLR2BP30876 1174 aaKnown RBP18.55■□□□□ 0.56
SMC6-206ENST00000446852 ORC1Q13415 861 aa18.55■□□□□ 0.56
SMC6-206ENST00000446852 LLGL1Q15334 1064 aa18.55■□□□□ 0.56
SMC6-206ENST00000446852 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP18.55■□□□□ 0.561e-8■■■■■ 50.8
SMC6-206ENST00000446852 ACAP3Q96P50 834 aa18.55■□□□□ 0.56
SMC6-206ENST00000446852 ADPGKQ9BRR6 497 aa18.55■□□□□ 0.56
SMC6-206ENST00000446852 DPH5Q9H2P9 285 aa18.55■□□□□ 0.56
SMC6-206ENST00000446852 PARVAQ9NVD7 372 aa18.55■□□□□ 0.56
SMC6-206ENST00000446852 TLR3O15455 904 aaKnown RBP18.54■□□□□ 0.56
SMC6-206ENST00000446852 CDH5P33151 784 aaPredicted RBP18.54■□□□□ 0.56
SMC6-206ENST00000446852 RAD23BP54727 409 aa18.54■□□□□ 0.56
SMC6-206ENST00000446852 YWHAEP62258 255 aaKnown RBP18.54■□□□□ 0.56
SMC6-206ENST00000446852 RPL7AP62424 266 aaKnown RBP18.54■□□□□ 0.56
SMC6-206ENST00000446852 MFSD10Q14728 455 aa18.54■□□□□ 0.56
SMC6-206ENST00000446852 RGMBQ6NW40 437 aa18.54■□□□□ 0.56
SMC6-206ENST00000446852 TMEM35BQ8NCS4 154 aa18.54■□□□□ 0.56
SMC6-206ENST00000446852 DDX27Q96GQ7 796 aaKnown RBP18.54■□□□□ 0.56
SMC6-206ENST00000446852 TWNKQ96RR1 684 aa18.54■□□□□ 0.56
SMC6-206ENST00000446852 OSMRQ99650 979 aa18.54■□□□□ 0.56
SMC6-206ENST00000446852 VRTNQ9H8Y1 702 aa18.54■□□□□ 0.56
SMC6-206ENST00000446852 SLTMQ9NWH9 1034 aaKnown RBP eCLIP18.54■□□□□ 0.56
SMC6-206ENST00000446852 UTP11Q9Y3A2 253 aaKnown RBP18.54■□□□□ 0.56
SMC6-206ENST00000446852 TCRBV5S1A1TA0A578 114 aa18.54■□□□□ 0.56
SMC6-206ENST00000446852 RARAP10276 462 aa18.54■□□□□ 0.56
SMC6-206ENST00000446852 CHRNA3P32297 505 aa18.54■□□□□ 0.56
SMC6-206ENST00000446852 GRM5P41594 1212 aa18.54■□□□□ 0.56
SMC6-206ENST00000446852 PTGIRP43119 386 aa18.54■□□□□ 0.56
SMC6-206ENST00000446852 LACTBP83111 547 aaPredicted RBP18.54■□□□□ 0.56
SMC6-206ENST00000446852 DHX34Q14147 1143 aaKnown RBP18.54■□□□□ 0.56
SMC6-206ENST00000446852 DENND1BQ6P3S1 775 aa18.54■□□□□ 0.56
SMC6-206ENST00000446852 TRIM31Q9BZY9 425 aa18.54■□□□□ 0.56
SMC6-206ENST00000446852 ADAM21Q9UKJ8 722 aa18.54■□□□□ 0.56
SMC6-206ENST00000446852 GJD2Q9UKL4 321 aa18.54■□□□□ 0.56
SMC6-206ENST00000446852 C2CD2Q9Y426 696 aa18.54■□□□□ 0.56
SMC6-206ENST00000446852 SMIM35A0A1B0GVV1 85 aa18.53■□□□□ 0.56
SMC6-206ENST00000446852 NPTXRO95502 500 aa18.53■□□□□ 0.56
SMC6-206ENST00000446852 CYP2C9P11712 490 aa18.53■□□□□ 0.56
SMC6-206ENST00000446852 CD19P15391 556 aa18.53■□□□□ 0.56
SMC6-206ENST00000446852 EIF4BP23588 611 aaKnown RBP18.53■□□□□ 0.56
SMC6-206ENST00000446852 TAS2R40P59535 323 aa18.53■□□□□ 0.56
SMC6-206ENST00000446852 ADAM17P78536 824 aa18.53■□□□□ 0.56
SMC6-206ENST00000446852 BEX3Q00994 111 aa18.53■□□□□ 0.56
SMC6-206ENST00000446852 CYP1B1Q16678 543 aa18.53■□□□□ 0.56
SMC6-206ENST00000446852 JAMLQ86YT9 394 aa18.53■□□□□ 0.56
SMC6-206ENST00000446852 FEZF2Q8TBJ5 459 aa18.53■□□□□ 0.56
SMC6-206ENST00000446852 MAGOHBQ96A72 148 aaKnown RBP18.53■□□□□ 0.56
SMC6-206ENST00000446852 HERPUD2Q9BSE4 406 aa18.53■□□□□ 0.56
SMC6-206ENST00000446852 AGAP1Q9UPQ3 857 aa18.53■□□□□ 0.56
SMC6-206ENST00000446852 HAS3O00219 553 aa18.52■□□□□ 0.56
SMC6-206ENST00000446852 IGHA2P01877 340 aa18.52■□□□□ 0.56
SMC6-206ENST00000446852 CALB1P05937 261 aa18.52■□□□□ 0.56
SMC6-206ENST00000446852 ATICP31939 592 aa18.52■□□□□ 0.56
SMC6-206ENST00000446852 DUPD1Q68J44 220 aa18.52■□□□□ 0.56
SMC6-206ENST00000446852 SLC4A11Q8NBS3 891 aa18.52■□□□□ 0.56
SMC6-206ENST00000446852 PIK3R5Q8WYR1 880 aa18.52■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms