RNA–Protein interactions for RNA: ENST00000446349.5

PTPN3-204, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 1 (best) BASIC

Gene PTPN3, Length 8,630 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-204ENST00000446349 UNC45AQ9H3U1 944 aa8.96□□□□□ -0.98
PTPN3-204ENST00000446349 DPP3Q9NY33 737 aa8.96□□□□□ -0.98
PTPN3-204ENST00000446349 SLC9A3R1O14745 358 aaPredicted RBP8.96□□□□□ -0.98
PTPN3-204ENST00000446349 BMP10O95393 424 aa8.96□□□□□ -0.98
PTPN3-204ENST00000446349 GPD1P21695 349 aa8.96□□□□□ -0.98
PTPN3-204ENST00000446349 IFNAR2P48551 515 aa8.96□□□□□ -0.98
PTPN3-204ENST00000446349 BCAT1P54687 386 aa8.96□□□□□ -0.98
PTPN3-204ENST00000446349 TP53BP2Q13625 1128 aa8.96□□□□□ -0.98
PTPN3-204ENST00000446349 LBRQ14739 615 aaKnown RBP8.96□□□□□ -0.98
PTPN3-204ENST00000446349 ZDHHC17Q8IUH5 632 aa8.96□□□□□ -0.98
PTPN3-204ENST00000446349 DTNBP1Q96EV8 351 aa8.96□□□□□ -0.98
PTPN3-204ENST00000446349 PITPNM3Q9BZ71 974 aa8.96□□□□□ -0.98
PTPN3-204ENST00000446349 JMJD4Q9H9V9 463 aa8.96□□□□□ -0.98
PTPN3-204ENST00000446349 SARS2Q9NP81 518 aaKnown RBP8.96□□□□□ -0.98
PTPN3-204ENST00000446349 NFIAQ12857 509 aa8.96□□□□□ -0.98
PTPN3-204ENST00000446349 SLC18A3Q16572 532 aa8.96□□□□□ -0.98
PTPN3-204ENST00000446349 TMCO4Q5TGY1 634 aa8.96□□□□□ -0.98
PTPN3-204ENST00000446349 MPZL3Q6UWV2 235 aa8.96□□□□□ -0.98
PTPN3-204ENST00000446349 FTHL17Q9BXU8 183 aa8.96□□□□□ -0.98
PTPN3-204ENST00000446349 SPATC1LQ9H0A9 340 aa8.96□□□□□ -0.98
PTPN3-204ENST00000446349 TBX20Q9UMR3 447 aa8.96□□□□□ -0.98
PTPN3-204ENST00000446349 SYNCRIPO60506 623 aaKnown RBP8.95□□□□□ -0.98
PTPN3-204ENST00000446349 Q4G0T1 1027 aa8.95□□□□□ -0.98
PTPN3-204ENST00000446349 C10orf120Q5SQS8 335 aa8.95□□□□□ -0.98
PTPN3-204ENST00000446349 TRIM59Q8IWR1 403 aa8.95□□□□□ -0.98
PTPN3-204ENST00000446349 RBBP8NLQ8NC74 664 aaPredicted RBP8.95□□□□□ -0.98
PTPN3-204ENST00000446349 MAML1Q92585 1016 aa8.95□□□□□ -0.98
PTPN3-204ENST00000446349 DACT3Q96B18 629 aaPredicted RBP8.95□□□□□ -0.98
PTPN3-204ENST00000446349 GPR63Q9BZJ6 419 aa8.95□□□□□ -0.98
PTPN3-204ENST00000446349 LIMA1Q9UHB6 759 aaKnown RBP8.95□□□□□ -0.98
PTPN3-204ENST00000446349 ITGA11Q9UKX5 1188 aa8.95□□□□□ -0.98
PTPN3-204ENST00000446349 OPLAHO14841 1288 aa8.95□□□□□ -0.98
PTPN3-204ENST00000446349 E2F6O75461 281 aa8.95□□□□□ -0.98
PTPN3-204ENST00000446349 ADCY1Q08828 1119 aa8.95□□□□□ -0.98
PTPN3-204ENST00000446349 ATG4CQ96DT6 458 aa8.95□□□□□ -0.98
PTPN3-204ENST00000446349 REEP2Q9BRK0 252 aa8.95□□□□□ -0.98
PTPN3-204ENST00000446349 CINPQ9BW66 212 aaPredicted RBP8.95□□□□□ -0.98
PTPN3-204ENST00000446349 DCLK3Q9C098 648 aa8.95□□□□□ -0.98
PTPN3-204ENST00000446349 VPS11Q9H270 941 aa8.95□□□□□ -0.98
PTPN3-204ENST00000446349 TAF1DQ9H5J8 278 aaPredicted RBP8.95□□□□□ -0.98
PTPN3-204ENST00000446349 KLHL11Q9NVR0 708 aa8.95□□□□□ -0.98
PTPN3-204ENST00000446349 MST1RQ04912 1400 aa8.95□□□□□ -0.98
PTPN3-204ENST00000446349 ENC1O14682 589 aa8.95□□□□□ -0.98
PTPN3-204ENST00000446349 GFAPP14136 432 aa8.95□□□□□ -0.98
PTPN3-204ENST00000446349 CENPCQ03188 943 aa8.95□□□□□ -0.98
PTPN3-204ENST00000446349 C2orf54Q08AI8 447 aa8.95□□□□□ -0.98
PTPN3-204ENST00000446349 PKN3Q6P5Z2 889 aa8.95□□□□□ -0.98
PTPN3-204ENST00000446349 TRMT10CQ7L0Y3 403 aaKnown RBP8.95□□□□□ -0.98
PTPN3-204ENST00000446349 ZNF467Q7Z7K2 595 aaPredicted RBP8.95□□□□□ -0.98
PTPN3-204ENST00000446349 CHSY1Q86X52 802 aa8.95□□□□□ -0.98
PTPN3-204ENST00000446349 BRD8Q9H0E9 1235 aa8.95□□□□□ -0.98
PTPN3-204ENST00000446349 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP8.95□□□□□ -0.98
PTPN3-204ENST00000446349 PCSK1NQ9UHG2 260 aa8.95□□□□□ -0.98
PTPN3-204ENST00000446349 DBR1Q9UK59 544 aaKnown RBP8.95□□□□□ -0.98
PTPN3-204ENST00000446349 SRGAP2O75044 1071 aa8.95□□□□□ -0.98
PTPN3-204ENST00000446349 ACADMP11310 421 aa8.95□□□□□ -0.98
PTPN3-204ENST00000446349 STARD3Q14849 445 aa8.95□□□□□ -0.98
PTPN3-204ENST00000446349 PDK2Q15119 407 aa8.95□□□□□ -0.98
PTPN3-204ENST00000446349 PTPROQ16827 1216 aa8.95□□□□□ -0.98
PTPN3-204ENST00000446349 CCDC137Q6PK04 289 aaKnown RBP8.95□□□□□ -0.98
PTPN3-204ENST00000446349 SUGP1Q8IWZ8 645 aaKnown RBP8.95□□□□□ -0.98
PTPN3-204ENST00000446349 KRCC1Q9NPI7 259 aaPredicted RBP8.95□□□□□ -0.98
PTPN3-204ENST00000446349 TLR8Q9NR97 1041 aaKnown RBP8.95□□□□□ -0.98
PTPN3-204ENST00000446349 KRT82Q9NSB4 513 aa8.95□□□□□ -0.98
PTPN3-204ENST00000446349 KIF17Q9P2E2 1029 aa8.95□□□□□ -0.98
PTPN3-204ENST00000446349 POLBP06746 335 aa8.95□□□□□ -0.98
PTPN3-204ENST00000446349 VDRP11473 427 aa8.95□□□□□ -0.98
PTPN3-204ENST00000446349 SPRP35270 261 aaPredicted RBP8.95□□□□□ -0.98
PTPN3-204ENST00000446349 IRAK1BP1Q5VVH5 260 aa8.95□□□□□ -0.98
PTPN3-204ENST00000446349 ANKRD40Q6AI12 368 aa8.95□□□□□ -0.98
PTPN3-204ENST00000446349 PTRHD1Q6GMV3 140 aaKnown RBP8.95□□□□□ -0.98
PTPN3-204ENST00000446349 SETD3Q86TU7 594 aaPredicted RBP8.95□□□□□ -0.98
PTPN3-204ENST00000446349 KLHL29Q96CT2 875 aa8.95□□□□□ -0.98
PTPN3-204ENST00000446349 CYTH2Q99418 400 aa8.95□□□□□ -0.98
PTPN3-204ENST00000446349 ARHGEF38Q9NXL2 777 aa8.95□□□□□ -0.98
PTPN3-204ENST00000446349 NAGPAQ9UK23 515 aa8.95□□□□□ -0.98
PTPN3-204ENST00000446349 LSM8O95777 96 aaKnown RBP8.95□□□□□ -0.98
PTPN3-204ENST00000446349 ITIH2P19823 946 aa8.95□□□□□ -0.98
PTPN3-204ENST00000446349 ITGA9Q13797 1035 aa8.95□□□□□ -0.98
PTPN3-204ENST00000446349 GLYCTKQ8IVS8 523 aa8.95□□□□□ -0.98
PTPN3-204ENST00000446349 HPS3Q969F9 1004 aa8.95□□□□□ -0.98
PTPN3-204ENST00000446349 TTC17Q96AE7 1141 aa8.95□□□□□ -0.98
PTPN3-204ENST00000446349 FAM47E-STBD1D6RA91 191 aa8.94□□□□□ -0.98
PTPN3-204ENST00000446349 H0Y626 953 aa8.94□□□□□ -0.98
PTPN3-204ENST00000446349 FASTKD1Q53R41 847 aaKnown RBP8.94□□□□□ -0.98
PTPN3-204ENST00000446349 ACRBPQ8NEB7 543 aa8.94□□□□□ -0.98
PTPN3-204ENST00000446349 LOC102724159A0A0B4J2E5 919 aa8.94□□□□□ -0.98
PTPN3-204ENST00000446349 C5orf58C9J3I9 102 aa8.94□□□□□ -0.98
PTPN3-204ENST00000446349 PWP2Q15269 919 aaKnown RBP8.94□□□□□ -0.98
PTPN3-204ENST00000446349 PABPC1LQ4VXU2 614 aaKnown RBP8.94□□□□□ -0.98
PTPN3-204ENST00000446349 EXT2Q93063 718 aa8.94□□□□□ -0.98
PTPN3-204ENST00000446349 OSBPL9Q96SU4 736 aa8.94□□□□□ -0.98
PTPN3-204ENST00000446349 ADGRE3Q9BY15 652 aa8.94□□□□□ -0.98
PTPN3-204ENST00000446349 ZCCHC2Q9C0B9 1178 aaKnown RBP8.94□□□□□ -0.98
PTPN3-204ENST00000446349 RGL1Q9NZL6 768 aa8.94□□□□□ -0.98
PTPN3-204ENST00000446349 PKD2L2Q9NZM6 624 aa8.94□□□□□ -0.98
PTPN3-204ENST00000446349 CCDC78A2IDD5 438 aa8.94□□□□□ -0.98
PTPN3-204ENST00000446349 KCNN4O15554 427 aa8.94□□□□□ -0.98
PTPN3-204ENST00000446349 PMS2P54278 862 aa8.94□□□□□ -0.98
PTPN3-204ENST00000446349 POU5F1BQ06416 359 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms