RNA–Protein interactions for RNA: ENST00000446155.1

HMGB1P48-201, Transcript of high mobility group box 1 pseudogene 48, humanhuman

BASIC

Gene HMGB1P48, Length 598 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P48-201ENST00000446155 RARBP10826 455 aa5.46□□□□□ -1.54
HMGB1P48-201ENST00000446155 CKBP12277 381 aa5.46□□□□□ -1.54
HMGB1P48-201ENST00000446155 NPR1P16066 1061 aa5.46□□□□□ -1.54
HMGB1P48-201ENST00000446155 CD53P19397 219 aa5.46□□□□□ -1.54
HMGB1P48-201ENST00000446155 ARFIP2P53365 341 aa5.46□□□□□ -1.54
HMGB1P48-201ENST00000446155 LLGL1Q15334 1064 aa5.46□□□□□ -1.54
HMGB1P48-201ENST00000446155 CCDC157Q569K6 752 aa5.46□□□□□ -1.54
HMGB1P48-201ENST00000446155 MIIPQ5JXC2 388 aa5.46□□□□□ -1.54
HMGB1P48-201ENST00000446155 APOA5Q6Q788 366 aa5.46□□□□□ -1.54
HMGB1P48-201ENST00000446155 CLEC4GQ6UXB4 293 aa5.46□□□□□ -1.54
HMGB1P48-201ENST00000446155 TOGARAM2Q6ZUX3 1019 aa5.46□□□□□ -1.54
HMGB1P48-201ENST00000446155 FAM156AQ8NDB6 213 aa5.46□□□□□ -1.54
HMGB1P48-201ENST00000446155 TBC1D15Q8TC07 691 aa5.46□□□□□ -1.54
HMGB1P48-201ENST00000446155 CPT1CQ8TCG5 803 aa5.46□□□□□ -1.54
HMGB1P48-201ENST00000446155 BRIX1Q8TDN6 353 aaKnown RBP5.46□□□□□ -1.54
HMGB1P48-201ENST00000446155 SCAMP4Q969E2 229 aa5.46□□□□□ -1.54
HMGB1P48-201ENST00000446155 GJA10Q969M2 543 aa5.46□□□□□ -1.54
HMGB1P48-201ENST00000446155 ZNF503Q96F45 646 aa5.46□□□□□ -1.54
HMGB1P48-201ENST00000446155 PHACTR3Q96KR7 559 aa5.46□□□□□ -1.54
HMGB1P48-201ENST00000446155 VKORC1Q9BQB6 163 aa5.46□□□□□ -1.54
HMGB1P48-201ENST00000446155 TLR10Q9BXR5 811 aa5.46□□□□□ -1.54
HMGB1P48-201ENST00000446155 BRD9Q9H8M2 597 aa5.46□□□□□ -1.54
HMGB1P48-201ENST00000446155 ARMT1Q9H993 441 aa5.46□□□□□ -1.54
HMGB1P48-201ENST00000446155 CASS4Q9NQ75 786 aa5.46□□□□□ -1.54
HMGB1P48-201ENST00000446155 CFAP97Q9P2B7 532 aa5.46□□□□□ -1.54
HMGB1P48-201ENST00000446155 HSFX1Q9UBD0 423 aa5.46□□□□□ -1.54
HMGB1P48-201ENST00000446155 STAP2Q9UGK3 403 aa5.46□□□□□ -1.54
HMGB1P48-201ENST00000446155 PHTF1Q9UMS5 762 aa5.46□□□□□ -1.54
HMGB1P48-201ENST00000446155 USP15Q9Y4E8 981 aaPredicted RBP5.46□□□□□ -1.54
HMGB1P48-201ENST00000446155 FAM20BO75063 409 aa5.45□□□□□ -1.54
HMGB1P48-201ENST00000446155 RPS6KA4O75676 772 aa5.45□□□□□ -1.54
HMGB1P48-201ENST00000446155 SCAF4O95104 1147 aaKnown RBP5.45□□□□□ -1.54
HMGB1P48-201ENST00000446155 HDCP19113 662 aa5.45□□□□□ -1.54
HMGB1P48-201ENST00000446155 FGFR4P22455 802 aa5.45□□□□□ -1.54
HMGB1P48-201ENST00000446155 BUD31P41223 144 aaPredicted RBP5.45□□□□□ -1.54
HMGB1P48-201ENST00000446155 TRAPPC10P48553 1259 aa5.45□□□□□ -1.54
HMGB1P48-201ENST00000446155 OCA2Q04671 838 aa5.45□□□□□ -1.54
HMGB1P48-201ENST00000446155 CNN3Q15417 329 aaKnown RBP5.45□□□□□ -1.54
HMGB1P48-201ENST00000446155 NRN1LQ496H8 165 aa5.45□□□□□ -1.54
HMGB1P48-201ENST00000446155 ANO1Q5XXA6 986 aa5.45□□□□□ -1.54
HMGB1P48-201ENST00000446155 TSHZ3Q63HK5 1081 aa5.45□□□□□ -1.54
HMGB1P48-201ENST00000446155 RHOUQ7L0Q8 258 aa5.45□□□□□ -1.54
HMGB1P48-201ENST00000446155 SPRED1Q7Z699 444 aa5.45□□□□□ -1.54
HMGB1P48-201ENST00000446155 NME8Q8N427 588 aa5.45□□□□□ -1.54
HMGB1P48-201ENST00000446155 Q8NA96 180 aa5.45□□□□□ -1.54
HMGB1P48-201ENST00000446155 VPS37AQ8NEZ2 397 aa5.45□□□□□ -1.54
HMGB1P48-201ENST00000446155 IL31RAQ8NI17 732 aa5.45□□□□□ -1.54
HMGB1P48-201ENST00000446155 ANKS1AQ92625 1134 aa5.45□□□□□ -1.54
HMGB1P48-201ENST00000446155 MARS2Q96GW9 593 aaKnown RBP5.45□□□□□ -1.54
HMGB1P48-201ENST00000446155 DPH1Q9BZG8 443 aa5.45□□□□□ -1.54
HMGB1P48-201ENST00000446155 BHMT2Q9H2M3 363 aa5.45□□□□□ -1.54
HMGB1P48-201ENST00000446155 RSAD1Q9HA92 442 aa5.45□□□□□ -1.54
HMGB1P48-201ENST00000446155 PLCB1Q9NQ66 1216 aa5.45□□□□□ -1.54
HMGB1P48-201ENST00000446155 PARPBPQ9NWS1 579 aa5.45□□□□□ -1.54
HMGB1P48-201ENST00000446155 TRPM5Q9NZQ8 1165 aa5.45□□□□□ -1.54
HMGB1P48-201ENST00000446155 PCDHA6Q9UN73 950 aa5.45□□□□□ -1.54
HMGB1P48-201ENST00000446155 AGAP1Q9UPQ3 857 aa5.45□□□□□ -1.54
HMGB1P48-201ENST00000446155 A0A1B0GTW7 788 aa5.44□□□□□ -1.54
HMGB1P48-201ENST00000446155 MYO1FO00160 1098 aa5.44□□□□□ -1.54
HMGB1P48-201ENST00000446155 PHGDHO43175 533 aaKnown RBP5.44□□□□□ -1.54
HMGB1P48-201ENST00000446155 RECQL4O94761 1208 aa5.44□□□□□ -1.54
HMGB1P48-201ENST00000446155 CFIP05156 583 aa5.44□□□□□ -1.54
HMGB1P48-201ENST00000446155 GNAI3P08754 354 aa5.44□□□□□ -1.54
HMGB1P48-201ENST00000446155 SOX8P57073 446 aa5.44□□□□□ -1.54
HMGB1P48-201ENST00000446155 GNAI1P63096 354 aa5.44□□□□□ -1.54
HMGB1P48-201ENST00000446155 FAM193AP78312 1265 aa5.44□□□□□ -1.54
HMGB1P48-201ENST00000446155 POU6F2P78424 691 aaPredicted RBP5.44□□□□□ -1.54
HMGB1P48-201ENST00000446155 DGCR2P98153 550 aa5.44□□□□□ -1.54
HMGB1P48-201ENST00000446155 EXOSC9Q06265 439 aaKnown RBP5.44□□□□□ -1.54
HMGB1P48-201ENST00000446155 FOXE3Q13461 319 aa5.44□□□□□ -1.54
HMGB1P48-201ENST00000446155 BEAN1Q3B7T3 259 aa5.44□□□□□ -1.54
HMGB1P48-201ENST00000446155 B3GNTL1Q67FW5 361 aaPredicted RBP5.44□□□□□ -1.54
HMGB1P48-201ENST00000446155 PPP1R32Q7Z5V6 425 aa5.44□□□□□ -1.54
HMGB1P48-201ENST00000446155 PDPRQ8NCN5 879 aa5.44□□□□□ -1.54
HMGB1P48-201ENST00000446155 SH3RF3Q8TEJ3 882 aaPredicted RBP5.44□□□□□ -1.54
HMGB1P48-201ENST00000446155 TNPO1Q92973 898 aaKnown RBP5.44□□□□□ -1.54
HMGB1P48-201ENST00000446155 FUBP1Q96AE4 644 aaKnown RBP5.44□□□□□ -1.54
HMGB1P48-201ENST00000446155 SENP7Q9BQF6 1050 aa5.44□□□□□ -1.54
HMGB1P48-201ENST00000446155 TRIM54Q9BYV2 358 aa5.44□□□□□ -1.54
HMGB1P48-201ENST00000446155 RNPEPQ9H4A4 650 aa5.44□□□□□ -1.54
HMGB1P48-201ENST00000446155 ST6GALNAC1Q9NSC7 600 aaPredicted RBP5.44□□□□□ -1.54
HMGB1P48-201ENST00000446155 ETAA1Q9NY74 926 aa5.44□□□□□ -1.54
HMGB1P48-201ENST00000446155 ATP11BQ9Y2G3 1177 aa5.44□□□□□ -1.54
HMGB1P48-201ENST00000446155 MED16Q9Y2X0 877 aa5.44□□□□□ -1.54
HMGB1P48-201ENST00000446155 FPGT-TNNI3KV9GXZ4 949 aa5.44□□□□□ -1.54
HMGB1P48-201ENST00000446155 ZNF785A8K8V0 405 aa5.43□□□□□ -1.54
HMGB1P48-201ENST00000446155 RNASET2O00584 256 aaKnown RBP5.43□□□□□ -1.54
HMGB1P48-201ENST00000446155 DNAJB5O75953 348 aa5.43□□□□□ -1.54
HMGB1P48-201ENST00000446155 NCR1O76036 304 aa5.43□□□□□ -1.54
HMGB1P48-201ENST00000446155 CHEK2O96017 543 aa5.43□□□□□ -1.54
HMGB1P48-201ENST00000446155 PHKA1P46020 1223 aa5.43□□□□□ -1.54
HMGB1P48-201ENST00000446155 SEMA5AQ13591 1074 aa5.43□□□□□ -1.54
HMGB1P48-201ENST00000446155 CRB2Q5IJ48 1285 aa5.43□□□□□ -1.54
HMGB1P48-201ENST00000446155 KHDC1LQ5JSQ8 128 aa5.43□□□□□ -1.54
HMGB1P48-201ENST00000446155 FNDC7Q5VTL7 733 aa5.43□□□□□ -1.54
HMGB1P48-201ENST00000446155 TMPRSS9Q7Z410 1059 aa5.43□□□□□ -1.54
HMGB1P48-201ENST00000446155 MAPKAPK5Q8IW41 473 aa5.43□□□□□ -1.54
HMGB1P48-201ENST00000446155 ZNF276Q8N554 614 aa5.43□□□□□ -1.54
HMGB1P48-201ENST00000446155 AOPEPQ8N6M6 819 aa5.43□□□□□ -1.54
HMGB1P48-201ENST00000446155 PAF1Q8N7H5 531 aa5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms