RNA–Protein interactions for RNA: ENST00000445692.5

APLF-203, Transcript of aprataxin and PNKP like factor, humanhuman

TSL 5

Gene APLF, Length 3,906 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APLF-203ENST00000445692 CHCHD3Q9NX63 227 aaKnown RBP12.7□□□□□ -0.38
APLF-203ENST00000445692 RPS6KA4O75676 772 aa12.69□□□□□ -0.38
APLF-203ENST00000445692 WEE2P0C1S8 567 aa12.69□□□□□ -0.38
APLF-203ENST00000445692 MMEL1Q495T6 779 aa12.69□□□□□ -0.38
APLF-203ENST00000445692 IL31Q6EBC2 164 aa12.69□□□□□ -0.38
APLF-203ENST00000445692 UCMAQ8WVF2 138 aa12.69□□□□□ -0.38
APLF-203ENST00000445692 ATP2A3Q93084 1043 aa12.69□□□□□ -0.38
APLF-203ENST00000445692 SENP7Q9BQF6 1050 aa12.69□□□□□ -0.38
APLF-203ENST00000445692 MSTO1Q9BUK6 570 aa12.69□□□□□ -0.38
APLF-203ENST00000445692 TMEM120AQ9BXJ8 343 aa12.69□□□□□ -0.38
APLF-203ENST00000445692 FHDC1Q9C0D6 1143 aaPredicted RBP12.69□□□□□ -0.38
APLF-203ENST00000445692 GABBR1Q9UBS5 961 aa12.69□□□□□ -0.38
APLF-203ENST00000445692 CNOT7Q9UIV1 285 aaKnown RBP12.69□□□□□ -0.38
APLF-203ENST00000445692 SPATA31A6Q5VVP1 1343 aa12.69□□□□□ -0.38
APLF-203ENST00000445692 VCAM1P19320 739 aa12.69□□□□□ -0.38
APLF-203ENST00000445692 MX2P20592 715 aa12.69□□□□□ -0.38
APLF-203ENST00000445692 IGBP1P78318 339 aa12.69□□□□□ -0.38
APLF-203ENST00000445692 NFX1Q12986 1120 aaKnown RBP12.69□□□□□ -0.38
APLF-203ENST00000445692 C7orf31Q8N865 590 aa12.69□□□□□ -0.38
APLF-203ENST00000445692 CCNYQ8ND76 341 aa12.69□□□□□ -0.38
APLF-203ENST00000445692 DEPDC1BQ8WUY9 529 aa12.69□□□□□ -0.38
APLF-203ENST00000445692 FAM81BQ96LP2 452 aa12.69□□□□□ -0.38
APLF-203ENST00000445692 ZNF317Q96PQ6 595 aaPredicted RBP12.69□□□□□ -0.38
APLF-203ENST00000445692 TRIM56Q9BRZ2 755 aaKnown RBP12.69□□□□□ -0.38
APLF-203ENST00000445692 RANBP17Q9H2T7 1088 aaKnown RBP12.69□□□□□ -0.38
APLF-203ENST00000445692 GRHL1Q9NZI5 618 aa12.69□□□□□ -0.38
APLF-203ENST00000445692 XPO7Q9UIA9 1087 aaKnown RBP12.69□□□□□ -0.38
APLF-203ENST00000445692 SMG5Q9UPR3 1016 aaKnown RBP12.69□□□□□ -0.38
APLF-203ENST00000445692 SLIT2O94813 1529 aa12.69□□□□□ -0.38
APLF-203ENST00000445692 K7ERI5 159 aa12.69□□□□□ -0.38
APLF-203ENST00000445692 PDE5AO76074 875 aa12.69□□□□□ -0.38
APLF-203ENST00000445692 USP1O94782 785 aa12.69□□□□□ -0.38
APLF-203ENST00000445692 YWHABP31946 246 aaKnown RBP12.69□□□□□ -0.38
APLF-203ENST00000445692 EFTUD2Q15029 972 aaKnown RBP eCLIP12.69□□□□□ -0.38
APLF-203ENST00000445692 MTFR1Q15390 333 aa12.69□□□□□ -0.38
APLF-203ENST00000445692 DLGAP5Q15398 846 aa12.69□□□□□ -0.38
APLF-203ENST00000445692 CHI3L2Q15782 390 aa12.69□□□□□ -0.38
APLF-203ENST00000445692 SWSAP1Q6NVH7 229 aa12.69□□□□□ -0.38
APLF-203ENST00000445692 TMEM179Q6ZVK1 233 aa12.69□□□□□ -0.38
APLF-203ENST00000445692 ZNF354CQ86Y25 554 aa12.69□□□□□ -0.38
APLF-203ENST00000445692 NME8Q8N427 588 aa12.69□□□□□ -0.38
APLF-203ENST00000445692 FBXO36Q8NEA4 188 aa12.69□□□□□ -0.38
APLF-203ENST00000445692 SREK1Q8WXA9 508 aaKnown RBP12.69□□□□□ -0.38
APLF-203ENST00000445692 ZNF75CPQ92670 426 aaPredicted RBP12.69□□□□□ -0.38
APLF-203ENST00000445692 CCDC97Q96F63 343 aaPredicted RBP12.69□□□□□ -0.38
APLF-203ENST00000445692 RAB6BQ9NRW1 208 aa12.69□□□□□ -0.38
APLF-203ENST00000445692 CYP39A1Q9NYL5 469 aa12.69□□□□□ -0.38
APLF-203ENST00000445692 TRIM49D1C9J1S8 452 aa12.69□□□□□ -0.38
APLF-203ENST00000445692 ZBED1O96006 694 aa12.69□□□□□ -0.38
APLF-203ENST00000445692 ECHS1P30084 290 aa12.69□□□□□ -0.38
APLF-203ENST00000445692 RFC1P35251 1148 aaPredicted RBP12.69□□□□□ -0.38
APLF-203ENST00000445692 PPP4CP60510 307 aa12.69□□□□□ -0.38
APLF-203ENST00000445692 USP4Q13107 963 aa12.69□□□□□ -0.38
APLF-203ENST00000445692 ACAD10Q6JQN1 1059 aa12.69□□□□□ -0.38
APLF-203ENST00000445692 TMEM143Q96AN5 459 aa12.69□□□□□ -0.38
APLF-203ENST00000445692 CENPTQ96BT3 561 aa12.69□□□□□ -0.38
APLF-203ENST00000445692 TRIM11Q96F44 468 aa12.69□□□□□ -0.38
APLF-203ENST00000445692 RBM41Q96IZ5 413 aaKnown RBP12.69□□□□□ -0.38
APLF-203ENST00000445692 DCLK3Q9C098 648 aa12.69□□□□□ -0.38
APLF-203ENST00000445692 O00370 1275 aa12.68□□□□□ -0.38
APLF-203ENST00000445692 KRT37O76014 449 aa12.68□□□□□ -0.38
APLF-203ENST00000445692 SLITRK3O94933 977 aa12.68□□□□□ -0.38
APLF-203ENST00000445692 P4HBP07237 508 aaKnown RBP12.68□□□□□ -0.38
APLF-203ENST00000445692 PYGBP11216 843 aa12.68□□□□□ -0.38
APLF-203ENST00000445692 PTPN4P29074 926 aa12.68□□□□□ -0.38
APLF-203ENST00000445692 FOXN2P32314 431 aa12.68□□□□□ -0.38
APLF-203ENST00000445692 WLSQ5T9L3 541 aa12.68□□□□□ -0.38
APLF-203ENST00000445692 RFWD3Q6PCD5 774 aa12.68□□□□□ -0.38
APLF-203ENST00000445692 IYDQ6PHW0 289 aa12.68□□□□□ -0.38
APLF-203ENST00000445692 CRELD2Q6UXH1 353 aaPredicted RBP12.68□□□□□ -0.38
APLF-203ENST00000445692 EPS8L1Q8TE68 723 aa12.68□□□□□ -0.38
APLF-203ENST00000445692 CLPTM1LQ96KA5 538 aa12.68□□□□□ -0.38
APLF-203ENST00000445692 TTC25Q96NG3 672 aa12.68□□□□□ -0.38
APLF-203ENST00000445692 PAFAH2Q99487 392 aa12.68□□□□□ -0.38
APLF-203ENST00000445692 DDX18Q9NVP1 670 aaKnown RBP12.68□□□□□ -0.38
APLF-203ENST00000445692 INO80B-WBP1J3KQ70 363 aa12.68□□□□□ -0.38
APLF-203ENST00000445692 SUPT3HO75486 399 aa12.68□□□□□ -0.38
APLF-203ENST00000445692 SPATA31C1P0DKV0 1188 aa12.68□□□□□ -0.38
APLF-203ENST00000445692 EIF3EP60228 445 aaKnown RBP12.68□□□□□ -0.38
APLF-203ENST00000445692 BNIP1Q12981 228 aa12.68□□□□□ -0.38
APLF-203ENST00000445692 NR1H3Q13133 447 aa12.68□□□□□ -0.38
APLF-203ENST00000445692 MED21Q13503 144 aa12.68□□□□□ -0.38
APLF-203ENST00000445692 ZNF572Q7Z3I7 529 aaPredicted RBP12.68□□□□□ -0.38
APLF-203ENST00000445692 WDR75Q8IWA0 830 aaKnown RBP12.68□□□□□ -0.38
APLF-203ENST00000445692 EMC1Q8N766 993 aa12.68□□□□□ -0.38
APLF-203ENST00000445692 RNF148Q8N7C7 305 aa12.68□□□□□ -0.38
APLF-203ENST00000445692 AGBL1Q96MI9 1066 aa12.68□□□□□ -0.38
APLF-203ENST00000445692 INO80BQ9C086 356 aaPredicted RBP12.68□□□□□ -0.38
APLF-203ENST00000445692 WHRNQ9P202 907 aa12.68□□□□□ -0.38
APLF-203ENST00000445692 SEL1LQ9UBV2 794 aa12.68□□□□□ -0.38
APLF-203ENST00000445692 POLLQ9UGP5 575 aa12.68□□□□□ -0.38
APLF-203ENST00000445692 MYH15Q9Y2K3 1946 aa12.68□□□□□ -0.38
APLF-203ENST00000445692 KAT6AQ92794 2004 aa12.68□□□□□ -0.38
APLF-203ENST00000445692 DDTLA6NHG4 134 aaPredicted RBP12.68□□□□□ -0.38
APLF-203ENST00000445692 CES2O00748 559 aa12.68□□□□□ -0.38
APLF-203ENST00000445692 DKC1O60832 514 aaKnown RBP eCLIP12.68□□□□□ -0.38
APLF-203ENST00000445692 TAC1P20366 129 aa12.68□□□□□ -0.38
APLF-203ENST00000445692 PSMC1P62191 440 aaKnown RBP12.68□□□□□ -0.38
APLF-203ENST00000445692 SLC1A5Q15758 541 aa12.68□□□□□ -0.38
APLF-203ENST00000445692 MFSD7Q6UXD7 560 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms