RNA–Protein interactions for RNA: ENST00000444475.5

UBR3-206, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 5

Gene UBR3, Length 3,821 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-206ENST00000444475 CYP8B1Q9UNU6 501 aa4.24□□□□□ -1.73
UBR3-206ENST00000444475 SSX2IPQ9Y2D8 614 aa4.24□□□□□ -1.73
UBR3-206ENST00000444475 FNDC3AQ9Y2H6 1198 aaKnown RBP4.24□□□□□ -1.73
UBR3-206ENST00000444475 CYP46A1Q9Y6A2 500 aa4.24□□□□□ -1.73
UBR3-206ENST00000444475 GLI2P10070 1586 aa4.24□□□□□ -1.73
UBR3-206ENST00000444475 H0YIN7 160 aa4.24□□□□□ -1.73
UBR3-206ENST00000444475 PROM1O43490 865 aa4.24□□□□□ -1.73
UBR3-206ENST00000444475 GAS7O60861 476 aa4.24□□□□□ -1.73
UBR3-206ENST00000444475 NOL3O60936 208 aaKnown RBP4.24□□□□□ -1.73
UBR3-206ENST00000444475 IL18RAPO95256 599 aa4.24□□□□□ -1.73
UBR3-206ENST00000444475 SLU7O95391 586 aaKnown RBP4.24□□□□□ -1.73
UBR3-206ENST00000444475 YEATS4O95619 227 aa4.24□□□□□ -1.73
UBR3-206ENST00000444475 PNPP00491 289 aa4.24□□□□□ -1.73
UBR3-206ENST00000444475 TROVE2P10155 538 aaKnown RBP eCLIP4.24□□□□□ -1.73
UBR3-206ENST00000444475 CYP11B2P19099 503 aa4.24□□□□□ -1.73
UBR3-206ENST00000444475 RABIFP47224 123 aa4.24□□□□□ -1.73
UBR3-206ENST00000444475 PSMC6P62333 389 aa4.24□□□□□ -1.73
UBR3-206ENST00000444475 ITGA7Q13683 1181 aa4.24□□□□□ -1.73
UBR3-206ENST00000444475 MLECQ14165 292 aa4.24□□□□□ -1.73
UBR3-206ENST00000444475 SUZ12Q15022 739 aaKnown RBP4.24□□□□□ -1.73
UBR3-206ENST00000444475 SF1Q15637 639 aaKnown RBP4.24□□□□□ -1.73
UBR3-206ENST00000444475 TCP11X2Q5H9J9 407 aa4.24□□□□□ -1.73
UBR3-206ENST00000444475 H1FNTQ75WM6 255 aaPredicted RBP4.24□□□□□ -1.73
UBR3-206ENST00000444475 ADGRG6Q86SQ4 1221 aa4.24□□□□□ -1.73
UBR3-206ENST00000444475 C2CD5Q86YS7 1000 aa4.24□□□□□ -1.73
UBR3-206ENST00000444475 HDDC3Q8N4P3 179 aa4.24□□□□□ -1.73
UBR3-206ENST00000444475 AGR3Q8TD06 166 aa4.24□□□□□ -1.73
UBR3-206ENST00000444475 METTL21AQ8WXB1 218 aa4.24□□□□□ -1.73
UBR3-206ENST00000444475 ALG14Q96F25 216 aa4.24□□□□□ -1.73
UBR3-206ENST00000444475 KCTD15Q96SI1 283 aaPredicted RBP4.24□□□□□ -1.73
UBR3-206ENST00000444475 USP44Q9H0E7 712 aa4.24□□□□□ -1.73
UBR3-206ENST00000444475 ZCWPW1Q9H0M4 648 aa4.24□□□□□ -1.73
UBR3-206ENST00000444475 COPS7BQ9H9Q2 264 aaPredicted RBP4.24□□□□□ -1.73
UBR3-206ENST00000444475 CYP26B1Q9NR63 512 aa4.24□□□□□ -1.73
UBR3-206ENST00000444475 SEPT11Q9NVA2 429 aaKnown RBP4.24□□□□□ -1.73
UBR3-206ENST00000444475 OXSMQ9NWU1 459 aa4.24□□□□□ -1.73
UBR3-206ENST00000444475 ABI2Q9NYB9 513 aaPredicted RBP4.24□□□□□ -1.73
UBR3-206ENST00000444475 AKAP7Q9P0M2 348 aaPredicted RBP4.24□□□□□ -1.73
UBR3-206ENST00000444475 IGSF9Q9P2J2 1179 aa4.24□□□□□ -1.73
UBR3-206ENST00000444475 CFTRP13569 1480 aa4.24□□□□□ -1.73
UBR3-206ENST00000444475 TARBP1Q13395 1621 aaKnown RBP4.24□□□□□ -1.73
UBR3-206ENST00000444475 SHROOM2Q13796 1616 aa4.24□□□□□ -1.73
UBR3-206ENST00000444475 KPNA7A9QM74 516 aa4.24□□□□□ -1.73
UBR3-206ENST00000444475 CHURC1-FNTBB4DL54 471 aa4.24□□□□□ -1.73
UBR3-206ENST00000444475 RECQL4O94761 1208 aa4.24□□□□□ -1.73
UBR3-206ENST00000444475 LETM1O95202 739 aaPredicted RBP4.24□□□□□ -1.73
UBR3-206ENST00000444475 EPHX1P07099 455 aa4.24□□□□□ -1.73
UBR3-206ENST00000444475 LTA4HP09960 611 aaKnown RBP4.24□□□□□ -1.73
UBR3-206ENST00000444475 SLFN14P0C7P3 912 aa4.24□□□□□ -1.73
UBR3-206ENST00000444475 ABCD3P28288 659 aa4.24□□□□□ -1.73
UBR3-206ENST00000444475 DHPSP49366 369 aaPredicted RBP4.24□□□□□ -1.73
UBR3-206ENST00000444475 SCNN1GP51170 649 aa4.24□□□□□ -1.73
UBR3-206ENST00000444475 SMAD3P84022 425 aaKnown RBP4.24□□□□□ -1.73
UBR3-206ENST00000444475 AAK1Q2M2I8 961 aa4.24□□□□□ -1.73
UBR3-206ENST00000444475 TMEM266Q2M3C6 531 aa4.24□□□□□ -1.73
UBR3-206ENST00000444475 HFEQ30201 348 aa4.24□□□□□ -1.73
UBR3-206ENST00000444475 TBC1D25Q3MII6 688 aa4.24□□□□□ -1.73
UBR3-206ENST00000444475 CFAP221Q4G0U5 840 aa4.24□□□□□ -1.73
UBR3-206ENST00000444475 SLC39A12Q504Y0 691 aa4.24□□□□□ -1.73
UBR3-206ENST00000444475 SMUG1Q53HV7 270 aa4.24□□□□□ -1.73
UBR3-206ENST00000444475 MPP7Q5T2T1 576 aa4.24□□□□□ -1.73
UBR3-206ENST00000444475 OLFML2BQ68BL8 750 aa4.24□□□□□ -1.73
UBR3-206ENST00000444475 OR7E24Q6IFN5 339 aa4.24□□□□□ -1.73
UBR3-206ENST00000444475 TLK2Q86UE8 772 aa4.24□□□□□ -1.73
UBR3-206ENST00000444475 KRT222Q8N1A0 295 aa4.24□□□□□ -1.73
UBR3-206ENST00000444475 TDRD5Q8NAT2 981 aaKnown RBP4.24□□□□□ -1.73
UBR3-206ENST00000444475 OR1N1Q8NGS0 311 aa4.24□□□□□ -1.73
UBR3-206ENST00000444475 GOLGA5Q8TBA6 731 aa4.24□□□□□ -1.73
UBR3-206ENST00000444475 KHSRPQ92945 711 aaKnown RBP eCLIP4.24□□□□□ -1.733e-8■■■■■ 29
UBR3-206ENST00000444475 OTUD5Q96G74 571 aa4.24□□□□□ -1.73
UBR3-206ENST00000444475 ST6GALNAC4Q9H4F1 302 aa4.24□□□□□ -1.73
UBR3-206ENST00000444475 COQ3Q9NZJ6 369 aa4.24□□□□□ -1.73
UBR3-206ENST00000444475 PCDHA11Q9Y5I1 949 aa4.24□□□□□ -1.73
UBR3-206ENST00000444475 PSAT1Q9Y617 370 aa4.24□□□□□ -1.73
UBR3-206ENST00000444475 MAGI1Q96QZ7 1491 aaPredicted RBP4.24□□□□□ -1.73
UBR3-206ENST00000444475 MAPK13O15264 365 aa4.23□□□□□ -1.73
UBR3-206ENST00000444475 SLC25A17O43808 307 aa4.23□□□□□ -1.73
UBR3-206ENST00000444475 NDUFS2O75306 463 aa4.23□□□□□ -1.73
UBR3-206ENST00000444475 BCAS2O75934 225 aaPredicted RBP4.23□□□□□ -1.73
UBR3-206ENST00000444475 SEC24BO95487 1268 aa4.23□□□□□ -1.73
UBR3-206ENST00000444475 HNRNPA1P09651 372 aaKnown RBP eCLIP4.23□□□□□ -1.73
UBR3-206ENST00000444475 GDI1P31150 447 aa4.23□□□□□ -1.73
UBR3-206ENST00000444475 HOXC8P31273 242 aa4.23□□□□□ -1.73
UBR3-206ENST00000444475 WNT5AP41221 380 aa4.23□□□□□ -1.73
UBR3-206ENST00000444475 STAT5AP42229 794 aa4.23□□□□□ -1.73
UBR3-206ENST00000444475 OR1G1P47890 313 aa4.23□□□□□ -1.73
UBR3-206ENST00000444475 CCNHP51946 323 aaPredicted RBP4.23□□□□□ -1.73
UBR3-206ENST00000444475 OCRLQ01968 901 aa4.23□□□□□ -1.73
UBR3-206ENST00000444475 DPYSL2Q16555 572 aa4.23□□□□□ -1.73
UBR3-206ENST00000444475 CCDC142Q17RM4 750 aa4.23□□□□□ -1.73
UBR3-206ENST00000444475 B3GNT6Q6ZMB0 384 aa4.23□□□□□ -1.73
UBR3-206ENST00000444475 FAM160B2Q86V87 743 aa4.23□□□□□ -1.73
UBR3-206ENST00000444475 CNTN4Q8IWV2 1026 aa4.23□□□□□ -1.73
UBR3-206ENST00000444475 THAP4Q8WY91 577 aa4.23□□□□□ -1.73
UBR3-206ENST00000444475 NXPE3Q969Y0 559 aa4.23□□□□□ -1.73
UBR3-206ENST00000444475 MRPL38Q96DV4 380 aaKnown RBP4.23□□□□□ -1.73
UBR3-206ENST00000444475 C19orf60Q96EN9 201 aa4.23□□□□□ -1.73
UBR3-206ENST00000444475 PIWIL1Q96J94 861 aaKnown RBP4.23□□□□□ -1.73
UBR3-206ENST00000444475 NOX5Q96PH1 765 aa4.23□□□□□ -1.73
UBR3-206ENST00000444475 KLHL25Q9H0H3 589 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms