RNA–Protein interactions for RNA: ENST00000444061.7

SMARCA4-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 4,938 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-204ENST00000444061 CDKL2Q92772 493 aa14.89□□□□□ -0.03
SMARCA4-204ENST00000444061 TBRG4Q969Z0 631 aaKnown RBP eCLIP14.89□□□□□ -0.031e-7■■■■■ 40.8
SMARCA4-204ENST00000444061 SEZ6LQ9BYH1 1024 aa14.89□□□□□ -0.03
SMARCA4-204ENST00000444061 DDX43Q9NXZ2 648 aaKnown RBP14.89□□□□□ -0.03
SMARCA4-204ENST00000444061 DDX56Q9NY93 547 aaKnown RBP14.89□□□□□ -0.03
SMARCA4-204ENST00000444061 UVRAGQ9P2Y5 699 aa14.89□□□□□ -0.03
SMARCA4-204ENST00000444061 MYH14Q7Z406 1995 aaKnown RBP14.89□□□□□ -0.03
SMARCA4-204ENST00000444061 GRAP2O75791 330 aa14.89□□□□□ -0.03
SMARCA4-204ENST00000444061 HEXIM1O94992 359 aaKnown RBP14.89□□□□□ -0.03
SMARCA4-204ENST00000444061 STAMBPO95630 424 aa14.89□□□□□ -0.03
SMARCA4-204ENST00000444061 DEUP1Q05D60 604 aa14.89□□□□□ -0.03
SMARCA4-204ENST00000444061 ORC1Q13415 861 aa14.89□□□□□ -0.03
SMARCA4-204ENST00000444061 FIBCD1Q8N539 461 aa14.89□□□□□ -0.03
SMARCA4-204ENST00000444061 EMILIN2Q9BXX0 1053 aa14.89□□□□□ -0.03
SMARCA4-204ENST00000444061 SP110Q9HB58 689 aa14.89□□□□□ -0.03
SMARCA4-204ENST00000444061 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.89□□□□□ -0.036e-8■■■■□ 22.5
SMARCA4-204ENST00000444061 FNDC3AQ9Y2H6 1198 aaKnown RBP14.89□□□□□ -0.03
SMARCA4-204ENST00000444061 FGGP02679 453 aa14.89□□□□□ -0.03
SMARCA4-204ENST00000444061 ACLYP53396 1101 aa14.89□□□□□ -0.03
SMARCA4-204ENST00000444061 EPHB3P54753 998 aa14.89□□□□□ -0.03
SMARCA4-204ENST00000444061 HTRA3P83110 453 aa14.89□□□□□ -0.03
SMARCA4-204ENST00000444061 DCAF6Q58WW2 860 aa14.89□□□□□ -0.03
SMARCA4-204ENST00000444061 RIN2Q8WYP3 895 aaPredicted RBP14.89□□□□□ -0.03
SMARCA4-204ENST00000444061 TTC1Q99614 292 aa14.89□□□□□ -0.03
SMARCA4-204ENST00000444061 SYT15Q9BQS2 421 aa14.89□□□□□ -0.03
SMARCA4-204ENST00000444061 CYP4F11Q9HBI6 524 aa14.89□□□□□ -0.03
SMARCA4-204ENST00000444061 HES2Q9Y543 173 aa14.89□□□□□ -0.03
SMARCA4-204ENST00000444061 SLC4A7Q9Y6M7 1214 aa14.89□□□□□ -0.03
SMARCA4-204ENST00000444061 NID2Q14112 1375 aa14.89□□□□□ -0.03
SMARCA4-204ENST00000444061 ZBTB22O15209 634 aa14.89□□□□□ -0.03
SMARCA4-204ENST00000444061 SRGAP2O75044 1071 aa14.89□□□□□ -0.03
SMARCA4-204ENST00000444061 CRCPO75575 148 aa14.89□□□□□ -0.03
SMARCA4-204ENST00000444061 FXR1P51114 621 aaKnown RBP eCLIP14.89□□□□□ -0.033e-6■■■□□ 17.4
SMARCA4-204ENST00000444061 GUCY2FP51841 1108 aa14.89□□□□□ -0.03
SMARCA4-204ENST00000444061 IL17AQ16552 155 aa14.89□□□□□ -0.03
SMARCA4-204ENST00000444061 FBXO32Q969P5 355 aa14.89□□□□□ -0.03
SMARCA4-204ENST00000444061 NSRP1Q9H0G5 558 aaKnown RBP14.89□□□□□ -0.03
SMARCA4-204ENST00000444061 PODXLO00592 558 aa14.88□□□□□ -0.03
SMARCA4-204ENST00000444061 WNT7AO00755 349 aa14.88□□□□□ -0.03
SMARCA4-204ENST00000444061 IRF1P10914 325 aa14.88□□□□□ -0.03
SMARCA4-204ENST00000444061 GALCP54803 685 aa14.88□□□□□ -0.03
SMARCA4-204ENST00000444061 TPI1P60174 286 aa14.88□□□□□ -0.03
SMARCA4-204ENST00000444061 GUCY2DQ02846 1103 aa14.88□□□□□ -0.03
SMARCA4-204ENST00000444061 NOMO2Q5JPE7 1267 aa14.88□□□□□ -0.03
SMARCA4-204ENST00000444061 C10orf67Q8IYJ2 551 aa14.88□□□□□ -0.03
SMARCA4-204ENST00000444061 ATP2A3Q93084 1043 aa14.88□□□□□ -0.03
SMARCA4-204ENST00000444061 CDT1Q9H211 546 aa14.88□□□□□ -0.03
SMARCA4-204ENST00000444061 PLCB1Q9NQ66 1216 aa14.88□□□□□ -0.03
SMARCA4-204ENST00000444061 CISHQ9NSE2 258 aa14.88□□□□□ -0.03
SMARCA4-204ENST00000444061 PTCH2Q9Y6C5 1203 aa14.88□□□□□ -0.03
SMARCA4-204ENST00000444061 NEMP1O14524 444 aa14.88□□□□□ -0.03
SMARCA4-204ENST00000444061 ALDH3A1P30838 453 aa14.88□□□□□ -0.03
SMARCA4-204ENST00000444061 DMTNQ08495 405 aa14.88□□□□□ -0.03
SMARCA4-204ENST00000444061 ZNF536O15090 1300 aa14.88□□□□□ -0.03
SMARCA4-204ENST00000444061 CASZ1Q86V15 1759 aa14.88□□□□□ -0.03
SMARCA4-204ENST00000444061 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.88□□□□□ -0.03
SMARCA4-204ENST00000444061 CCL5P13501 91 aa14.88□□□□□ -0.03
SMARCA4-204ENST00000444061 NCAM1P13591 858 aa14.88□□□□□ -0.03
SMARCA4-204ENST00000444061 SERPINB6P35237 376 aa14.88□□□□□ -0.03
SMARCA4-204ENST00000444061 HARS2P49590 506 aaKnown RBP14.88□□□□□ -0.03
SMARCA4-204ENST00000444061 KLK7P49862 253 aa14.88□□□□□ -0.03
SMARCA4-204ENST00000444061 LRRC8DQ7L1W4 858 aa14.88□□□□□ -0.03
SMARCA4-204ENST00000444061 PARD3BQ8TEW8 1205 aa14.88□□□□□ -0.03
SMARCA4-204ENST00000444061 CCT6BQ92526 530 aa14.88□□□□□ -0.03
SMARCA4-204ENST00000444061 TMEM117Q9H0C3 514 aa14.88□□□□□ -0.03
SMARCA4-204ENST00000444061 CHST12Q9NRB3 414 aa14.88□□□□□ -0.03
SMARCA4-204ENST00000444061 TRPM5Q9NZQ8 1165 aa14.88□□□□□ -0.03
SMARCA4-204ENST00000444061 PCDHA2Q9Y5H9 948 aa14.88□□□□□ -0.03
SMARCA4-204ENST00000444061 ADGRG1Q9Y653 693 aa14.88□□□□□ -0.03
SMARCA4-204ENST00000444061 XIRP1Q702N8 1843 aaKnown RBP14.88□□□□□ -0.03
SMARCA4-204ENST00000444061 ZMYM2Q9UBW7 1377 aa14.88□□□□□ -0.03
SMARCA4-204ENST00000444061 FOXN3O00409 490 aaPredicted RBP14.88□□□□□ -0.03
SMARCA4-204ENST00000444061 DARSP14868 501 aaKnown RBP14.88□□□□□ -0.03
SMARCA4-204ENST00000444061 ELF2Q15723 593 aa14.88□□□□□ -0.03
SMARCA4-204ENST00000444061 SPOPLQ6IQ16 392 aa14.88□□□□□ -0.03
SMARCA4-204ENST00000444061 TRIM59Q8IWR1 403 aa14.88□□□□□ -0.03
SMARCA4-204ENST00000444061 C7orf61Q8IZ16 206 aa14.88□□□□□ -0.03
SMARCA4-204ENST00000444061 ZNF784Q8NCA9 323 aaPredicted RBP14.88□□□□□ -0.03
SMARCA4-204ENST00000444061 SLC7A14Q8TBB6 771 aa14.88□□□□□ -0.03
SMARCA4-204ENST00000444061 MMTAG2Q9BU76 263 aaKnown RBP14.88□□□□□ -0.03
SMARCA4-204ENST00000444061 A0A1W2PQJ5 194 aa14.87□□□□□ -0.03
SMARCA4-204ENST00000444061 CKMP06732 381 aa14.87□□□□□ -0.03
SMARCA4-204ENST00000444061 IGFBP4P22692 258 aa14.87□□□□□ -0.03
SMARCA4-204ENST00000444061 BCAT1P54687 386 aa14.87□□□□□ -0.03
SMARCA4-204ENST00000444061 C1orf131Q8NDD1 294 aaKnown RBP14.87□□□□□ -0.03
SMARCA4-204ENST00000444061 MCEEQ96PE7 176 aa14.87□□□□□ -0.03
SMARCA4-204ENST00000444061 CHP1Q99653 195 aa14.87□□□□□ -0.03
SMARCA4-204ENST00000444061 PCDHB5Q9Y5E4 795 aa14.87□□□□□ -0.03
SMARCA4-204ENST00000444061 KPNA7A9QM74 516 aa14.87□□□□□ -0.03
SMARCA4-204ENST00000444061 RAP1GAPP47736 663 aa14.87□□□□□ -0.03
SMARCA4-204ENST00000444061 SEPT6Q14141 434 aa14.87□□□□□ -0.03
SMARCA4-204ENST00000444061 MDH1BQ5I0G3 518 aa14.87□□□□□ -0.03
SMARCA4-204ENST00000444061 PDCD6IPQ8WUM4 868 aaKnown RBP14.87□□□□□ -0.03
SMARCA4-204ENST00000444061 PPM1EQ8WY54 764 aa14.87□□□□□ -0.03
SMARCA4-204ENST00000444061 DNAJC19Q96DA6 116 aa14.87□□□□□ -0.03
SMARCA4-204ENST00000444061 ACO2Q99798 780 aaKnown RBP14.87□□□□□ -0.03
SMARCA4-204ENST00000444061 WNT8AQ9H1J5 351 aa14.87□□□□□ -0.03
SMARCA4-204ENST00000444061 TSPYL2Q9H2G4 693 aaPredicted RBP14.87□□□□□ -0.03
SMARCA4-204ENST00000444061 MAFBQ9Y5Q3 323 aaPredicted RBP14.87□□□□□ -0.03
SMARCA4-204ENST00000444061 CPP00450 1065 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms