RNA–Protein interactions for RNA: ENST00000442625.2

MCF2L-218, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best)

Gene MCF2L, Length 2,710 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-218ENST00000442625 MMP10P09238 476 aa14.93□□□□□ -0.02
MCF2L-218ENST00000442625 QARSP47897 775 aaKnown RBP14.93□□□□□ -0.02
MCF2L-218ENST00000442625 MKRN3Q13064 507 aaKnown RBP14.93□□□□□ -0.02
MCF2L-218ENST00000442625 MASTLQ96GX5 879 aa14.93□□□□□ -0.02
MCF2L-218ENST00000442625 NT5C1BQ96P26 610 aa14.93□□□□□ -0.02
MCF2L-218ENST00000442625 MIPEPQ99797 713 aa14.93□□□□□ -0.02
MCF2L-218ENST00000442625 SH3GL3Q99963 347 aa14.93□□□□□ -0.02
MCF2L-218ENST00000442625 SPATS2LQ9NUQ6 558 aaKnown RBP14.93□□□□□ -0.02
MCF2L-218ENST00000442625 USH1CQ9Y6N9 552 aa14.93□□□□□ -0.02
MCF2L-218ENST00000442625 MAPK13O15264 365 aa14.93□□□□□ -0.02
MCF2L-218ENST00000442625 SORBS3O60504 671 aa14.93□□□□□ -0.02
MCF2L-218ENST00000442625 CNGA1P29973 690 aa14.93□□□□□ -0.02
MCF2L-218ENST00000442625 ACVR2BQ13705 512 aa14.93□□□□□ -0.02
MCF2L-218ENST00000442625 XKR9Q5GH70 373 aa14.93□□□□□ -0.02
MCF2L-218ENST00000442625 DSTYKQ6XUX3 929 aa14.93□□□□□ -0.02
MCF2L-218ENST00000442625 OTOAQ7RTW8 1153 aa14.93□□□□□ -0.02
MCF2L-218ENST00000442625 CHURC1Q8WUH1 139 aa14.93□□□□□ -0.02
MCF2L-218ENST00000442625 SLCO2A1Q92959 643 aa14.93□□□□□ -0.02
MCF2L-218ENST00000442625 MRIQ9BWK5 157 aa14.93□□□□□ -0.02
MCF2L-218ENST00000442625 ZCWPW1Q9H0M4 648 aa14.93□□□□□ -0.02
MCF2L-218ENST00000442625 RAB20Q9NX57 234 aa14.93□□□□□ -0.02
MCF2L-218ENST00000442625 NEU2Q9Y3R4 380 aa14.93□□□□□ -0.02
MCF2L-218ENST00000442625 ANKRD31Q8N7Z5 1873 aa14.93□□□□□ -0.02
MCF2L-218ENST00000442625 ENTPD3O75355 529 aa14.92□□□□□ -0.02
MCF2L-218ENST00000442625 NPM3O75607 178 aaKnown RBP14.92□□□□□ -0.02
MCF2L-218ENST00000442625 EIF2AK2P19525 551 aaKnown RBP14.92□□□□□ -0.02
MCF2L-218ENST00000442625 YARSP54577 528 aaKnown RBP14.92□□□□□ -0.02
MCF2L-218ENST00000442625 DGKZQ13574 1117 aa14.92□□□□□ -0.02
MCF2L-218ENST00000442625 MAPK6Q16659 721 aa14.92□□□□□ -0.02
MCF2L-218ENST00000442625 CLEC16AQ2KHT3 1053 aa14.92□□□□□ -0.02
MCF2L-218ENST00000442625 SV2AQ7L0J3 742 aa14.92□□□□□ -0.02
MCF2L-218ENST00000442625 C12orf56Q8IXR9 622 aa14.92□□□□□ -0.02
MCF2L-218ENST00000442625 FBXL13Q8NEE6 735 aa14.92□□□□□ -0.02
MCF2L-218ENST00000442625 RFWD2Q8NHY2 731 aa14.92□□□□□ -0.02
MCF2L-218ENST00000442625 DTX3LQ8TDB6 740 aa14.92□□□□□ -0.02
MCF2L-218ENST00000442625 LRRC8CQ8TDW0 803 aa14.92□□□□□ -0.02
MCF2L-218ENST00000442625 DENND1AQ8TEH3 1009 aa14.92□□□□□ -0.02
MCF2L-218ENST00000442625 C10orf82Q8WW14 230 aa14.92□□□□□ -0.02
MCF2L-218ENST00000442625 VTI1AQ96AJ9 217 aa14.92□□□□□ -0.02
MCF2L-218ENST00000442625 MAK16Q9BXY0 300 aaKnown RBP14.92□□□□□ -0.02
MCF2L-218ENST00000442625 LRRC42Q9Y546 428 aa14.92□□□□□ -0.02
MCF2L-218ENST00000442625 ATRNL1Q5VV63 1379 aa14.92□□□□□ -0.02
MCF2L-218ENST00000442625 THSD7AQ9UPZ6 1657 aa14.92□□□□□ -0.02
MCF2L-218ENST00000442625 EDF1O60869 148 aaKnown RBP14.92□□□□□ -0.02
MCF2L-218ENST00000442625 CCNG1P51959 295 aa14.92□□□□□ -0.02
MCF2L-218ENST00000442625 MRPS9P82933 396 aaKnown RBP14.92□□□□□ -0.02
MCF2L-218ENST00000442625 TKFCQ3LXA3 575 aa14.92□□□□□ -0.02
MCF2L-218ENST00000442625 RNF220Q5VTB9 566 aa14.92□□□□□ -0.02
MCF2L-218ENST00000442625 TMEM154Q6P9G4 183 aa14.92□□□□□ -0.02
MCF2L-218ENST00000442625 PHC3Q8NDX5 983 aa14.92□□□□□ -0.02
MCF2L-218ENST00000442625 CCDC77Q9BR77 488 aa14.92□□□□□ -0.02
MCF2L-218ENST00000442625 C11orf70Q9BRQ4 267 aa14.92□□□□□ -0.02
MCF2L-218ENST00000442625 DNPEPQ9ULA0 475 aa14.92□□□□□ -0.02
MCF2L-218ENST00000442625 TBX20Q9UMR3 447 aa14.92□□□□□ -0.02
MCF2L-218ENST00000442625 STARD13Q9Y3M8 1113 aa14.92□□□□□ -0.02
MCF2L-218ENST00000442625 ASTN2O75129 1339 aaPredicted RBP14.92□□□□□ -0.02
MCF2L-218ENST00000442625 DENND3A2RUS2 1198 aa14.91□□□□□ -0.02
MCF2L-218ENST00000442625 ATP9AO75110 1047 aa14.91□□□□□ -0.02
MCF2L-218ENST00000442625 PECAM1P16284 738 aaPredicted RBP14.91□□□□□ -0.02
MCF2L-218ENST00000442625 RFC5P40937 340 aa14.91□□□□□ -0.02
MCF2L-218ENST00000442625 SKIV2L2P42285 1042 aaKnown RBP14.91□□□□□ -0.02
MCF2L-218ENST00000442625 MXRA7P84157 204 aa14.91□□□□□ -0.02
MCF2L-218ENST00000442625 MTMR1Q13613 665 aa14.91□□□□□ -0.02
MCF2L-218ENST00000442625 SPOPLQ6IQ16 392 aa14.91□□□□□ -0.02
MCF2L-218ENST00000442625 LVRNQ6Q4G3 990 aa14.91□□□□□ -0.02
MCF2L-218ENST00000442625 MCOLN2Q8IZK6 566 aa14.91□□□□□ -0.02
MCF2L-218ENST00000442625 KIFAP3Q92845 792 aa14.91□□□□□ -0.02
MCF2L-218ENST00000442625 AGO4Q9HCK5 861 aaKnown RBP14.91□□□□□ -0.02
MCF2L-218ENST00000442625 TMEM8AQ9HCN3 771 aa14.91□□□□□ -0.02
MCF2L-218ENST00000442625 SMIM24O75264 130 aa14.91□□□□□ -0.02
MCF2L-218ENST00000442625 LGR5O75473 907 aa14.91□□□□□ -0.02
MCF2L-218ENST00000442625 TCEA3O75764 348 aa14.91□□□□□ -0.02
MCF2L-218ENST00000442625 MYCLP12524 364 aaPredicted RBP14.91□□□□□ -0.02
MCF2L-218ENST00000442625 ATF7P17544 494 aaPredicted RBP14.91□□□□□ -0.02
MCF2L-218ENST00000442625 PIK3CAP42336 1068 aa14.91□□□□□ -0.02
MCF2L-218ENST00000442625 NPTX2P47972 431 aa14.91□□□□□ -0.02
MCF2L-218ENST00000442625 CCDC15Q0P6D6 951 aa14.91□□□□□ -0.02
MCF2L-218ENST00000442625 KLF1Q13351 362 aaPredicted RBP14.91□□□□□ -0.02
MCF2L-218ENST00000442625 ALCAMQ13740 583 aa14.91□□□□□ -0.02
MCF2L-218ENST00000442625 SPARCL1Q14515 664 aa14.91□□□□□ -0.02
MCF2L-218ENST00000442625 STAT4Q14765 748 aa14.91□□□□□ -0.02
MCF2L-218ENST00000442625 PARP6Q2NL67 630 aa14.91□□□□□ -0.02
MCF2L-218ENST00000442625 SLC39A4Q6P5W5 647 aa14.91□□□□□ -0.02
MCF2L-218ENST00000442625 ZBED8Q8IZ13 594 aa14.91□□□□□ -0.02
MCF2L-218ENST00000442625 AGGF1Q8N302 714 aaeCLIP14.91□□□□□ -0.02
MCF2L-218ENST00000442625 BSNDQ8WZ55 320 aa14.91□□□□□ -0.02
MCF2L-218ENST00000442625 PLVAPQ9BX97 442 aa14.91□□□□□ -0.02
MCF2L-218ENST00000442625 OSBPL8Q9BZF1 889 aa14.91□□□□□ -0.02
MCF2L-218ENST00000442625 DLGAP2Q9P1A6 1054 aa14.91□□□□□ -0.02
MCF2L-218ENST00000442625 ZFP69BQ9UJL9 534 aa14.91□□□□□ -0.02
MCF2L-218ENST00000442625 A0A0G2JND7 137 aa14.9□□□□□ -0.02
MCF2L-218ENST00000442625 ADRA1DP25100 572 aa14.9□□□□□ -0.02
MCF2L-218ENST00000442625 GPC3P51654 580 aa14.9□□□□□ -0.02
MCF2L-218ENST00000442625 HHATQ5VTY9 493 aa14.9□□□□□ -0.02
MCF2L-218ENST00000442625 NLRP9Q7RTR0 991 aa14.9□□□□□ -0.02
MCF2L-218ENST00000442625 TMEM161BQ8NDZ6 487 aa14.9□□□□□ -0.02
MCF2L-218ENST00000442625 ASAP3Q8TDY4 903 aa14.9□□□□□ -0.02
MCF2L-218ENST00000442625 GRK7Q8WTQ7 553 aa14.9□□□□□ -0.02
MCF2L-218ENST00000442625 KANSL3Q9P2N6 904 aa14.9□□□□□ -0.02
MCF2L-218ENST00000442625 SAE1Q9UBE0 346 aaPredicted RBP14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms