RNA–Protein interactions for RNA: ENST00000442461.6

LIN54-202, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best) BASIC

Gene LIN54, Length 4,254 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-202ENST00000442461 TTI2Q6NXR4 508 aa10.79□□□□□ -0.68
LIN54-202ENST00000442461 AAGABQ6PD74 315 aa10.79□□□□□ -0.68
LIN54-202ENST00000442461 C4orf50Q6ZRC1 276 aa10.79□□□□□ -0.68
LIN54-202ENST00000442461 ARPINQ7Z6K5 226 aa10.79□□□□□ -0.68
LIN54-202ENST00000442461 KBTBD2Q8IY47 623 aa10.79□□□□□ -0.68
LIN54-202ENST00000442461 PACSIN1Q9BY11 444 aa10.79□□□□□ -0.68
LIN54-202ENST00000442461 ZHX2Q9Y6X8 837 aa10.79□□□□□ -0.68
LIN54-202ENST00000442461 MEIS1O00470 390 aa10.79□□□□□ -0.68
LIN54-202ENST00000442461 PDE8BO95263 885 aa10.79□□□□□ -0.68
LIN54-202ENST00000442461 ALDH1A3P47895 512 aa10.79□□□□□ -0.68
LIN54-202ENST00000442461 TUFMP49411 452 aaKnown RBP10.79□□□□□ -0.68
LIN54-202ENST00000442461 LIG4P49917 911 aa10.79□□□□□ -0.68
LIN54-202ENST00000442461 RTP1P59025 263 aa10.79□□□□□ -0.68
LIN54-202ENST00000442461 SP4Q02446 784 aa10.79□□□□□ -0.68
LIN54-202ENST00000442461 NEDD8Q15843 81 aa10.79□□□□□ -0.68
LIN54-202ENST00000442461 DDB1Q16531 1140 aa10.79□□□□□ -0.68
LIN54-202ENST00000442461 C6orf183Q5T699 404 aa10.79□□□□□ -0.68
LIN54-202ENST00000442461 TUBA3EQ6PEY2 450 aa10.79□□□□□ -0.68
LIN54-202ENST00000442461 RIPOR1Q6ZS17 1223 aa10.79□□□□□ -0.68
LIN54-202ENST00000442461 PRUNE1Q86TP1 453 aa10.79□□□□□ -0.68
LIN54-202ENST00000442461 SH3TC2Q8TF17 1288 aa10.79□□□□□ -0.68
LIN54-202ENST00000442461 RNF34Q969K3 372 aa10.79□□□□□ -0.68
LIN54-202ENST00000442461 ZSWIM1Q9BR11 485 aa10.79□□□□□ -0.68
LIN54-202ENST00000442461 C11orf70Q9BRQ4 267 aa10.79□□□□□ -0.68
LIN54-202ENST00000442461 DENND2DQ9H6A0 471 aaPredicted RBP10.79□□□□□ -0.68
LIN54-202ENST00000442461 IPPQ9Y573 584 aa10.79□□□□□ -0.68
LIN54-202ENST00000442461 NEDD4P46934 1319 aa10.79□□□□□ -0.68
LIN54-202ENST00000442461 C5orf60A6NFR6 353 aa10.79□□□□□ -0.68
LIN54-202ENST00000442461 POTEMA6NI47 508 aa10.79□□□□□ -0.68
LIN54-202ENST00000442461 CENPXA8MT69 81 aa10.79□□□□□ -0.68
LIN54-202ENST00000442461 SLC9A1P19634 815 aa10.79□□□□□ -0.68
LIN54-202ENST00000442461 STX5Q13190 355 aa10.79□□□□□ -0.68
LIN54-202ENST00000442461 SF3B3Q15393 1217 aaKnown RBP10.79□□□□□ -0.68
LIN54-202ENST00000442461 ZNF804AQ7Z570 1209 aa10.79□□□□□ -0.68
LIN54-202ENST00000442461 LUZP2Q86TE4 346 aa10.79□□□□□ -0.68
LIN54-202ENST00000442461 NLRP10Q86W26 655 aa10.79□□□□□ -0.68
LIN54-202ENST00000442461 NCAPG2Q86XI2 1143 aa10.79□□□□□ -0.68
LIN54-202ENST00000442461 MAP3K14Q99558 947 aa10.79□□□□□ -0.68
LIN54-202ENST00000442461 GCOM2Q9BZD3 368 aaPredicted RBP10.79□□□□□ -0.68
LIN54-202ENST00000442461 PICK1Q9NRD5 415 aa10.79□□□□□ -0.68
LIN54-202ENST00000442461 TDRKHQ9Y2W6 561 aaKnown RBP10.79□□□□□ -0.68
LIN54-202ENST00000442461 LAMC3Q9Y6N6 1575 aa10.79□□□□□ -0.68
LIN54-202ENST00000442461 TRIM49D1C9J1S8 452 aa10.78□□□□□ -0.68
LIN54-202ENST00000442461 hCG_1984214I3L0E3 225 aa10.78□□□□□ -0.68
LIN54-202ENST00000442461 AREL1O15033 823 aa10.78□□□□□ -0.68
LIN54-202ENST00000442461 LZTS3O60299 673 aaPredicted RBP10.78□□□□□ -0.68
LIN54-202ENST00000442461 CDH2P19022 906 aaPredicted RBP10.78□□□□□ -0.68
LIN54-202ENST00000442461 FOLH1Q04609 750 aa10.78□□□□□ -0.68
LIN54-202ENST00000442461 KRT72Q14CN4 511 aa10.78□□□□□ -0.68
LIN54-202ENST00000442461 FITM2Q8N6M3 262 aa10.78□□□□□ -0.68
LIN54-202ENST00000442461 ZNF713Q8N859 430 aaPredicted RBP10.78□□□□□ -0.68
LIN54-202ENST00000442461 ARHGEF1Q92888 912 aaKnown RBP10.78□□□□□ -0.68
LIN54-202ENST00000442461 ARHGEF3Q9NR81 526 aa10.78□□□□□ -0.68
LIN54-202ENST00000442461 NIP7Q9Y221 180 aaKnown RBP eCLIP10.78□□□□□ -0.68
LIN54-202ENST00000442461 KLHL20Q9Y2M5 609 aa10.78□□□□□ -0.68
LIN54-202ENST00000442461 HMGXB3Q12766 1538 aa10.78□□□□□ -0.68
LIN54-202ENST00000442461 ANGPT2O15123 496 aa10.78□□□□□ -0.68
LIN54-202ENST00000442461 RAD51BO15315 384 aa10.78□□□□□ -0.68
LIN54-202ENST00000442461 BIRC5O15392 142 aa10.78□□□□□ -0.68
LIN54-202ENST00000442461 TLR3O15455 904 aaKnown RBP10.78□□□□□ -0.68
LIN54-202ENST00000442461 CLOCKO15516 846 aa10.78□□□□□ -0.68
LIN54-202ENST00000442461 SRP72O76094 671 aaKnown RBP10.78□□□□□ -0.68
LIN54-202ENST00000442461 RHOBTB1O94844 696 aa10.78□□□□□ -0.68
LIN54-202ENST00000442461 LINGO3P0C6S8 592 aa10.78□□□□□ -0.68
LIN54-202ENST00000442461 AKR1B1P15121 316 aa10.78□□□□□ -0.68
LIN54-202ENST00000442461 GRK2P25098 689 aa10.78□□□□□ -0.68
LIN54-202ENST00000442461 ORC2Q13416 577 aaPredicted RBP10.78□□□□□ -0.68
LIN54-202ENST00000442461 BFSP2Q13515 415 aa10.78□□□□□ -0.68
LIN54-202ENST00000442461 ARMCX4Q5H9R4 360 aa10.78□□□□□ -0.68
LIN54-202ENST00000442461 TCHHL1Q5QJ38 904 aaPredicted RBP10.78□□□□□ -0.68
LIN54-202ENST00000442461 IFNEQ86WN2 208 aa10.78□□□□□ -0.68
LIN54-202ENST00000442461 ARHGEF19Q8IW93 802 aa10.78□□□□□ -0.68
LIN54-202ENST00000442461 CCNYQ8ND76 341 aa10.78□□□□□ -0.68
LIN54-202ENST00000442461 UCMAQ8WVF2 138 aa10.78□□□□□ -0.68
LIN54-202ENST00000442461 VPS39Q96JC1 886 aa10.78□□□□□ -0.68
LIN54-202ENST00000442461 ETNK2Q9NVF9 386 aa10.78□□□□□ -0.68
LIN54-202ENST00000442461 SLC12A4Q9UP95 1085 aa10.78□□□□□ -0.68
LIN54-202ENST00000442461 XDHP47989 1333 aa10.78□□□□□ -0.68
LIN54-202ENST00000442461 TRIM24O15164 1050 aa10.78□□□□□ -0.68
LIN54-202ENST00000442461 TSC22D2O75157 780 aa10.78□□□□□ -0.68
LIN54-202ENST00000442461 MED26O95402 600 aa10.78□□□□□ -0.68
LIN54-202ENST00000442461 CFBP00751 764 aa10.78□□□□□ -0.68
LIN54-202ENST00000442461 FOSP01100 380 aaPredicted RBP10.78□□□□□ -0.68
LIN54-202ENST00000442461 PENKP01210 267 aaPredicted RBP10.78□□□□□ -0.68
LIN54-202ENST00000442461 PSMA2P25787 234 aa10.78□□□□□ -0.68
LIN54-202ENST00000442461 MAPK6Q16659 721 aa10.78□□□□□ -0.68
LIN54-202ENST00000442461 ARMC4Q5T2S8 1044 aa10.78□□□□□ -0.68
LIN54-202ENST00000442461 FAM102BQ5T8I3 360 aa10.78□□□□□ -0.68
LIN54-202ENST00000442461 ELMSAN1Q6PJG2 1045 aa10.78□□□□□ -0.68
LIN54-202ENST00000442461 CCDC81Q6ZN84 652 aa10.78□□□□□ -0.68
LIN54-202ENST00000442461 PPP1R36Q96LQ0 422 aa10.78□□□□□ -0.68
LIN54-202ENST00000442461 GPATCH1Q9BRR8 931 aaKnown RBP10.78□□□□□ -0.68
LIN54-202ENST00000442461 POLR1AO95602 1720 aaPredicted RBP10.78□□□□□ -0.68
LIN54-202ENST00000442461 A0A0A6YYK5 440 aaPredicted RBP10.78□□□□□ -0.68
LIN54-202ENST00000442461 PRPSAP2O60256 369 aa10.78□□□□□ -0.68
LIN54-202ENST00000442461 ATP5BP06576 529 aaKnown RBP10.78□□□□□ -0.68
LIN54-202ENST00000442461 P4HA1P13674 534 aa10.78□□□□□ -0.68
LIN54-202ENST00000442461 BGNP21810 368 aa10.78□□□□□ -0.68
LIN54-202ENST00000442461 GCLMP48507 274 aa10.78□□□□□ -0.68
LIN54-202ENST00000442461 UBE3AQ05086 875 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms