RNA–Protein interactions for RNA: ENST00000441443.6

SHOX2-203, Transcript of short stature homeobox 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHOX2, Length 3,038 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-203ENST00000441443 RANBP1P43487 201 aa21.45■■□□□ 1.02
SHOX2-203ENST00000441443 TBC1D10BQ4KMP7 808 aaPredicted RBP21.45■■□□□ 1.02
SHOX2-203ENST00000441443 RINLQ6ZS11 566 aa21.45■■□□□ 1.02
SHOX2-203ENST00000441443 STXBP4Q6ZWJ1 553 aa21.45■■□□□ 1.02
SHOX2-203ENST00000441443 FBXO11Q86XK2 927 aa21.45■■□□□ 1.02
SHOX2-203ENST00000441443 GATA6Q92908 595 aa21.45■■□□□ 1.02
SHOX2-203ENST00000441443 STMN2Q93045 179 aa21.45■■□□□ 1.02
SHOX2-203ENST00000441443 AKT1S1Q96B36 256 aa21.45■■□□□ 1.02
SHOX2-203ENST00000441443 MAGEA13PA6NCF6 341 aa21.44■■□□□ 1.02
SHOX2-203ENST00000441443 HAUS5O94927 633 aa21.44■■□□□ 1.02
SHOX2-203ENST00000441443 CETN2P41208 172 aa21.44■■□□□ 1.02
SHOX2-203ENST00000441443 NEK3P51956 506 aa21.44■■□□□ 1.02
SHOX2-203ENST00000441443 NR1H3Q13133 447 aa21.44■■□□□ 1.02
SHOX2-203ENST00000441443 PPFIBP2Q8ND30 876 aa21.44■■□□□ 1.02
SHOX2-203ENST00000441443 DHX38Q92620 1227 aaKnown RBP21.44■■□□□ 1.02
SHOX2-203ENST00000441443 RAD17O75943 681 aa21.44■■□□□ 1.02
SHOX2-203ENST00000441443 RXRBP28702 533 aa21.44■■□□□ 1.02
SHOX2-203ENST00000441443 AMNQ9BXJ7 453 aa21.44■■□□□ 1.02
SHOX2-203ENST00000441443 C2orf71A6NGG8 1288 aa21.43■■□□□ 1.02
SHOX2-203ENST00000441443 TYROBPO43914 113 aa21.43■■□□□ 1.02
SHOX2-203ENST00000441443 GSTT1P30711 240 aa21.43■■□□□ 1.02
SHOX2-203ENST00000441443 SREBF1P36956 1147 aa21.43■■□□□ 1.02
SHOX2-203ENST00000441443 THOC5Q13769 683 aaKnown RBP21.43■■□□□ 1.02
SHOX2-203ENST00000441443 CCDC174Q6PII3 467 aa21.43■■□□□ 1.02
SHOX2-203ENST00000441443 ZCCHC9Q8N567 271 aaKnown RBP21.43■■□□□ 1.02
SHOX2-203ENST00000441443 KRT82Q9NSB4 513 aa21.43■■□□□ 1.02
SHOX2-203ENST00000441443 GOLGA8IPA6NC78 632 aa21.43■■□□□ 1.02
SHOX2-203ENST00000441443 GOLGA8JA6NMD2 632 aa21.43■■□□□ 1.02
SHOX2-203ENST00000441443 GOLGA8RI6L899 631 aa21.43■■□□□ 1.02
SHOX2-203ENST00000441443 K7ENM7 598 aa21.43■■□□□ 1.02
SHOX2-203ENST00000441443 MAP3K7O43318 606 aa21.43■■□□□ 1.02
SHOX2-203ENST00000441443 CFBP00751 764 aa21.43■■□□□ 1.02
SHOX2-203ENST00000441443 TROVE2P10155 538 aaKnown RBP eCLIP21.43■■□□□ 1.02
SHOX2-203ENST00000441443 MAIP1Q8WWC4 291 aa21.43■■□□□ 1.02
SHOX2-203ENST00000441443 DDX27Q96GQ7 796 aaKnown RBP21.43■■□□□ 1.02
SHOX2-203ENST00000441443 KLF6Q99612 283 aaPredicted RBP21.43■■□□□ 1.02
SHOX2-203ENST00000441443 UBE2OQ9C0C9 1292 aaKnown RBP21.43■■□□□ 1.02
SHOX2-203ENST00000441443 FHDC1Q9C0D6 1143 aaPredicted RBP21.43■■□□□ 1.02
SHOX2-203ENST00000441443 TMEM117Q9H0C3 514 aa21.43■■□□□ 1.02
SHOX2-203ENST00000441443 ANKFY1Q9P2R3 1169 aa21.43■■□□□ 1.02
SHOX2-203ENST00000441443 BANF1O75531 89 aa21.42■■□□□ 1.02
SHOX2-203ENST00000441443 ABHD2P08910 425 aa21.42■■□□□ 1.02
SHOX2-203ENST00000441443 ETS1P14921 441 aa21.42■■□□□ 1.02
SHOX2-203ENST00000441443 SERPINB3P29508 390 aa21.42■■□□□ 1.02
SHOX2-203ENST00000441443 MXI1P50539 228 aa21.42■■□□□ 1.02
SHOX2-203ENST00000441443 RASIP1Q5U651 963 aa21.42■■□□□ 1.02
SHOX2-203ENST00000441443 ANKS1BQ7Z6G8 1248 aa21.42■■□□□ 1.02
SHOX2-203ENST00000441443 SEMA4DQ92854 862 aa21.42■■□□□ 1.02
SHOX2-203ENST00000441443 PTCD3Q96EY7 689 aaKnown RBP21.42■■□□□ 1.02
SHOX2-203ENST00000441443 SYNCQ9H7C4 482 aa21.42■■□□□ 1.02
SHOX2-203ENST00000441443 ZBED4O75132 1171 aa21.42■■□□□ 1.02
SHOX2-203ENST00000441443 CPA2P48052 419 aa21.42■■□□□ 1.02
SHOX2-203ENST00000441443 ZBTB16Q05516 673 aa21.42■■□□□ 1.02
SHOX2-203ENST00000441443 AP1B1Q10567 949 aa21.42■■□□□ 1.02
SHOX2-203ENST00000441443 TMEM179Q6ZVK1 233 aa21.42■■□□□ 1.02
SHOX2-203ENST00000441443 OTOP1Q7RTM1 612 aa21.42■■□□□ 1.02
SHOX2-203ENST00000441443 RELL1Q8IUW5 271 aa21.42■■□□□ 1.02
SHOX2-203ENST00000441443 PDCD7Q8N8D1 485 aaKnown RBP21.42■■□□□ 1.02
SHOX2-203ENST00000441443 NSL1Q96IY1 281 aa21.42■■□□□ 1.02
SHOX2-203ENST00000441443 RBM41Q96IZ5 413 aaKnown RBP21.42■■□□□ 1.02
SHOX2-203ENST00000441443 TIPINQ9BVW5 301 aa21.42■■□□□ 1.02
SHOX2-203ENST00000441443 NYAP2Q9P242 653 aa21.42■■□□□ 1.02
SHOX2-203ENST00000441443 MYH11P35749 1972 aa21.42■■□□□ 1.02
SHOX2-203ENST00000441443 FDX1P10109 184 aa21.42■■□□□ 1.02
SHOX2-203ENST00000441443 SSR1P43307 286 aaKnown RBP21.42■■□□□ 1.02
SHOX2-203ENST00000441443 NOP14P78316 857 aaKnown RBP21.42■■□□□ 1.02
SHOX2-203ENST00000441443 SEPT7Q16181 437 aaKnown RBP21.42■■□□□ 1.02
SHOX2-203ENST00000441443 WDR72Q3MJ13 1102 aa21.42■■□□□ 1.02
SHOX2-203ENST00000441443 ACAD10Q6JQN1 1059 aa21.42■■□□□ 1.02
SHOX2-203ENST00000441443 ZBED8Q8IZ13 594 aa21.42■■□□□ 1.02
SHOX2-203ENST00000441443 BBOF1Q8ND07 529 aa21.42■■□□□ 1.02
SHOX2-203ENST00000441443 OCEL1Q9H607 264 aa21.42■■□□□ 1.02
SHOX2-203ENST00000441443 TAS2R1Q9NYW7 299 aa21.42■■□□□ 1.02
SHOX2-203ENST00000441443 ANKRD31Q8N7Z5 1873 aa21.42■■□□□ 1.02
SHOX2-203ENST00000441443 PIK3CDO00329 1044 aa21.41■■□□□ 1.02
SHOX2-203ENST00000441443 CD58P19256 250 aa21.41■■□□□ 1.02
SHOX2-203ENST00000441443 AMPD1P23109 780 aa21.41■■□□□ 1.02
SHOX2-203ENST00000441443 TRMT1LQ7Z2T5 733 aaKnown RBP21.41■■□□□ 1.02
SHOX2-203ENST00000441443 LRRC6Q86X45 466 aa21.41■■□□□ 1.02
SHOX2-203ENST00000441443 ACER1Q8TDN7 264 aa21.41■■□□□ 1.02
SHOX2-203ENST00000441443 DCAF4Q8WV16 495 aa21.41■■□□□ 1.02
SHOX2-203ENST00000441443 ZNF184Q99676 751 aaPredicted RBP21.41■■□□□ 1.02
SHOX2-203ENST00000441443 KLHL11Q9NVR0 708 aa21.41■■□□□ 1.02
SHOX2-203ENST00000441443 STX18Q9P2W9 335 aaKnown RBP21.41■■□□□ 1.02
SHOX2-203ENST00000441443 SEL1LQ9UBV2 794 aa21.41■■□□□ 1.02
SHOX2-203ENST00000441443 ZBTB12Q9Y330 459 aaPredicted RBP21.41■■□□□ 1.02
SHOX2-203ENST00000441443 STK24Q9Y6E0 443 aa21.41■■□□□ 1.02
SHOX2-203ENST00000441443 SMCHD1A6NHR9 2005 aa21.41■■□□□ 1.02
SHOX2-203ENST00000441443 ZWINTO95229 277 aa21.41■■□□□ 1.02
SHOX2-203ENST00000441443 KLRC2P26717 231 aa21.41■■□□□ 1.02
SHOX2-203ENST00000441443 KLF1Q13351 362 aaPredicted RBP21.41■■□□□ 1.02
SHOX2-203ENST00000441443 ZRSR2Q15696 482 aaKnown RBP21.41■■□□□ 1.02
SHOX2-203ENST00000441443 TTC7BQ86TV6 843 aa21.41■■□□□ 1.02
SHOX2-203ENST00000441443 SLC9A9Q8IVB4 645 aa21.41■■□□□ 1.02
SHOX2-203ENST00000441443 BICD1Q96G01 975 aa21.41■■□□□ 1.02
SHOX2-203ENST00000441443 ADSSP30520 456 aa21.4■■□□□ 1.02
SHOX2-203ENST00000441443 EFTUD2Q15029 972 aaKnown RBP eCLIP21.4■■□□□ 1.02
SHOX2-203ENST00000441443 CCNG2Q16589 344 aa21.4■■□□□ 1.02
SHOX2-203ENST00000441443 KAZNQ674X7 775 aa21.4■■□□□ 1.02
SHOX2-203ENST00000441443 ANKMY2Q8IV38 441 aa21.4■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms