RNA–Protein interactions for RNA: ENST00000441438.2

SYNE2-206, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 3,084 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-206ENST00000441438 CCDC62Q6P9F0 684 aa11.18□□□□□ -0.62
SYNE2-206ENST00000441438 SAMD7Q7Z3H4 446 aa11.18□□□□□ -0.62
SYNE2-206ENST00000441438 CHD1LQ86WJ1 897 aa11.18□□□□□ -0.62
SYNE2-206ENST00000441438 LINS1Q8NG48 757 aa11.18□□□□□ -0.62
SYNE2-206ENST00000441438 PTP4A1Q93096 173 aa11.18□□□□□ -0.62
SYNE2-206ENST00000441438 SNF8Q96H20 258 aa11.18□□□□□ -0.62
SYNE2-206ENST00000441438 EYA3Q99504 573 aa11.18□□□□□ -0.62
SYNE2-206ENST00000441438 NTN4Q9HB63 628 aa11.18□□□□□ -0.62
SYNE2-206ENST00000441438 PCOLCE2Q9UKZ9 415 aa11.18□□□□□ -0.62
SYNE2-206ENST00000441438 GJB6O95452 261 aa11.17□□□□□ -0.62
SYNE2-206ENST00000441438 CHGBP05060 677 aa11.17□□□□□ -0.62
SYNE2-206ENST00000441438 COASYQ13057 564 aa11.17□□□□□ -0.62
SYNE2-206ENST00000441438 KCNT1Q5JUK3 1230 aa11.17□□□□□ -0.62
SYNE2-206ENST00000441438 ADAD1Q96M93 576 aaKnown RBP11.17□□□□□ -0.62
SYNE2-206ENST00000441438 SMC6Q96SB8 1091 aa11.17□□□□□ -0.62
SYNE2-206ENST00000441438 RASAL2Q9UJF2 1139 aa11.17□□□□□ -0.62
SYNE2-206ENST00000441438 TELO2Q9Y4R8 837 aa11.17□□□□□ -0.62
SYNE2-206ENST00000441438 A0A087X0M5 115 aa11.17□□□□□ -0.62
SYNE2-206ENST00000441438 A0A1B0GX30 115 aa11.17□□□□□ -0.62
SYNE2-206ENST00000441438 NCF1BA6NI72 391 aaPredicted RBP11.17□□□□□ -0.62
SYNE2-206ENST00000441438 NCF1CA8MVU1 366 aaPredicted RBP11.17□□□□□ -0.62
SYNE2-206ENST00000441438 OPLAHO14841 1288 aa11.17□□□□□ -0.62
SYNE2-206ENST00000441438 CD2BP2O95400 341 aaKnown RBP11.17□□□□□ -0.62
SYNE2-206ENST00000441438 RETP07949 1114 aa11.17□□□□□ -0.62
SYNE2-206ENST00000441438 DHRS4L1P0CG22 281 aa11.17□□□□□ -0.62
SYNE2-206ENST00000441438 CASTP20810 708 aaKnown RBP11.17□□□□□ -0.62
SYNE2-206ENST00000441438 CLNS1AP54105 237 aaKnown RBP11.17□□□□□ -0.62
SYNE2-206ENST00000441438 NIPAL4Q0D2K0 466 aa11.17□□□□□ -0.62
SYNE2-206ENST00000441438 ITGA7Q13683 1181 aa11.17□□□□□ -0.62
SYNE2-206ENST00000441438 COL9A2Q14055 689 aaPredicted RBP11.17□□□□□ -0.62
SYNE2-206ENST00000441438 CFAP100Q494V2 611 aa11.17□□□□□ -0.62
SYNE2-206ENST00000441438 PDPK2PQ6A1A2 396 aa11.17□□□□□ -0.62
SYNE2-206ENST00000441438 LMBR1LQ6UX01 489 aa11.17□□□□□ -0.62
SYNE2-206ENST00000441438 KIAA0319LQ8IZA0 1049 aa11.17□□□□□ -0.62
SYNE2-206ENST00000441438 MYCBPAPQ8TBZ2 947 aa11.17□□□□□ -0.62
SYNE2-206ENST00000441438 FAM129AQ9BZQ8 928 aa11.17□□□□□ -0.62
SYNE2-206ENST00000441438 ACTR3BQ9P1U1 418 aa11.17□□□□□ -0.62
SYNE2-206ENST00000441438 VAV3Q9UKW4 847 aa11.17□□□□□ -0.62
SYNE2-206ENST00000441438 SATB2Q9UPW6 733 aa11.17□□□□□ -0.62
SYNE2-206ENST00000441438 MAGEB16A2A368 324 aa11.17□□□□□ -0.62
SYNE2-206ENST00000441438 TMEM247A6NEH6 219 aa11.17□□□□□ -0.62
SYNE2-206ENST00000441438 E7EVH7 732 aa11.17□□□□□ -0.62
SYNE2-206ENST00000441438 KLHL2O95198 593 aa11.17□□□□□ -0.62
SYNE2-206ENST00000441438 KRT14P02533 472 aa11.17□□□□□ -0.62
SYNE2-206ENST00000441438 URODP06132 367 aa11.17□□□□□ -0.62
SYNE2-206ENST00000441438 PSAPP07602 524 aa11.17□□□□□ -0.62
SYNE2-206ENST00000441438 EIF1AXP47813 144 aaKnown RBP11.17□□□□□ -0.62
SYNE2-206ENST00000441438 SLC8A3P57103 927 aa11.17□□□□□ -0.62
SYNE2-206ENST00000441438 TAF12Q16514 161 aa11.17□□□□□ -0.62
SYNE2-206ENST00000441438 C1orf141Q5JVX7 400 aa11.17□□□□□ -0.62
SYNE2-206ENST00000441438 B3GNT9Q6UX72 402 aa11.17□□□□□ -0.62
SYNE2-206ENST00000441438 SULF1Q8IWU6 871 aa11.17□□□□□ -0.62
SYNE2-206ENST00000441438 C8orf58Q8NAV2 365 aa11.17□□□□□ -0.62
SYNE2-206ENST00000441438 ZNF507Q8TCN5 953 aa11.17□□□□□ -0.62
SYNE2-206ENST00000441438 HDAC11Q96DB2 347 aa11.17□□□□□ -0.62
SYNE2-206ENST00000441438 HNRNPABQ99729 332 aaKnown RBP11.17□□□□□ -0.62
SYNE2-206ENST00000441438 OR10A4Q9H209 315 aa11.17□□□□□ -0.62
SYNE2-206ENST00000441438 RHBGQ9H310 441 aa11.17□□□□□ -0.62
SYNE2-206ENST00000441438 VPS28Q9UK41 221 aa11.17□□□□□ -0.62
SYNE2-206ENST00000441438 FLT4P35916 1363 aa11.17□□□□□ -0.62
SYNE2-206ENST00000441438 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.16□□□□□ -0.62
SYNE2-206ENST00000441438 ZC3H11AO75152 810 aaKnown RBP eCLIP11.16□□□□□ -0.62
SYNE2-206ENST00000441438 SSTP61278 116 aa11.16□□□□□ -0.62
SYNE2-206ENST00000441438 OLFML2BQ68BL8 750 aa11.16□□□□□ -0.62
SYNE2-206ENST00000441438 IYDQ6PHW0 289 aa11.16□□□□□ -0.62
SYNE2-206ENST00000441438 DPP9Q86TI2 863 aa11.16□□□□□ -0.62
SYNE2-206ENST00000441438 ZDHHC17Q8IUH5 632 aa11.16□□□□□ -0.62
SYNE2-206ENST00000441438 PALM2Q8IXS6 379 aa11.16□□□□□ -0.62
SYNE2-206ENST00000441438 SEPT12Q8IYM1 358 aa11.16□□□□□ -0.62
SYNE2-206ENST00000441438 ZNF321PQ8N8H1 164 aa11.16□□□□□ -0.62
SYNE2-206ENST00000441438 OR8K3Q8NH51 312 aa11.16□□□□□ -0.62
SYNE2-206ENST00000441438 ZSCAN18Q8TBC5 510 aaPredicted RBP11.16□□□□□ -0.62
SYNE2-206ENST00000441438 CACTINQ8WUQ7 758 aaKnown RBP11.16□□□□□ -0.62
SYNE2-206ENST00000441438 PEX13Q92968 403 aa11.16□□□□□ -0.62
SYNE2-206ENST00000441438 GAS2L1Q99501 681 aaPredicted RBP11.16□□□□□ -0.62
SYNE2-206ENST00000441438 OSBPL7Q9BZF2 842 aa11.16□□□□□ -0.62
SYNE2-206ENST00000441438 DENND2DQ9H6A0 471 aaPredicted RBP11.16□□□□□ -0.62
SYNE2-206ENST00000441438 MBIPQ9NS73 344 aa11.16□□□□□ -0.62
SYNE2-206ENST00000441438 FAM198AQ9UFP1 575 aa11.16□□□□□ -0.62
SYNE2-206ENST00000441438 PCDHGB4Q9UN71 923 aa11.16□□□□□ -0.62
SYNE2-206ENST00000441438 A0A1W2PPL8 197 aa11.16□□□□□ -0.62
SYNE2-206ENST00000441438 ECDO95905 644 aaPredicted RBP11.16□□□□□ -0.62
SYNE2-206ENST00000441438 HOXB1P14653 301 aaPredicted RBP11.16□□□□□ -0.62
SYNE2-206ENST00000441438 TRIM23P36406 574 aa11.16□□□□□ -0.62
SYNE2-206ENST00000441438 HSPA14Q0VDF9 509 aa11.16□□□□□ -0.62
SYNE2-206ENST00000441438 EFR3AQ14156 821 aa11.16□□□□□ -0.62
SYNE2-206ENST00000441438 ANO4Q32M45 955 aa11.16□□□□□ -0.62
SYNE2-206ENST00000441438 TXNDC11Q6PKC3 985 aa11.16□□□□□ -0.62
SYNE2-206ENST00000441438 GALNT12Q8IXK2 581 aa11.16□□□□□ -0.62
SYNE2-206ENST00000441438 ZSWIM2Q8NEG5 633 aa11.16□□□□□ -0.62
SYNE2-206ENST00000441438 HSPH1Q92598 858 aa11.16□□□□□ -0.62
SYNE2-206ENST00000441438 ZUFSPQ96AP4 578 aa11.16□□□□□ -0.62
SYNE2-206ENST00000441438 OTUD5Q96G74 571 aa11.16□□□□□ -0.62
SYNE2-206ENST00000441438 COQ7Q99807 217 aa11.16□□□□□ -0.62
SYNE2-206ENST00000441438 STN1Q9H668 368 aaKnown RBP11.16□□□□□ -0.62
SYNE2-206ENST00000441438 BTG4Q9NY30 223 aa11.16□□□□□ -0.62
SYNE2-206ENST00000441438 VPS18Q9P253 973 aa11.16□□□□□ -0.62
SYNE2-206ENST00000441438 APOBEC2Q9Y235 224 aaKnown RBP11.16□□□□□ -0.62
SYNE2-206ENST00000441438 POLHQ9Y253 713 aa11.16□□□□□ -0.62
SYNE2-206ENST00000441438 CASZ1Q86V15 1759 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms