RNA–Protein interactions for RNA: ENST00000440118.1

SHROOM1-204, Transcript of shroom family member 1, humanhuman

TSL 2

Gene SHROOM1, Length 1,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-204ENST00000440118 PCIF1Q9H4Z3 704 aa21.46■■□□□ 1.03
SHROOM1-204ENST00000440118 ASAH2Q9NR71 780 aa21.46■■□□□ 1.03
SHROOM1-204ENST00000440118 WNT16Q9UBV4 365 aa21.46■■□□□ 1.03
SHROOM1-204ENST00000440118 PIRO00625 290 aa21.45■■□□□ 1.02
SHROOM1-204ENST00000440118 ZNF197O14709 1029 aa21.45■■□□□ 1.02
SHROOM1-204ENST00000440118 CLCN5P51795 746 aa21.45■■□□□ 1.02
SHROOM1-204ENST00000440118 SLC5A9Q2M3M2 681 aa21.45■■□□□ 1.02
SHROOM1-204ENST00000440118 CRELD2Q6UXH1 353 aaPredicted RBP21.45■■□□□ 1.02
SHROOM1-204ENST00000440118 CEP57L1Q8IYX8 460 aa21.45■■□□□ 1.02
SHROOM1-204ENST00000440118 TMEM105Q8N8V8 129 aa21.45■■□□□ 1.02
SHROOM1-204ENST00000440118 GPR152Q8TDT2 470 aa21.45■■□□□ 1.02
SHROOM1-204ENST00000440118 HPS3Q969F9 1004 aa21.45■■□□□ 1.02
SHROOM1-204ENST00000440118 MCRS1Q96EZ8 462 aa21.45■■□□□ 1.02
SHROOM1-204ENST00000440118 ARHGEF3Q9NR81 526 aa21.45■■□□□ 1.02
SHROOM1-204ENST00000440118 PCDHA7Q9UN72 937 aa21.45■■□□□ 1.02
SHROOM1-204ENST00000440118 YIPF1Q9Y548 306 aa21.45■■□□□ 1.02
SHROOM1-204ENST00000440118 ANO9A1A5B4 782 aa21.44■■□□□ 1.02
SHROOM1-204ENST00000440118 CYB561D2O14569 222 aa21.44■■□□□ 1.02
SHROOM1-204ENST00000440118 SPTLC1O15269 473 aa21.44■■□□□ 1.02
SHROOM1-204ENST00000440118 EXTL3O43909 919 aa21.44■■□□□ 1.02
SHROOM1-204ENST00000440118 MYL4P12829 197 aa21.44■■□□□ 1.02
SHROOM1-204ENST00000440118 CEBPBP17676 345 aa21.44■■□□□ 1.02
SHROOM1-204ENST00000440118 PNPLA4P41247 253 aa21.44■■□□□ 1.02
SHROOM1-204ENST00000440118 ALDH1A3P47895 512 aa21.44■■□□□ 1.02
SHROOM1-204ENST00000440118 NUBP1P53384 320 aa21.44■■□□□ 1.02
SHROOM1-204ENST00000440118 MYBPC2Q14324 1141 aa21.44■■□□□ 1.02
SHROOM1-204ENST00000440118 FAM26FQ5R3K3 315 aa21.44■■□□□ 1.02
SHROOM1-204ENST00000440118 THEM5Q8N1Q8 247 aa21.44■■□□□ 1.02
SHROOM1-204ENST00000440118 GPD1LQ8N335 351 aa21.44■■□□□ 1.02
SHROOM1-204ENST00000440118 IRF2BPLQ9H1B7 796 aa21.44■■□□□ 1.02
SHROOM1-204ENST00000440118 GDE1Q9NZC3 331 aa21.44■■□□□ 1.02
SHROOM1-204ENST00000440118 CACNA1HO95180 2353 aa21.43■■□□□ 1.02
SHROOM1-204ENST00000440118 KIAA0391O15091 583 aaKnown RBP21.43■■□□□ 1.02
SHROOM1-204ENST00000440118 ITGB3P05106 788 aa21.43■■□□□ 1.02
SHROOM1-204ENST00000440118 KRT19P08727 400 aa21.43■■□□□ 1.02
SHROOM1-204ENST00000440118 TMEM191BP0C7N4 346 aa21.43■■□□□ 1.02
SHROOM1-204ENST00000440118 POLR2BP30876 1174 aaKnown RBP21.43■■□□□ 1.02
SHROOM1-204ENST00000440118 EPHB3P54753 998 aa21.43■■□□□ 1.02
SHROOM1-204ENST00000440118 DUSP4Q13115 394 aa21.43■■□□□ 1.02
SHROOM1-204ENST00000440118 GPR17Q13304 367 aa21.43■■□□□ 1.02
SHROOM1-204ENST00000440118 RESP18Q5W5W9 173 aa21.43■■□□□ 1.02
SHROOM1-204ENST00000440118 CWF19L1Q69YN2 538 aaKnown RBP21.43■■□□□ 1.02
SHROOM1-204ENST00000440118 LEMD2Q8NC56 503 aa21.43■■□□□ 1.02
SHROOM1-204ENST00000440118 BLZF1Q9H2G9 400 aa21.43■■□□□ 1.02
SHROOM1-204ENST00000440118 SLITRK6Q9H5Y7 841 aa21.43■■□□□ 1.02
SHROOM1-204ENST00000440118 AVENQ9NQS1 362 aaPredicted RBP21.43■■□□□ 1.02
SHROOM1-204ENST00000440118 MIA3Q5JRA6 1907 aa21.43■■□□□ 1.02
SHROOM1-204ENST00000440118 EIF3DO15371 548 aaKnown RBP eCLIP21.42■■□□□ 1.02
SHROOM1-204ENST00000440118 GALR2O43603 387 aaPredicted RBP21.42■■□□□ 1.02
SHROOM1-204ENST00000440118 UBE4BO95155 1302 aa21.42■■□□□ 1.02
SHROOM1-204ENST00000440118 AOC1P19801 751 aa21.42■■□□□ 1.02
SHROOM1-204ENST00000440118 AFMP43652 599 aa21.42■■□□□ 1.02
SHROOM1-204ENST00000440118 TCF15Q12870 199 aa21.42■■□□□ 1.02
SHROOM1-204ENST00000440118 GLIS3Q8NEA6 775 aa21.42■■□□□ 1.02
SHROOM1-204ENST00000440118 ZSWIM2Q8NEG5 633 aa21.42■■□□□ 1.02
SHROOM1-204ENST00000440118 FAM200AQ8TCP9 573 aa21.42■■□□□ 1.02
SHROOM1-204ENST00000440118 ATOH1Q92858 354 aaPredicted RBP21.42■■□□□ 1.02
SHROOM1-204ENST00000440118 C7orf25Q9BPX7 421 aa21.42■■□□□ 1.02
SHROOM1-204ENST00000440118 RTP3Q9BQQ7 232 aa21.42■■□□□ 1.02
SHROOM1-204ENST00000440118 RPP25Q9BUL9 199 aaKnown RBP21.42■■□□□ 1.02
SHROOM1-204ENST00000440118 TBC1D17Q9HA65 648 aa21.42■■□□□ 1.02
SHROOM1-204ENST00000440118 SLC2A4RGQ9NR83 387 aa21.42■■□□□ 1.02
SHROOM1-204ENST00000440118 MTMR11A4FU01 709 aa21.41■■□□□ 1.02
SHROOM1-204ENST00000440118 KPNA7A9QM74 516 aa21.41■■□□□ 1.02
SHROOM1-204ENST00000440118 HOXD11P31277 338 aaPredicted RBP21.41■■□□□ 1.02
SHROOM1-204ENST00000440118 KRT85P78386 507 aa21.41■■□□□ 1.02
SHROOM1-204ENST00000440118 PFKPQ01813 784 aa21.41■■□□□ 1.02
SHROOM1-204ENST00000440118 BFSP1Q12934 665 aa21.41■■□□□ 1.02
SHROOM1-204ENST00000440118 SLC39A12Q504Y0 691 aa21.41■■□□□ 1.02
SHROOM1-204ENST00000440118 UNC13DQ70J99 1090 aa21.41■■□□□ 1.02
SHROOM1-204ENST00000440118 ALYREFQ86V81 257 aaKnown RBP21.41■■□□□ 1.02
SHROOM1-204ENST00000440118 HS6ST3Q8IZP7 471 aa21.41■■□□□ 1.02
SHROOM1-204ENST00000440118 TCEAL4Q96EI5 215 aa21.41■■□□□ 1.02
SHROOM1-204ENST00000440118 ANKRD36BP1Q96IX9 119 aa21.41■■□□□ 1.02
SHROOM1-204ENST00000440118 SPATA32Q96LK8 384 aa21.41■■□□□ 1.02
SHROOM1-204ENST00000440118 SEPT5Q99719 369 aaPredicted RBP21.41■■□□□ 1.02
SHROOM1-204ENST00000440118 PDE11AQ9HCR9 933 aa21.41■■□□□ 1.02
SHROOM1-204ENST00000440118 CEP72Q9P209 647 aa21.41■■□□□ 1.02
SHROOM1-204ENST00000440118 ITGA11Q9UKX5 1188 aa21.41■■□□□ 1.02
SHROOM1-204ENST00000440118 AGAP1Q9UPQ3 857 aa21.41■■□□□ 1.02
SHROOM1-204ENST00000440118 SLC27A5Q9Y2P5 690 aa21.41■■□□□ 1.02
SHROOM1-204ENST00000440118 KRBA1A5PL33 1030 aa21.4■■□□□ 1.02
SHROOM1-204ENST00000440118 ZNF233A6NK53 670 aa21.4■■□□□ 1.02
SHROOM1-204ENST00000440118 TNNC2P02585 160 aa21.4■■□□□ 1.02
SHROOM1-204ENST00000440118 CYP11A1P05108 521 aa21.4■■□□□ 1.02
SHROOM1-204ENST00000440118 GPC5P78333 572 aa21.4■■□□□ 1.02
SHROOM1-204ENST00000440118 VEPH1Q14D04 833 aa21.4■■□□□ 1.02
SHROOM1-204ENST00000440118 MGAT5BQ3V5L5 792 aa21.4■■□□□ 1.02
SHROOM1-204ENST00000440118 PRSS36Q5K4E3 855 aa21.4■■□□□ 1.02
SHROOM1-204ENST00000440118 WSCD1Q658N2 575 aa21.4■■□□□ 1.02
SHROOM1-204ENST00000440118 HS2ST1Q7LGA3 356 aa21.4■■□□□ 1.02
SHROOM1-204ENST00000440118 NELFCDQ8IXH7 590 aa21.4■■□□□ 1.02
SHROOM1-204ENST00000440118 CSGALNACT2Q8N6G5 542 aa21.4■■□□□ 1.02
SHROOM1-204ENST00000440118 ATAD1Q8NBU5 361 aa21.4■■□□□ 1.02
SHROOM1-204ENST00000440118 OR10T2Q8NGX3 314 aa21.4■■□□□ 1.02
SHROOM1-204ENST00000440118 SHDQ96IW2 340 aa21.4■■□□□ 1.02
SHROOM1-204ENST00000440118 TMEM209Q96SK2 561 aa21.4■■□□□ 1.02
SHROOM1-204ENST00000440118 MTMR12Q9C0I1 747 aa21.4■■□□□ 1.02
SHROOM1-204ENST00000440118 HSPBP1Q9NZL4 362 aa21.4■■□□□ 1.02
SHROOM1-204ENST00000440118 H0Y858 1186 aa21.39■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms