RNA–Protein interactions for RNA: ENST00000440097.5

LIMD1-202, Transcript of LIM domains containing 1, humanhuman

TSL 5 BASIC

Gene LIMD1, Length 2,773 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-202ENST00000440097 MAML3Q96JK9 1138 aa15.06■□□□□ 0
LIMD1-202ENST00000440097 MORF4L1Q9UBU8 362 aa15.06■□□□□ 0
LIMD1-202ENST00000440097 THAP12O43422 761 aa15.05■□□□□ 0
LIMD1-202ENST00000440097 COMTP21964 271 aa15.05■□□□□ 0
LIMD1-202ENST00000440097 PTENP60484 403 aa15.05■□□□□ 0
LIMD1-202ENST00000440097 MYL6P60660 151 aa15.05■□□□□ 0
LIMD1-202ENST00000440097 PPP2R2AP63151 447 aa15.05■□□□□ 0
LIMD1-202ENST00000440097 MCL1Q07820 350 aa15.05■□□□□ 0
LIMD1-202ENST00000440097 CLEC16AQ2KHT3 1053 aa15.05■□□□□ 0
LIMD1-202ENST00000440097 RBBP8NLQ8NC74 664 aaPredicted RBP15.05■□□□□ 0
LIMD1-202ENST00000440097 OR6J1Q8NGC5 347 aa15.05■□□□□ 0
LIMD1-202ENST00000440097 MAGEC3Q8TD91 643 aa15.05■□□□□ 0
LIMD1-202ENST00000440097 KCNN1Q92952 543 aa15.05■□□□□ 0
LIMD1-202ENST00000440097 NEUROG2Q9H2A3 272 aa15.05■□□□□ 0
LIMD1-202ENST00000440097 GTF3C4Q9UKN8 822 aa15.05■□□□□ 0
LIMD1-202ENST00000440097 ASAP2O43150 1006 aa15.05■□□□□ -0
LIMD1-202ENST00000440097 ITGA4P13612 1032 aa15.05■□□□□ -0
LIMD1-202ENST00000440097 PAX7P23759 505 aa15.05■□□□□ -0
LIMD1-202ENST00000440097 CLNS1AP54105 237 aaKnown RBP15.05■□□□□ -0
LIMD1-202ENST00000440097 TINF2Q9BSI4 451 aa15.05■□□□□ -0
LIMD1-202ENST00000440097 LAMA2P24043 3122 aaKnown RBP15.04■□□□□ -0
LIMD1-202ENST00000440097 C5orf60A6NFR6 353 aa15.04■□□□□ -0
LIMD1-202ENST00000440097 DCDC2CA8MYV0 355 aa15.04■□□□□ -0
LIMD1-202ENST00000440097 TNNC2P02585 160 aa15.04■□□□□ -0
LIMD1-202ENST00000440097 IQCF3P0C7M6 154 aa15.04■□□□□ -0
LIMD1-202ENST00000440097 CXCL8P10145 99 aa15.04■□□□□ -0
LIMD1-202ENST00000440097 MBTD1Q05BQ5 628 aa15.04■□□□□ -0
LIMD1-202ENST00000440097 XRCC4Q13426 336 aa15.04■□□□□ -0
LIMD1-202ENST00000440097 ACVR2BQ13705 512 aa15.04■□□□□ -0
LIMD1-202ENST00000440097 FAM110CQ1W6H9 321 aa15.04■□□□□ -0
LIMD1-202ENST00000440097 LACTB2Q53H82 288 aaPredicted RBP15.04■□□□□ -0
LIMD1-202ENST00000440097 TSHZ1Q6ZSZ6 1077 aa15.04■□□□□ -0
LIMD1-202ENST00000440097 CPNE8Q86YQ8 564 aa15.04■□□□□ -0
LIMD1-202ENST00000440097 PPP1R13LQ8WUF5 828 aa15.04■□□□□ -0
LIMD1-202ENST00000440097 UBLCP1Q8WVY7 318 aaPredicted RBP15.04■□□□□ -0
LIMD1-202ENST00000440097 RPF1Q9H9Y2 349 aaKnown RBP15.04■□□□□ -0
LIMD1-202ENST00000440097 ANAPC7Q9UJX3 599 aa15.04■□□□□ -0
LIMD1-202ENST00000440097 TMEM59LQ9UK28 342 aa15.04■□□□□ -0
LIMD1-202ENST00000440097 CPSF3Q9UKF6 684 aaKnown RBP15.04■□□□□ -0
LIMD1-202ENST00000440097 NOVA2Q9UNW9 492 aaKnown RBP15.04■□□□□ -0
LIMD1-202ENST00000440097 PLXNB2O15031 1838 aa15.04■□□□□ -0
LIMD1-202ENST00000440097 MAGEB2O15479 319 aa15.04■□□□□ -0
LIMD1-202ENST00000440097 SART1O43290 800 aaKnown RBP15.04■□□□□ -0
LIMD1-202ENST00000440097 SMPD1P17405 629 aa15.04■□□□□ -0
LIMD1-202ENST00000440097 MAPK4P31152 587 aa15.04■□□□□ -0
LIMD1-202ENST00000440097 AP3M2P53677 418 aa15.04■□□□□ -0
LIMD1-202ENST00000440097 DCAF12L1Q5VU92 463 aa15.04■□□□□ -0
LIMD1-202ENST00000440097 C11orf63Q6NUN7 778 aa15.04■□□□□ -0
LIMD1-202ENST00000440097 RUFY4Q6ZNE9 571 aa15.04■□□□□ -0
LIMD1-202ENST00000440097 KIRREL3Q8IZU9 778 aa15.04■□□□□ -0
LIMD1-202ENST00000440097 ALG3Q92685 438 aa15.04■□□□□ -0
LIMD1-202ENST00000440097 KRT35Q92764 455 aa15.04■□□□□ -0
LIMD1-202ENST00000440097 LRRC45Q96CN5 670 aa15.04■□□□□ -0
LIMD1-202ENST00000440097 FAXDC2Q96IV6 333 aa15.04■□□□□ -0
LIMD1-202ENST00000440097 ANKRD36BP1Q96IX9 119 aa15.04■□□□□ -0
LIMD1-202ENST00000440097 CPB2Q96IY4 423 aa15.04■□□□□ -0
LIMD1-202ENST00000440097 ABHD16BQ9H3Z7 469 aa15.04■□□□□ -0
LIMD1-202ENST00000440097 FZD8Q9H461 694 aa15.04■□□□□ -0
LIMD1-202ENST00000440097 PRMT7Q9NVM4 692 aaPredicted RBP15.04■□□□□ -0
LIMD1-202ENST00000440097 NXF1Q9UBU9 619 aaKnown RBP15.04■□□□□ -0
LIMD1-202ENST00000440097 AMACRQ9UHK6 382 aa15.04■□□□□ -0
LIMD1-202ENST00000440097 NR2E1Q9Y466 385 aa15.04■□□□□ -0
LIMD1-202ENST00000440097 DDX3YO15523 660 aaKnown RBP15.03■□□□□ -0
LIMD1-202ENST00000440097 FAM189A1O60320 539 aa15.03■□□□□ -0
LIMD1-202ENST00000440097 FLT3P36888 993 aa15.03■□□□□ -0
LIMD1-202ENST00000440097 MARCKSL1P49006 195 aa15.03■□□□□ -0
LIMD1-202ENST00000440097 CUL1Q13616 776 aa15.03■□□□□ -0
LIMD1-202ENST00000440097 GRB14Q14449 540 aa15.03■□□□□ -0
LIMD1-202ENST00000440097 SURF1Q15526 300 aa15.03■□□□□ -0
LIMD1-202ENST00000440097 ZNF699Q32M78 642 aa15.03■□□□□ -0
LIMD1-202ENST00000440097 AADACL2Q6P093 401 aa15.03■□□□□ -0
LIMD1-202ENST00000440097 TLDC1Q6P9B6 456 aa15.03■□□□□ -0
LIMD1-202ENST00000440097 TMEM192Q8IY95 271 aa15.03■□□□□ -0
LIMD1-202ENST00000440097 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP15.03■□□□□ -0
LIMD1-202ENST00000440097 C11orf70Q9BRQ4 267 aa15.03■□□□□ -0
LIMD1-202ENST00000440097 CDT1Q9H211 546 aa15.03■□□□□ -0
LIMD1-202ENST00000440097 CARD9Q9H257 536 aa15.03■□□□□ -0
LIMD1-202ENST00000440097 IFT122Q9HBG6 1241 aa15.03■□□□□ -0
LIMD1-202ENST00000440097 PLXNA1Q9UIW2 1896 aa15.03■□□□□ -0
LIMD1-202ENST00000440097 GOLGA6L10A0A0M3HER8 536 aa15.03■□□□□ -0
LIMD1-202ENST00000440097 MIF4GDA9UHW6 222 aaKnown RBP15.03■□□□□ -0
LIMD1-202ENST00000440097 RPSAP08865 295 aaKnown RBP15.03■□□□□ -0
LIMD1-202ENST00000440097 MAGOHP61326 146 aaKnown RBP15.03■□□□□ -0
LIMD1-202ENST00000440097 CRYMQ14894 314 aa15.03■□□□□ -0
LIMD1-202ENST00000440097 LLGL1Q15334 1064 aa15.03■□□□□ -0
LIMD1-202ENST00000440097 PRAMEF19Q5SWL8 479 aa15.03■□□□□ -0
LIMD1-202ENST00000440097 GKAP1Q5VSY0 366 aaPredicted RBP15.03■□□□□ -0
LIMD1-202ENST00000440097 MAMDC4Q6UXC1 1216 aa15.03■□□□□ -0
LIMD1-202ENST00000440097 CPLX4Q7Z7G2 160 aa15.03■□□□□ -0
LIMD1-202ENST00000440097 ZNF677Q86XU0 584 aa15.03■□□□□ -0
LIMD1-202ENST00000440097 CCT6BQ92526 530 aa15.03■□□□□ -0
LIMD1-202ENST00000440097 MAGOHBQ96A72 148 aaKnown RBP15.03■□□□□ -0
LIMD1-202ENST00000440097 CALR3Q96L12 384 aaKnown RBP15.03■□□□□ -0
LIMD1-202ENST00000440097 NAP1L3Q99457 506 aaPredicted RBP15.03■□□□□ -0
LIMD1-202ENST00000440097 SLC5A4Q9NY91 659 aa15.03■□□□□ -0
LIMD1-202ENST00000440097 UVRAGQ9P2Y5 699 aa15.03■□□□□ -0
LIMD1-202ENST00000440097 CCDC188H7C350 402 aa15.02■□□□□ -0
LIMD1-202ENST00000440097 DYNC1LI2O43237 492 aaPredicted RBP15.02■□□□□ -0
LIMD1-202ENST00000440097 NEBLO76041 1014 aa15.02■□□□□ -0
LIMD1-202ENST00000440097 CYP1A2P05177 515 aa15.02■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 310.3 ms