RNA–Protein interactions for RNA: ENST00000440048.1

VARS-217, Transcript of valyl-tRNA synthetase, humanhuman

TSL 1 (best)

Gene VARS, Length 804 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-217ENST00000440048 ELF1P32519 619 aa25.5■■□□□ 1.67
VARS-217ENST00000440048 PNPLA4P41247 253 aa25.5■■□□□ 1.67
VARS-217ENST00000440048 CYP24A1Q07973 514 aa25.5■■□□□ 1.67
VARS-217ENST00000440048 PNOCQ13519 176 aa25.5■■□□□ 1.67
VARS-217ENST00000440048 OTOP3Q7RTS5 596 aa25.5■■□□□ 1.67
VARS-217ENST00000440048 ZDHHC14Q8IZN3 488 aa25.5■■□□□ 1.67
VARS-217ENST00000440048 DOCK8Q8NF50 2099 aa25.5■■□□□ 1.67
VARS-217ENST00000440048 C11orf16Q9NQ32 467 aa25.5■■□□□ 1.67
VARS-217ENST00000440048 CHMP5Q9NZZ3 219 aa25.5■■□□□ 1.67
VARS-217ENST00000440048 SIX4Q9UIU6 781 aa25.5■■□□□ 1.67
VARS-217ENST00000440048 PRR33A8MZF0 331 aa25.49■■□□□ 1.67
VARS-217ENST00000440048 PRRG1O14668 218 aa25.49■■□□□ 1.67
VARS-217ENST00000440048 EXOC3O60645 756 aa25.49■■□□□ 1.67
VARS-217ENST00000440048 SEC24AO95486 1093 aa25.49■■□□□ 1.67
VARS-217ENST00000440048 OR4Q2P0C623 313 aa25.49■■□□□ 1.67
VARS-217ENST00000440048 CPB1P15086 417 aa25.49■■□□□ 1.67
VARS-217ENST00000440048 RBP5P82980 135 aa25.49■■□□□ 1.67
VARS-217ENST00000440048 PSMD6Q15008 389 aa25.49■■□□□ 1.67
VARS-217ENST00000440048 DUOXA2Q1HG44 320 aa25.49■■□□□ 1.67
VARS-217ENST00000440048 WDR49Q8IV35 697 aa25.49■■□□□ 1.67
VARS-217ENST00000440048 TCEAL8Q8IYN2 117 aa25.49■■□□□ 1.67
VARS-217ENST00000440048 LRRC52Q8N7C0 313 aa25.49■■□□□ 1.67
VARS-217ENST00000440048 ACSF2Q96CM8 615 aaPredicted RBP25.49■■□□□ 1.67
VARS-217ENST00000440048 CYP4F11Q9HBI6 524 aa25.49■■□□□ 1.67
VARS-217ENST00000440048 DMAC2Q9NW81 257 aa25.49■■□□□ 1.67
VARS-217ENST00000440048 AFF4Q9UHB7 1163 aaKnown RBP25.49■■□□□ 1.67
VARS-217ENST00000440048 DSEQ9UL01 958 aa25.49■■□□□ 1.67
VARS-217ENST00000440048 PDXKO00764 312 aa25.48■■□□□ 1.67
VARS-217ENST00000440048 XYLBO75191 536 aa25.48■■□□□ 1.67
VARS-217ENST00000440048 TNNC2P02585 160 aa25.48■■□□□ 1.67
VARS-217ENST00000440048 KRT19P08727 400 aa25.48■■□□□ 1.67
VARS-217ENST00000440048 POU2F2P09086 479 aa25.48■■□□□ 1.67
VARS-217ENST00000440048 DLATP10515 647 aaKnown RBP25.48■■□□□ 1.67
VARS-217ENST00000440048 ADCY1Q08828 1119 aa25.48■■□□□ 1.67
VARS-217ENST00000440048 RNF19BQ6ZMZ0 732 aa25.48■■□□□ 1.67
VARS-217ENST00000440048 GRASPQ7Z6J2 395 aaPredicted RBP25.48■■□□□ 1.67
VARS-217ENST00000440048 SLC9A9Q8IVB4 645 aa25.48■■□□□ 1.67
VARS-217ENST00000440048 PLCD3Q8N3E9 789 aa25.48■■□□□ 1.67
VARS-217ENST00000440048 CCDC127Q96BQ5 260 aa25.48■■□□□ 1.67
VARS-217ENST00000440048 MFSD14AQ96MC6 490 aa25.48■■□□□ 1.67
VARS-217ENST00000440048 POLIQ9UNA4 740 aa25.48■■□□□ 1.67
VARS-217ENST00000440048 NOTCH4Q99466 2003 aa25.47■■□□□ 1.67
VARS-217ENST00000440048 N4BP1O75113 896 aaKnown RBP25.47■■□□□ 1.67
VARS-217ENST00000440048 KIF20AO95235 890 aa25.47■■□□□ 1.67
VARS-217ENST00000440048 BFSP1Q12934 665 aa25.47■■□□□ 1.67
VARS-217ENST00000440048 MYBPC2Q14324 1141 aa25.47■■□□□ 1.67
VARS-217ENST00000440048 WSCD1Q658N2 575 aa25.47■■□□□ 1.67
VARS-217ENST00000440048 METTL23Q86XA0 190 aa25.47■■□□□ 1.67
VARS-217ENST00000440048 TMEM174Q8WUU8 243 aa25.47■■□□□ 1.67
VARS-217ENST00000440048 TIGD1Q96MW7 591 aa25.47■■□□□ 1.67
VARS-217ENST00000440048 FNBP1Q96RU3 617 aa25.47■■□□□ 1.67
VARS-217ENST00000440048 CGRRF1Q99675 332 aa25.47■■□□□ 1.67
VARS-217ENST00000440048 LIMD1Q9UGP4 676 aa25.47■■□□□ 1.67
VARS-217ENST00000440048 MAFFQ9ULX9 164 aa25.47■■□□□ 1.67
VARS-217ENST00000440048 MAPK8IP1Q9UQF2 711 aa25.47■■□□□ 1.67
VARS-217ENST00000440048 FAM86C2PA6NEL3 165 aa25.46■■□□□ 1.67
VARS-217ENST00000440048 GADD45BO75293 160 aaPredicted RBP25.46■■□□□ 1.67
VARS-217ENST00000440048 NR3C1P04150 777 aa25.46■■□□□ 1.67
VARS-217ENST00000440048 TNNI1P19237 187 aa25.46■■□□□ 1.67
VARS-217ENST00000440048 NTHL1P78549 312 aa25.46■■□□□ 1.67
VARS-217ENST00000440048 GPR17Q13304 367 aa25.46■■□□□ 1.67
VARS-217ENST00000440048 GUF1Q8N442 669 aaKnown RBP25.46■■□□□ 1.67
VARS-217ENST00000440048 OR10T2Q8NGX3 314 aa25.46■■□□□ 1.67
VARS-217ENST00000440048 MYADMQ96S97 322 aa25.46■■□□□ 1.67
VARS-217ENST00000440048 TMEM209Q96SK2 561 aa25.46■■□□□ 1.67
VARS-217ENST00000440048 RTP3Q9BQQ7 232 aa25.46■■□□□ 1.67
VARS-217ENST00000440048 GZF1Q9H116 711 aaPredicted RBP25.46■■□□□ 1.67
VARS-217ENST00000440048 HCFC1R1Q9NWW0 138 aa25.46■■□□□ 1.67
VARS-217ENST00000440048 HCN4Q9Y3Q4 1203 aa25.46■■□□□ 1.67
VARS-217ENST00000440048 INSL5Q9Y5Q6 135 aa25.46■■□□□ 1.67
VARS-217ENST00000440048 PRPF40AO75400 957 aaKnown RBP25.45■■□□□ 1.66
VARS-217ENST00000440048 VNN2O95498 520 aa25.45■■□□□ 1.66
VARS-217ENST00000440048 LRG1P02750 347 aa25.45■■□□□ 1.66
VARS-217ENST00000440048 GBP2P32456 591 aaPredicted RBP25.45■■□□□ 1.66
VARS-217ENST00000440048 PTPN21Q16825 1174 aa25.45■■□□□ 1.66
VARS-217ENST00000440048 TRAPPC11Q7Z392 1133 aa25.45■■□□□ 1.66
VARS-217ENST00000440048 PLEKHO2Q8TD55 490 aa25.45■■□□□ 1.66
VARS-217ENST00000440048 PGLYRP2Q96PD5 576 aa25.45■■□□□ 1.66
VARS-217ENST00000440048 GDAP2Q9NXN4 497 aa25.45■■□□□ 1.66
VARS-217ENST00000440048 DNMT3BQ9UBC3 853 aaKnown RBP25.45■■□□□ 1.66
VARS-217ENST00000440048 TRAF3IP3Q9Y228 551 aa25.45■■□□□ 1.66
VARS-217ENST00000440048 R3HCC1Q9Y3T6 440 aaKnown RBP25.45■■□□□ 1.66
VARS-217ENST00000440048 ARIH1Q9Y4X5 557 aaPredicted RBP25.45■■□□□ 1.66
VARS-217ENST00000440048 TECTAO75443 2155 aa25.45■■□□□ 1.66
VARS-217ENST00000440048 CALUO43852 315 aaPredicted RBP25.44■■□□□ 1.66
VARS-217ENST00000440048 FSHRP23945 695 aa25.44■■□□□ 1.66
VARS-217ENST00000440048 GET4Q7L5D6 327 aaPredicted RBP25.44■■□□□ 1.66
VARS-217ENST00000440048 THEM5Q8N1Q8 247 aa25.44■■□□□ 1.66
VARS-217ENST00000440048 ZNF516Q92618 1163 aa25.44■■□□□ 1.66
VARS-217ENST00000440048 EDAQ92838 391 aa25.44■■□□□ 1.66
VARS-217ENST00000440048 RMND1Q9NWS8 449 aa25.44■■□□□ 1.66
VARS-217ENST00000440048 L1RE1Q9UN81 338 aa25.44■■□□□ 1.66
VARS-217ENST00000440048 HUS1O60921 280 aa25.43■■□□□ 1.66
VARS-217ENST00000440048 ASGR2P07307 311 aa25.43■■□□□ 1.66
VARS-217ENST00000440048 CASP4P49662 377 aa25.43■■□□□ 1.66
VARS-217ENST00000440048 ZXDAP98168 799 aa25.43■■□□□ 1.66
VARS-217ENST00000440048 MYO1EQ12965 1108 aa25.43■■□□□ 1.66
VARS-217ENST00000440048 SMYD4Q8IYR2 804 aaPredicted RBP25.43■■□□□ 1.66
VARS-217ENST00000440048 PDCL2Q8N4E4 241 aa25.43■■□□□ 1.66
VARS-217ENST00000440048 ERCC4Q92889 916 aaPredicted RBP25.43■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms