RNA–Protein interactions for RNA: ENST00000439958.7

CPSF7-205, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CPSF7, Length 3,524 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-205ENST00000439958 FAM193AP78312 1265 aa16.03■□□□□ 0.16
CPSF7-205ENST00000439958 C12orf29Q8N999 325 aa16.03■□□□□ 0.16
CPSF7-205ENST00000439958 DDX47Q9H0S4 455 aaKnown RBP16.03■□□□□ 0.16
CPSF7-205ENST00000439958 XYLT2Q9H1B5 865 aa16.03■□□□□ 0.16
CPSF7-205ENST00000439958 ISCUQ9H1K1 167 aa16.03■□□□□ 0.16
CPSF7-205ENST00000439958 ST3GAL5Q9UNP4 418 aa16.03■□□□□ 0.16
CPSF7-205ENST00000439958 ZSWIM8A7E2V4 1837 aa16.03■□□□□ 0.16
CPSF7-205ENST00000439958 MBLAC1A4D2B0 266 aaPredicted RBP16.03■□□□□ 0.16
CPSF7-205ENST00000439958 M0QYV0 167 aa16.03■□□□□ 0.16
CPSF7-205ENST00000439958 MEFVO15553 781 aaPredicted RBP16.03■□□□□ 0.16
CPSF7-205ENST00000439958 ASPAP45381 313 aa16.03■□□□□ 0.16
CPSF7-205ENST00000439958 APLP1P51693 650 aa16.03■□□□□ 0.16
CPSF7-205ENST00000439958 CBX1P83916 185 aa16.03■□□□□ 0.16
CPSF7-205ENST00000439958 TAF2Q6P1X5 1199 aa16.03■□□□□ 0.16
CPSF7-205ENST00000439958 RNF180Q86T96 592 aa16.03■□□□□ 0.16
CPSF7-205ENST00000439958 NT5DC3Q86UY8 548 aa16.03■□□□□ 0.16
CPSF7-205ENST00000439958 LRRC57Q8N9N7 239 aa16.03■□□□□ 0.16
CPSF7-205ENST00000439958 BEST2Q8NFU1 509 aa16.03■□□□□ 0.16
CPSF7-205ENST00000439958 TWNKQ96RR1 684 aa16.03■□□□□ 0.16
CPSF7-205ENST00000439958 ANKZF1Q9H8Y5 726 aa16.03■□□□□ 0.16
CPSF7-205ENST00000439958 INTUQ9ULD6 942 aa16.03■□□□□ 0.16
CPSF7-205ENST00000439958 GZMAP12544 262 aa16.03■□□□□ 0.16
CPSF7-205ENST00000439958 MRPS6P82932 125 aaKnown RBP16.03■□□□□ 0.16
CPSF7-205ENST00000439958 POU5F1BQ06416 359 aa16.03■□□□□ 0.16
CPSF7-205ENST00000439958 OLIG1Q8TAK6 271 aa16.03■□□□□ 0.16
CPSF7-205ENST00000439958 RPS6KC1Q96S38 1066 aa16.03■□□□□ 0.16
CPSF7-205ENST00000439958 GTF2IRD1Q9UHL9 959 aa16.03■□□□□ 0.16
CPSF7-205ENST00000439958 KIAA0100Q14667 2235 aaKnown RBP16.03■□□□□ 0.16
CPSF7-205ENST00000439958 HCRTO43612 131 aa16.02■□□□□ 0.16
CPSF7-205ENST00000439958 CD52P31358 61 aa16.02■□□□□ 0.16
CPSF7-205ENST00000439958 GRM5P41594 1212 aa16.02■□□□□ 0.16
CPSF7-205ENST00000439958 RGS7P49802 495 aa16.02■□□□□ 0.16
CPSF7-205ENST00000439958 CRYBB1P53674 252 aaPredicted RBP16.02■□□□□ 0.16
CPSF7-205ENST00000439958 GJA9P57773 515 aa16.02■□□□□ 0.16
CPSF7-205ENST00000439958 CDC42EP1Q00587 391 aa16.02■□□□□ 0.16
CPSF7-205ENST00000439958 ACOT1Q86TX2 421 aa16.02■□□□□ 0.16
CPSF7-205ENST00000439958 ERICH1Q86X53 443 aa16.02■□□□□ 0.16
CPSF7-205ENST00000439958 MCOLN2Q8IZK6 566 aa16.02■□□□□ 0.16
CPSF7-205ENST00000439958 UBL4BQ8N7F7 174 aa16.02■□□□□ 0.16
CPSF7-205ENST00000439958 GLT1D1Q96MS3 346 aa16.02■□□□□ 0.16
CPSF7-205ENST00000439958 BEGAINQ9BUH8 593 aa16.02■□□□□ 0.16
CPSF7-205ENST00000439958 SDCBP2Q9H190 292 aa16.02■□□□□ 0.16
CPSF7-205ENST00000439958 NDST1P52848 882 aa16.02■□□□□ 0.16
CPSF7-205ENST00000439958 YWHAEP62258 255 aaKnown RBP16.02■□□□□ 0.16
CPSF7-205ENST00000439958 HLTFQ14527 1009 aaKnown RBP eCLIP16.02■□□□□ 0.16
CPSF7-205ENST00000439958 FAM228AQ86W67 206 aa16.02■□□□□ 0.16
CPSF7-205ENST00000439958 TMEM35BQ8NCS4 154 aa16.02■□□□□ 0.16
CPSF7-205ENST00000439958 LPIN3Q9BQK8 851 aa16.02■□□□□ 0.16
CPSF7-205ENST00000439958 GTF3C4Q9UKN8 822 aa16.02■□□□□ 0.16
CPSF7-205ENST00000439958 IPPQ9Y573 584 aa16.02■□□□□ 0.16
CPSF7-205ENST00000439958 ZSCAN5CA6NGD5 496 aaPredicted RBP16.02■□□□□ 0.15
CPSF7-205ENST00000439958 HMGCRP04035 888 aa16.02■□□□□ 0.15
CPSF7-205ENST00000439958 MLH1P40692 756 aa16.02■□□□□ 0.15
CPSF7-205ENST00000439958 ZNF784Q8NCA9 323 aaPredicted RBP16.02■□□□□ 0.15
CPSF7-205ENST00000439958 ACSF2Q96CM8 615 aaPredicted RBP16.02■□□□□ 0.15
CPSF7-205ENST00000439958 GAD1Q99259 594 aa16.02■□□□□ 0.15
CPSF7-205ENST00000439958 HAS3O00219 553 aa16.01■□□□□ 0.15
CPSF7-205ENST00000439958 PGRMC1O00264 195 aaKnown RBP16.01■□□□□ 0.15
CPSF7-205ENST00000439958 INHAP05111 366 aa16.01■□□□□ 0.15
CPSF7-205ENST00000439958 DNAJC24Q6P3W2 148 aa16.01■□□□□ 0.15
CPSF7-205ENST00000439958 HASPINQ8TF76 798 aa16.01■□□□□ 0.15
CPSF7-205ENST00000439958 MCEEQ96PE7 176 aa16.01■□□□□ 0.15
CPSF7-205ENST00000439958 OSBPL7Q9BZF2 842 aa16.01■□□□□ 0.15
CPSF7-205ENST00000439958 ERLIN1O75477 346 aa16.01■□□□□ 0.15
CPSF7-205ENST00000439958 GRAP2O75791 330 aa16.01■□□□□ 0.15
CPSF7-205ENST00000439958 ITGA4P13612 1032 aa16.01■□□□□ 0.15
CPSF7-205ENST00000439958 ITGA7Q13683 1181 aa16.01■□□□□ 0.15
CPSF7-205ENST00000439958 DENND1BQ6P3S1 775 aa16.01■□□□□ 0.15
CPSF7-205ENST00000439958 ZNF296Q8WUU4 475 aaPredicted RBP16.01■□□□□ 0.15
CPSF7-205ENST00000439958 RNPC3Q96LT9 517 aaKnown RBP16.01■□□□□ 0.15
CPSF7-205ENST00000439958 TJP2Q9UDY2 1190 aa16.01■□□□□ 0.15
CPSF7-205ENST00000439958 NOMO3P69849 1222 aa16.01■□□□□ 0.15
CPSF7-205ENST00000439958 GUCY2DQ02846 1103 aa16.01■□□□□ 0.15
CPSF7-205ENST00000439958 SMC1AQ14683 1233 aaKnown RBP16.01■□□□□ 0.15
CPSF7-205ENST00000439958 IFNLR1Q8IU57 520 aaPredicted RBP16.01■□□□□ 0.15
CPSF7-205ENST00000439958 ALG3Q92685 438 aa16.01■□□□□ 0.15
CPSF7-205ENST00000439958 TRPV6Q9H1D0 765 aa16.01■□□□□ 0.15
CPSF7-205ENST00000439958 DMGDHQ9UI17 866 aaKnown RBP16.01■□□□□ 0.15
CPSF7-205ENST00000439958 Q9Y3F1 56 aa16.01■□□□□ 0.15
CPSF7-205ENST00000439958 TIMM13Q9Y5L4 95 aaPredicted RBP16.01■□□□□ 0.15
CPSF7-205ENST00000439958 A0A0A6YYK5 440 aaPredicted RBP16■□□□□ 0.15
CPSF7-205ENST00000439958 A8MXQ7 604 aa16■□□□□ 0.15
CPSF7-205ENST00000439958 AFF1P51825 1210 aaKnown RBP16■□□□□ 0.15
CPSF7-205ENST00000439958 HEMGNQ9BXL5 484 aa16■□□□□ 0.15
CPSF7-205ENST00000439958 ABCB6Q9NP58 842 aa16■□□□□ 0.15
CPSF7-205ENST00000439958 TRPV2Q9Y5S1 764 aa16■□□□□ 0.15
CPSF7-205ENST00000439958 SMIM28A0A1B0GU29 152 aa16■□□□□ 0.15
CPSF7-205ENST00000439958 ADORA2BP29275 332 aa16■□□□□ 0.15
CPSF7-205ENST00000439958 RPL7AP62424 266 aaKnown RBP16■□□□□ 0.15
CPSF7-205ENST00000439958 FAM118BQ9BPY3 351 aa16■□□□□ 0.15
CPSF7-205ENST00000439958 CASTOR2A6NHX0 329 aa15.99■□□□□ 0.15
CPSF7-205ENST00000439958 POMCP01189 267 aa15.99■□□□□ 0.15
CPSF7-205ENST00000439958 ATN1P54259 1190 aaPredicted RBP15.99■□□□□ 0.15
CPSF7-205ENST00000439958 PTPN11Q06124 597 aaPredicted RBP15.99■□□□□ 0.15
CPSF7-205ENST00000439958 KYAT1Q16773 422 aa15.99■□□□□ 0.15
CPSF7-205ENST00000439958 SEL1L2Q5TEA6 688 aa15.99■□□□□ 0.15
CPSF7-205ENST00000439958 PCSK9Q8NBP7 692 aaKnown RBP15.99■□□□□ 0.15
CPSF7-205ENST00000439958 ZSWIM1Q9BR11 485 aa15.99■□□□□ 0.15
CPSF7-205ENST00000439958 MRPL45Q9BRJ2 306 aaKnown RBP15.99■□□□□ 0.15
CPSF7-205ENST00000439958 ELOVL4Q9GZR5 314 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms