RNA–Protein interactions for RNA: ENST00000439518.5

NCKIPSD-206, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 1 (best)

Gene NCKIPSD, Length 1,214 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-206ENST00000439518 NBL1P41271 181 aa21.97■■□□□ 1.11
NCKIPSD-206ENST00000439518 DUSP4Q13115 394 aa21.97■■□□□ 1.11
NCKIPSD-206ENST00000439518 CYP4A22Q5TCH4 519 aa21.97■■□□□ 1.11
NCKIPSD-206ENST00000439518 CENPPQ6IPU0 288 aa21.97■■□□□ 1.11
NCKIPSD-206ENST00000439518 PDZD4Q76G19 769 aaPredicted RBP21.97■■□□□ 1.11
NCKIPSD-206ENST00000439518 NT5DC4Q86YG4 428 aa21.97■■□□□ 1.11
NCKIPSD-206ENST00000439518 LEMD2Q8NC56 503 aa21.97■■□□□ 1.11
NCKIPSD-206ENST00000439518 ZSWIM2Q8NEG5 633 aa21.97■■□□□ 1.11
NCKIPSD-206ENST00000439518 ELSPBP1Q96BH3 223 aa21.97■■□□□ 1.11
NCKIPSD-206ENST00000439518 SHDQ96IW2 340 aa21.97■■□□□ 1.11
NCKIPSD-206ENST00000439518 FAM213AQ9BRX8 229 aa21.97■■□□□ 1.11
NCKIPSD-206ENST00000439518 PLA2G2FQ9BZM2 168 aa21.97■■□□□ 1.11
NCKIPSD-206ENST00000439518 KBTBD4Q9NVX7 518 aa21.97■■□□□ 1.11
NCKIPSD-206ENST00000439518 DLGAP2Q9P1A6 1054 aa21.97■■□□□ 1.11
NCKIPSD-206ENST00000439518 PDIA4P13667 645 aaKnown RBP21.96■■□□□ 1.11
NCKIPSD-206ENST00000439518 WNT7BP56706 349 aa21.96■■□□□ 1.11
NCKIPSD-206ENST00000439518 PFKPQ01813 784 aa21.96■■□□□ 1.11
NCKIPSD-206ENST00000439518 SNW1Q13573 536 aaKnown RBP21.96■■□□□ 1.11
NCKIPSD-206ENST00000439518 SLC44A4Q53GD3 710 aa21.96■■□□□ 1.11
NCKIPSD-206ENST00000439518 FAM78AQ5JUQ0 283 aa21.96■■□□□ 1.11
NCKIPSD-206ENST00000439518 TANGO2Q6ICL3 276 aa21.96■■□□□ 1.11
NCKIPSD-206ENST00000439518 BRSK2Q8IWQ3 736 aa21.96■■□□□ 1.11
NCKIPSD-206ENST00000439518 CCDC65Q8IXS2 484 aa21.96■■□□□ 1.11
NCKIPSD-206ENST00000439518 OR10T2Q8NGX3 314 aa21.96■■□□□ 1.11
NCKIPSD-206ENST00000439518 SAAL1Q96ER3 474 aa21.96■■□□□ 1.11
NCKIPSD-206ENST00000439518 BORCS6Q96GS4 357 aa21.96■■□□□ 1.11
NCKIPSD-206ENST00000439518 TMEM209Q96SK2 561 aa21.96■■□□□ 1.11
NCKIPSD-206ENST00000439518 DDX23Q9BUQ8 820 aaKnown RBP21.96■■□□□ 1.11
NCKIPSD-206ENST00000439518 LRRC3Q9BY71 257 aa21.96■■□□□ 1.11
NCKIPSD-206ENST00000439518 TNMDQ9H2S6 317 aa21.96■■□□□ 1.11
NCKIPSD-206ENST00000439518 CUEDC2Q9H467 287 aa21.96■■□□□ 1.11
NCKIPSD-206ENST00000439518 ASAH2Q9NR71 780 aa21.96■■□□□ 1.11
NCKIPSD-206ENST00000439518 SIT1Q9Y3P8 196 aa21.96■■□□□ 1.11
NCKIPSD-206ENST00000439518 VPS13AQ96RL7 3174 aa21.95■■□□□ 1.11
NCKIPSD-206ENST00000439518 MTMR11A4FU01 709 aa21.95■■□□□ 1.1
NCKIPSD-206ENST00000439518 CUTAO60888 179 aa21.95■■□□□ 1.1
NCKIPSD-206ENST00000439518 TAF6P49848 677 aa21.95■■□□□ 1.1
NCKIPSD-206ENST00000439518 ANGPT1Q15389 498 aa21.95■■□□□ 1.1
NCKIPSD-206ENST00000439518 MLF2Q15773 248 aaPredicted RBP21.95■■□□□ 1.1
NCKIPSD-206ENST00000439518 ARMCX5Q6P1M9 558 aa21.95■■□□□ 1.1
NCKIPSD-206ENST00000439518 SHC4Q6S5L8 630 aa21.95■■□□□ 1.1
NCKIPSD-206ENST00000439518 SYCP3Q8IZU3 236 aa21.95■■□□□ 1.1
NCKIPSD-206ENST00000439518 ATAD1Q8NBU5 361 aa21.95■■□□□ 1.1
NCKIPSD-206ENST00000439518 PJA1Q8NG27 643 aa21.95■■□□□ 1.1
NCKIPSD-206ENST00000439518 ZSWIM3Q96MP5 696 aa21.95■■□□□ 1.1
NCKIPSD-206ENST00000439518 ASB16Q96NS5 453 aa21.95■■□□□ 1.1
NCKIPSD-206ENST00000439518 FOXQ1Q9C009 403 aa21.95■■□□□ 1.1
NCKIPSD-206ENST00000439518 DNAJC25Q9H1X3 360 aa21.95■■□□□ 1.1
NCKIPSD-206ENST00000439518 DSEQ9UL01 958 aa21.95■■□□□ 1.1
NCKIPSD-206ENST00000439518 PTPRZ1P23471 2315 aaPredicted RBP21.94■■□□□ 1.1
NCKIPSD-206ENST00000439518 CYB561D2O14569 222 aa21.94■■□□□ 1.1
NCKIPSD-206ENST00000439518 LDHAP00338 332 aaKnown RBP21.94■■□□□ 1.1
NCKIPSD-206ENST00000439518 DCNP07585 359 aaKnown RBP21.94■■□□□ 1.1
NCKIPSD-206ENST00000439518 ZSCAN22P10073 491 aaPredicted RBP21.94■■□□□ 1.1
NCKIPSD-206ENST00000439518 MYL4P12829 197 aa21.94■■□□□ 1.1
NCKIPSD-206ENST00000439518 EPHB3P54753 998 aa21.94■■□□□ 1.1
NCKIPSD-206ENST00000439518 PRKCQQ04759 706 aa21.94■■□□□ 1.1
NCKIPSD-206ENST00000439518 PLD1Q13393 1074 aa21.94■■□□□ 1.1
NCKIPSD-206ENST00000439518 FOXD4L5Q5VV16 416 aaPredicted RBP21.94■■□□□ 1.1
NCKIPSD-206ENST00000439518 CNNM4Q6P4Q7 775 aa21.94■■□□□ 1.1
NCKIPSD-206ENST00000439518 TMC8Q8IU68 726 aa21.94■■□□□ 1.1
NCKIPSD-206ENST00000439518 HSCBQ8IWL3 235 aa21.94■■□□□ 1.1
NCKIPSD-206ENST00000439518 TTC9BQ8N6N2 239 aa21.94■■□□□ 1.1
NCKIPSD-206ENST00000439518 GLIS3Q8NEA6 775 aa21.94■■□□□ 1.1
NCKIPSD-206ENST00000439518 FOXD4L4Q8WXT5 416 aaPredicted RBP21.94■■□□□ 1.1
NCKIPSD-206ENST00000439518 PYM1Q9BRP8 204 aaKnown RBP21.94■■□□□ 1.1
NCKIPSD-206ENST00000439518 CBWD1Q9BRT8 395 aa21.94■■□□□ 1.1
NCKIPSD-206ENST00000439518 TRIM9Q9C026 710 aa21.94■■□□□ 1.1
NCKIPSD-206ENST00000439518 LRRC27Q9C0I9 530 aa21.94■■□□□ 1.1
NCKIPSD-206ENST00000439518 TMEM206Q9H813 350 aa21.94■■□□□ 1.1
NCKIPSD-206ENST00000439518 ZFP14Q9HCL3 533 aa21.94■■□□□ 1.1
NCKIPSD-206ENST00000439518 HSFX1Q9UBD0 423 aa21.94■■□□□ 1.1
NCKIPSD-206ENST00000439518 SLC27A5Q9Y2P5 690 aa21.94■■□□□ 1.1
NCKIPSD-206ENST00000439518 WDR87Q6ZQQ6 2873 aa21.94■■□□□ 1.1
NCKIPSD-206ENST00000439518 TSC2P49815 1807 aa21.94■■□□□ 1.1
NCKIPSD-206ENST00000439518 KANSL1LA0AUZ9 987 aa21.93■■□□□ 1.1
NCKIPSD-206ENST00000439518 PRPF6O94906 941 aaKnown RBP21.93■■□□□ 1.1
NCKIPSD-206ENST00000439518 GJA1P17302 382 aa21.93■■□□□ 1.1
NCKIPSD-206ENST00000439518 SHKBP1Q8TBC3 707 aa21.93■■□□□ 1.1
NCKIPSD-206ENST00000439518 SMARCD2Q92925 531 aa21.93■■□□□ 1.1
NCKIPSD-206ENST00000439518 HPS3Q969F9 1004 aa21.93■■□□□ 1.1
NCKIPSD-206ENST00000439518 ZCWPW1Q9H0M4 648 aa21.93■■□□□ 1.1
NCKIPSD-206ENST00000439518 TRPV4Q9HBA0 871 aa21.93■■□□□ 1.1
NCKIPSD-206ENST00000439518 RBAKQ9NYW8 714 aaPredicted RBP21.93■■□□□ 1.1
NCKIPSD-206ENST00000439518 KPNA7A9QM74 516 aa21.92■■□□□ 1.1
NCKIPSD-206ENST00000439518 EXTL3O43909 919 aa21.92■■□□□ 1.1
NCKIPSD-206ENST00000439518 GFRA3O60609 400 aa21.92■■□□□ 1.1
NCKIPSD-206ENST00000439518 F13A1P00488 732 aa21.92■■□□□ 1.1
NCKIPSD-206ENST00000439518 GLULP15104 373 aa21.92■■□□□ 1.1
NCKIPSD-206ENST00000439518 ALDH1A3P47895 512 aa21.92■■□□□ 1.1
NCKIPSD-206ENST00000439518 TFAMQ00059 246 aaKnown RBP21.92■■□□□ 1.1
NCKIPSD-206ENST00000439518 SV2CQ496J9 727 aa21.92■■□□□ 1.1
NCKIPSD-206ENST00000439518 WSCD1Q658N2 575 aa21.92■■□□□ 1.1
NCKIPSD-206ENST00000439518 METTL23Q86XA0 190 aa21.92■■□□□ 1.1
NCKIPSD-206ENST00000439518 C1orf127Q8N9H9 656 aa21.92■■□□□ 1.1
NCKIPSD-206ENST00000439518 IQUBQ8NA54 791 aa21.92■■□□□ 1.1
NCKIPSD-206ENST00000439518 CXorf38Q8TB03 319 aa21.92■■□□□ 1.1
NCKIPSD-206ENST00000439518 DHX58Q96C10 678 aa21.92■■□□□ 1.1
NCKIPSD-206ENST00000439518 ASB3Q9Y575 518 aa21.92■■□□□ 1.1
NCKIPSD-206ENST00000439518 MYO15AQ9UKN7 3530 aa21.92■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms