RNA–Protein interactions for RNA: ENST00000439160.6

TCOF1-205, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,644 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-205ENST00000439160 REPS2Q8NFH8 660 aa12.94□□□□□ -0.34
TCOF1-205ENST00000439160 ETNPPLQ8TBG4 499 aa12.94□□□□□ -0.34
TCOF1-205ENST00000439160 PRDM5Q9NQX1 630 aaPredicted RBP12.94□□□□□ -0.34
TCOF1-205ENST00000439160 DMGDHQ9UI17 866 aaKnown RBP12.94□□□□□ -0.34
TCOF1-205ENST00000439160 A0A0G2JND7 137 aa12.94□□□□□ -0.34
TCOF1-205ENST00000439160 ANKRD63C9JTQ0 380 aa12.94□□□□□ -0.34
TCOF1-205ENST00000439160 APOEP02649 317 aa12.94□□□□□ -0.34
TCOF1-205ENST00000439160 CYP2C19P33261 490 aa12.94□□□□□ -0.34
TCOF1-205ENST00000439160 RAP1GAPP47736 663 aa12.94□□□□□ -0.34
TCOF1-205ENST00000439160 SV2CQ496J9 727 aa12.94□□□□□ -0.34
TCOF1-205ENST00000439160 PAN2Q504Q3 1202 aaKnown RBP12.94□□□□□ -0.34
TCOF1-205ENST00000439160 KCNT1Q5JUK3 1230 aa12.94□□□□□ -0.34
TCOF1-205ENST00000439160 SLC13A5Q86YT5 568 aaPredicted RBP12.94□□□□□ -0.34
TCOF1-205ENST00000439160 PARD3BQ8TEW8 1205 aa12.94□□□□□ -0.34
TCOF1-205ENST00000439160 ATG4AQ8WYN0 398 aa12.94□□□□□ -0.34
TCOF1-205ENST00000439160 GCNAQ96QF7 691 aa12.94□□□□□ -0.34
TCOF1-205ENST00000439160 MED15Q96RN5 788 aa12.94□□□□□ -0.34
TCOF1-205ENST00000439160 SLC38A7Q9NVC3 462 aa12.94□□□□□ -0.34
TCOF1-205ENST00000439160 A0A1B0GUA9 196 aa12.94□□□□□ -0.34
TCOF1-205ENST00000439160 SPAG7O75391 227 aa12.94□□□□□ -0.34
TCOF1-205ENST00000439160 ZFXP17010 805 aaPredicted RBP12.94□□□□□ -0.34
TCOF1-205ENST00000439160 ARHGEF19Q8IW93 802 aa12.94□□□□□ -0.34
TCOF1-205ENST00000439160 SPIRE2Q8WWL2 714 aa12.94□□□□□ -0.34
TCOF1-205ENST00000439160 COPS5Q92905 334 aa12.94□□□□□ -0.34
TCOF1-205ENST00000439160 EXT2Q93063 718 aa12.94□□□□□ -0.34
TCOF1-205ENST00000439160 VPS39Q96JC1 886 aa12.94□□□□□ -0.34
TCOF1-205ENST00000439160 SLC13A1Q9BZW2 595 aa12.94□□□□□ -0.34
TCOF1-205ENST00000439160 PLEKHA5Q9HAU0 1116 aa12.94□□□□□ -0.34
TCOF1-205ENST00000439160 AIPL1Q9NZN9 384 aa12.94□□□□□ -0.34
TCOF1-205ENST00000439160 DFFAO00273 331 aa12.93□□□□□ -0.34
TCOF1-205ENST00000439160 ATP9BO43861 1147 aa12.93□□□□□ -0.34
TCOF1-205ENST00000439160 MAP3K6O95382 1288 aa12.93□□□□□ -0.34
TCOF1-205ENST00000439160 SPATA31C1P0DKV0 1188 aa12.93□□□□□ -0.34
TCOF1-205ENST00000439160 GZMAP12544 262 aa12.93□□□□□ -0.34
TCOF1-205ENST00000439160 OR1G1P47890 313 aa12.93□□□□□ -0.34
TCOF1-205ENST00000439160 FCGRTP55899 365 aa12.93□□□□□ -0.34
TCOF1-205ENST00000439160 KYNUQ16719 465 aa12.93□□□□□ -0.34
TCOF1-205ENST00000439160 TSNAXIP1Q2TAA8 658 aa12.93□□□□□ -0.34
TCOF1-205ENST00000439160 LRRC55Q6ZSA7 311 aa12.93□□□□□ -0.34
TCOF1-205ENST00000439160 EPAS1Q99814 870 aa12.93□□□□□ -0.34
TCOF1-205ENST00000439160 HSD17B14Q9BPX1 270 aa12.93□□□□□ -0.34
TCOF1-205ENST00000439160 UBN1Q9NPG3 1134 aa12.93□□□□□ -0.34
TCOF1-205ENST00000439160 KBTBD13C9JR72 458 aa12.93□□□□□ -0.34
TCOF1-205ENST00000439160 ZC3H11AO75152 810 aaKnown RBP eCLIP12.93□□□□□ -0.34
TCOF1-205ENST00000439160 ADCYAP1R1P41586 468 aa12.93□□□□□ -0.34
TCOF1-205ENST00000439160 MMEL1Q495T6 779 aa12.93□□□□□ -0.34
TCOF1-205ENST00000439160 PAPD7Q5XG87 772 aaKnown RBP12.93□□□□□ -0.34
TCOF1-205ENST00000439160 GOLGA8RI6L899 631 aa12.93□□□□□ -0.34
TCOF1-205ENST00000439160 EPHB6O15197 1021 aa12.93□□□□□ -0.34
TCOF1-205ENST00000439160 MAPTP10636 758 aaKnown RBP12.93□□□□□ -0.34
TCOF1-205ENST00000439160 ITIH2P19823 946 aa12.93□□□□□ -0.34
TCOF1-205ENST00000439160 GPD1P21695 349 aa12.93□□□□□ -0.34
TCOF1-205ENST00000439160 YY1P25490 414 aa12.93□□□□□ -0.34
TCOF1-205ENST00000439160 PCSK1P29120 753 aa12.93□□□□□ -0.34
TCOF1-205ENST00000439160 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.93□□□□□ -0.34
TCOF1-205ENST00000439160 UBIAD1Q9Y5Z9 338 aa12.93□□□□□ -0.34
TCOF1-205ENST00000439160 STRNO43815 780 aa12.93□□□□□ -0.34
TCOF1-205ENST00000439160 ADCY3O60266 1144 aa12.93□□□□□ -0.34
TCOF1-205ENST00000439160 HMBSP08397 361 aa12.93□□□□□ -0.34
TCOF1-205ENST00000439160 HSD17B4P51659 736 aa12.93□□□□□ -0.34
TCOF1-205ENST00000439160 DEUP1Q05D60 604 aa12.93□□□□□ -0.34
TCOF1-205ENST00000439160 LONRF1Q17RB8 773 aa12.93□□□□□ -0.34
TCOF1-205ENST00000439160 DCAF4L1Q3SXM0 396 aa12.93□□□□□ -0.34
TCOF1-205ENST00000439160 PPP1R13LQ8WUF5 828 aa12.93□□□□□ -0.34
TCOF1-205ENST00000439160 CLMNQ96JQ2 1002 aa12.93□□□□□ -0.34
TCOF1-205ENST00000439160 PDGFDQ9GZP0 370 aaPredicted RBP12.93□□□□□ -0.34
TCOF1-205ENST00000439160 NEU2Q9Y3R4 380 aa12.93□□□□□ -0.34
TCOF1-205ENST00000439160 CCDC78A2IDD5 438 aa12.92□□□□□ -0.34
TCOF1-205ENST00000439160 GMNCA6NCL1 334 aa12.92□□□□□ -0.34
TCOF1-205ENST00000439160 GOLGA8CPA6NN73 597 aa12.92□□□□□ -0.34
TCOF1-205ENST00000439160 HIBCHQ6NVY1 386 aaPredicted RBP12.92□□□□□ -0.34
TCOF1-205ENST00000439160 SLC7A14Q8TBB6 771 aa12.92□□□□□ -0.34
TCOF1-205ENST00000439160 KAT5Q92993 513 aa12.92□□□□□ -0.34
TCOF1-205ENST00000439160 ATXN7L3BQ96GX2 97 aa12.92□□□□□ -0.34
TCOF1-205ENST00000439160 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.92□□□□□ -0.34
TCOF1-205ENST00000439160 HPCAL4Q9UM19 191 aa12.92□□□□□ -0.34
TCOF1-205ENST00000439160 AFDNP55196 1824 aaKnown RBP12.92□□□□□ -0.34
TCOF1-205ENST00000439160 KRT10P13645 584 aa12.92□□□□□ -0.34
TCOF1-205ENST00000439160 DLG4P78352 724 aa12.92□□□□□ -0.34
TCOF1-205ENST00000439160 NR1H3Q13133 447 aa12.92□□□□□ -0.34
TCOF1-205ENST00000439160 RAB44Q7Z6P3 723 aaPredicted RBP12.92□□□□□ -0.34
TCOF1-205ENST00000439160 SIK3Q9Y2K2 1263 aa12.92□□□□□ -0.34
TCOF1-205ENST00000439160 ROBO3Q96MS0 1386 aa12.92□□□□□ -0.34
TCOF1-205ENST00000439160 A0A0U1RQJ8 604 aa12.92□□□□□ -0.34
TCOF1-205ENST00000439160 PPP1R12AO14974 1030 aaPredicted RBP12.92□□□□□ -0.34
TCOF1-205ENST00000439160 ZBTB24O43167 697 aaPredicted RBP12.92□□□□□ -0.34
TCOF1-205ENST00000439160 PPP3CAQ08209 521 aa12.92□□□□□ -0.34
TCOF1-205ENST00000439160 BIRC2Q13490 618 aa12.92□□□□□ -0.34
TCOF1-205ENST00000439160 E2F5Q15329 346 aa12.92□□□□□ -0.34
TCOF1-205ENST00000439160 TAF1BQ53T94 588 aaPredicted RBP12.92□□□□□ -0.34
TCOF1-205ENST00000439160 EMC1Q8N766 993 aa12.92□□□□□ -0.34
TCOF1-205ENST00000439160 LRRN4CLQ8ND94 238 aa12.92□□□□□ -0.34
TCOF1-205ENST00000439160 OR6P1Q8NGX9 317 aa12.92□□□□□ -0.34
TCOF1-205ENST00000439160 ABHD16BQ9H3Z7 469 aa12.92□□□□□ -0.34
TCOF1-205ENST00000439160 SP110Q9HB58 689 aa12.92□□□□□ -0.34
TCOF1-205ENST00000439160 WDR70Q9NW82 654 aa12.92□□□□□ -0.34
TCOF1-205ENST00000439160 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.92□□□□□ -0.34
TCOF1-205ENST00000439160 ANGPTL3Q9Y5C1 460 aa12.92□□□□□ -0.34
TCOF1-205ENST00000439160 DDX3XO00571 662 aaKnown RBP eCLIP12.92□□□□□ -0.349e-17■■□□□ 11.8
TCOF1-205ENST00000439160 COILP38432 576 aaPredicted RBP12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms