RNA–Protein interactions for RNA: ENST00000438964.6

ACTN1-204, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 3,043 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-204ENST00000438964 SMARCA1P28370 1054 aa14.13□□□□□ -0.15
ACTN1-204ENST00000438964 SHMT1P34896 483 aa14.13□□□□□ -0.15
ACTN1-204ENST00000438964 INHBCP55103 352 aa14.13□□□□□ -0.15
ACTN1-204ENST00000438964 SOX10P56693 466 aa14.13□□□□□ -0.15
ACTN1-204ENST00000438964 DDB1Q16531 1140 aa14.13□□□□□ -0.15
ACTN1-204ENST00000438964 SLFN13Q68D06 897 aa14.13□□□□□ -0.15
ACTN1-204ENST00000438964 C12orf50Q8NA57 414 aaPredicted RBP14.13□□□□□ -0.15
ACTN1-204ENST00000438964 PYDC1Q8WXC3 89 aa14.13□□□□□ -0.15
ACTN1-204ENST00000438964 GATA6Q92908 595 aa14.13□□□□□ -0.15
ACTN1-204ENST00000438964 CCDC124Q96CT7 223 aaKnown RBP14.13□□□□□ -0.15
ACTN1-204ENST00000438964 FAM111AQ96PZ2 611 aa14.13□□□□□ -0.15
ACTN1-204ENST00000438964 EBF3Q9H4W6 596 aa14.13□□□□□ -0.15
ACTN1-204ENST00000438964 TAF1LQ8IZX4 1826 aa14.13□□□□□ -0.15
ACTN1-204ENST00000438964 E7ENQ6 273 aa14.13□□□□□ -0.15
ACTN1-204ENST00000438964 HNRNPRO43390 633 aaKnown RBP14.13□□□□□ -0.15
ACTN1-204ENST00000438964 PGM3O95394 542 aa14.13□□□□□ -0.15
ACTN1-204ENST00000438964 TROVE2P10155 538 aaKnown RBP eCLIP14.13□□□□□ -0.15
ACTN1-204ENST00000438964 IRX4P78413 519 aa14.13□□□□□ -0.15
ACTN1-204ENST00000438964 RAPH1Q70E73 1250 aa14.13□□□□□ -0.15
ACTN1-204ENST00000438964 FAM81AQ8TBF8 368 aa14.13□□□□□ -0.15
ACTN1-204ENST00000438964 ANKFY1Q9P2R3 1169 aa14.13□□□□□ -0.15
ACTN1-204ENST00000438964 KIF13BQ9NQT8 1826 aa14.13□□□□□ -0.15
ACTN1-204ENST00000438964 GNPATO15228 680 aa14.12□□□□□ -0.15
ACTN1-204ENST00000438964 SORBS3O60504 671 aa14.12□□□□□ -0.15
ACTN1-204ENST00000438964 MSS51Q4VC12 460 aa14.12□□□□□ -0.15
ACTN1-204ENST00000438964 SYDE2Q5VT97 1194 aa14.12□□□□□ -0.15
ACTN1-204ENST00000438964 LPCAT4Q643R3 524 aa14.12□□□□□ -0.15
ACTN1-204ENST00000438964 DAW1Q8N136 415 aa14.12□□□□□ -0.15
ACTN1-204ENST00000438964 NSL1Q96IY1 281 aa14.12□□□□□ -0.15
ACTN1-204ENST00000438964 OSBPL8Q9BZF1 889 aa14.12□□□□□ -0.15
ACTN1-204ENST00000438964 GTF3C4Q9UKN8 822 aa14.12□□□□□ -0.15
ACTN1-204ENST00000438964 PACSIN3Q9UKS6 424 aa14.12□□□□□ -0.15
ACTN1-204ENST00000438964 MAGEA13PA6NCF6 341 aa14.12□□□□□ -0.15
ACTN1-204ENST00000438964 C2CD2LO14523 706 aa14.12□□□□□ -0.15
ACTN1-204ENST00000438964 SLC16A4O15374 487 aa14.12□□□□□ -0.15
ACTN1-204ENST00000438964 CYP1A2P05177 515 aa14.12□□□□□ -0.15
ACTN1-204ENST00000438964 ARL4CP56559 192 aa14.12□□□□□ -0.15
ACTN1-204ENST00000438964 CETN1Q12798 172 aa14.12□□□□□ -0.15
ACTN1-204ENST00000438964 CLUL1Q15846 466 aa14.12□□□□□ -0.15
ACTN1-204ENST00000438964 SLC45A4Q5BKX6 768 aa14.12□□□□□ -0.15
ACTN1-204ENST00000438964 OLFML2BQ68BL8 750 aa14.12□□□□□ -0.15
ACTN1-204ENST00000438964 CCDC174Q6PII3 467 aa14.12□□□□□ -0.15
ACTN1-204ENST00000438964 TRIM74Q86UV6 250 aa14.12□□□□□ -0.15
ACTN1-204ENST00000438964 TRIM73Q86UV7 250 aa14.12□□□□□ -0.15
ACTN1-204ENST00000438964 TREML1Q86YW5 311 aa14.12□□□□□ -0.15
ACTN1-204ENST00000438964 RIBC1Q8N443 379 aaPredicted RBP14.12□□□□□ -0.15
ACTN1-204ENST00000438964 DDX27Q96GQ7 796 aaKnown RBP14.12□□□□□ -0.15
ACTN1-204ENST00000438964 CFAP57Q96MR6 1250 aa14.12□□□□□ -0.15
ACTN1-204ENST00000438964 TSSK1BQ9BXA7 367 aa14.12□□□□□ -0.15
ACTN1-204ENST00000438964 HSPBP1Q9NZL4 362 aa14.12□□□□□ -0.15
ACTN1-204ENST00000438964 MYOCOSA0A1B0GUC4 107 aa14.12□□□□□ -0.15
ACTN1-204ENST00000438964 CCDC160A6NGH7 325 aa14.12□□□□□ -0.15
ACTN1-204ENST00000438964 ANKRD22Q5VYY1 191 aa14.12□□□□□ -0.15
ACTN1-204ENST00000438964 TXNRD3NBQ6F5E7 133 aa14.12□□□□□ -0.15
ACTN1-204ENST00000438964 SPOPLQ6IQ16 392 aa14.12□□□□□ -0.15
ACTN1-204ENST00000438964 PTCD3Q96EY7 689 aaKnown RBP14.12□□□□□ -0.15
ACTN1-204ENST00000438964 SYNCQ9H7C4 482 aa14.12□□□□□ -0.15
ACTN1-204ENST00000438964 MANSC1Q9H8J5 431 aa14.12□□□□□ -0.15
ACTN1-204ENST00000438964 GINM1Q9NU53 330 aa14.12□□□□□ -0.15
ACTN1-204ENST00000438964 DMAC2Q9NW81 257 aa14.12□□□□□ -0.15
ACTN1-204ENST00000438964 FCHO1O14526 889 aa14.11□□□□□ -0.15
ACTN1-204ENST00000438964 TYROBPO43914 113 aa14.11□□□□□ -0.15
ACTN1-204ENST00000438964 FAM155BO75949 473 aa14.11□□□□□ -0.15
ACTN1-204ENST00000438964 ALDH18A1P54886 795 aaKnown RBP14.11□□□□□ -0.15
ACTN1-204ENST00000438964 PEX6Q13608 980 aa14.11□□□□□ -0.15
ACTN1-204ENST00000438964 CCDC62Q6P9F0 684 aa14.11□□□□□ -0.15
ACTN1-204ENST00000438964 RIPOR1Q6ZS17 1223 aa14.11□□□□□ -0.15
ACTN1-204ENST00000438964 SATL1Q86VE3 508 aa14.11□□□□□ -0.15
ACTN1-204ENST00000438964 FAM71AQ8IYT1 594 aa14.11□□□□□ -0.15
ACTN1-204ENST00000438964 CCDC89Q8N998 374 aa14.11□□□□□ -0.15
ACTN1-204ENST00000438964 FNBP1Q96RU3 617 aa14.11□□□□□ -0.15
ACTN1-204ENST00000438964 HSD17B14Q9BPX1 270 aa14.11□□□□□ -0.15
ACTN1-204ENST00000438964 LXNQ9BS40 222 aa14.11□□□□□ -0.15
ACTN1-204ENST00000438964 PPARGC1AQ9UBK2 798 aaKnown RBP14.11□□□□□ -0.15
ACTN1-204ENST00000438964 IRS2Q9Y4H2 1338 aa14.11□□□□□ -0.15
ACTN1-204ENST00000438964 ARHGEF35A5YM69 484 aa14.11□□□□□ -0.15
ACTN1-204ENST00000438964 SGK1O00141 431 aa14.11□□□□□ -0.15
ACTN1-204ENST00000438964 GAS7O60861 476 aa14.11□□□□□ -0.15
ACTN1-204ENST00000438964 ARP10275 920 aa14.11□□□□□ -0.15
ACTN1-204ENST00000438964 GPX6P59796 221 aa14.11□□□□□ -0.15
ACTN1-204ENST00000438964 AP1B1Q10567 949 aa14.11□□□□□ -0.15
ACTN1-204ENST00000438964 TPTE2Q6XPS3 522 aa14.11□□□□□ -0.15
ACTN1-204ENST00000438964 GRK7Q8WTQ7 553 aa14.11□□□□□ -0.15
ACTN1-204ENST00000438964 LRRN4Q8WUT4 740 aa14.11□□□□□ -0.15
ACTN1-204ENST00000438964 PLVAPQ9BX97 442 aa14.11□□□□□ -0.15
ACTN1-204ENST00000438964 TRIM55Q9BYV6 548 aa14.11□□□□□ -0.15
ACTN1-204ENST00000438964 PIK3CDO00329 1044 aa14.1□□□□□ -0.15
ACTN1-204ENST00000438964 GAP43P17677 238 aa14.1□□□□□ -0.15
ACTN1-204ENST00000438964 ADRA2BP18089 450 aa14.1□□□□□ -0.15
ACTN1-204ENST00000438964 MUTP22033 750 aa14.1□□□□□ -0.15
ACTN1-204ENST00000438964 HIRAP54198 1017 aaPredicted RBP14.1□□□□□ -0.15
ACTN1-204ENST00000438964 HADHBP55084 474 aaKnown RBP14.1□□□□□ -0.15
ACTN1-204ENST00000438964 BBS9Q3SYG4 887 aa14.1□□□□□ -0.15
ACTN1-204ENST00000438964 GPATCH4Q5T3I0 446 aaKnown RBP14.1□□□□□ -0.15
ACTN1-204ENST00000438964 OTOP1Q7RTM1 612 aa14.1□□□□□ -0.15
ACTN1-204ENST00000438964 POU5F2Q8N7G0 328 aa14.1□□□□□ -0.15
ACTN1-204ENST00000438964 RBM15BQ8NDT2 890 aaKnown RBP14.1□□□□□ -0.15
ACTN1-204ENST00000438964 GSTCDQ8NEC7 633 aa14.1□□□□□ -0.15
ACTN1-204ENST00000438964 CYLDQ9NQC7 956 aa14.1□□□□□ -0.15
ACTN1-204ENST00000438964 DDX18Q9NVP1 670 aaKnown RBP14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms