RNA–Protein interactions for RNA: ENST00000437983.2

SMAD9-IT1-201, SMAD9 intronic transcript 1, humanhuman

TSL 3 BASIC

Gene SMAD9-IT1, Length 504 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-IT1-201ENST00000437983 TMC8Q8IU68 726 aa13.57□□□□□ -0.24
SMAD9-IT1-201ENST00000437983 RPLP0P6Q8NHW5 317 aa13.57□□□□□ -0.24
SMAD9-IT1-201ENST00000437983 CAMK1GQ96NX5 476 aa13.57□□□□□ -0.24
SMAD9-IT1-201ENST00000437983 GPR88Q9GZN0 384 aa13.57□□□□□ -0.24
SMAD9-IT1-201ENST00000437983 EVLQ9UI08 416 aaPredicted RBP13.57□□□□□ -0.24
SMAD9-IT1-201ENST00000437983 GON4LQ3T8J9 2241 aa13.56□□□□□ -0.24
SMAD9-IT1-201ENST00000437983 SHROOM3Q8TF72 1996 aa13.56□□□□□ -0.24
SMAD9-IT1-201ENST00000437983 UPK3BL1B0FP48 263 aa13.56□□□□□ -0.24
SMAD9-IT1-201ENST00000437983 UPK3BL2E5RIL1 263 aa13.56□□□□□ -0.24
SMAD9-IT1-201ENST00000437983 TRDMT1O14717 391 aaKnown RBP13.56□□□□□ -0.24
SMAD9-IT1-201ENST00000437983 PRAMEF12O95522 483 aa13.56□□□□□ -0.24
SMAD9-IT1-201ENST00000437983 DMC1Q14565 340 aa13.56□□□□□ -0.24
SMAD9-IT1-201ENST00000437983 Q4G0T1 1027 aa13.56□□□□□ -0.24
SMAD9-IT1-201ENST00000437983 SYNE3Q6ZMZ3 975 aa13.56□□□□□ -0.24
SMAD9-IT1-201ENST00000437983 ARMCX6Q7L4S7 300 aa13.56□□□□□ -0.24
SMAD9-IT1-201ENST00000437983 PACS2Q86VP3 889 aa13.56□□□□□ -0.24
SMAD9-IT1-201ENST00000437983 DAGLBQ8NCG7 672 aa13.56□□□□□ -0.24
SMAD9-IT1-201ENST00000437983 EZH1Q92800 747 aaPredicted RBP13.56□□□□□ -0.24
SMAD9-IT1-201ENST00000437983 UBL7Q96S82 380 aaPredicted RBP13.56□□□□□ -0.24
SMAD9-IT1-201ENST00000437983 MTRQ99707 1265 aa13.56□□□□□ -0.24
SMAD9-IT1-201ENST00000437983 NUSAP1Q9BXS6 441 aaKnown RBP13.56□□□□□ -0.24
SMAD9-IT1-201ENST00000437983 SMG9Q9H0W8 520 aaKnown RBP13.56□□□□□ -0.24
SMAD9-IT1-201ENST00000437983 FBXL5Q9UKA1 691 aa13.56□□□□□ -0.24
SMAD9-IT1-201ENST00000437983 USP20Q9Y2K6 914 aa13.56□□□□□ -0.24
SMAD9-IT1-201ENST00000437983 CHMLP26374 656 aa13.55□□□□□ -0.24
SMAD9-IT1-201ENST00000437983 GALK1P51570 392 aa13.55□□□□□ -0.24
SMAD9-IT1-201ENST00000437983 USP11P51784 963 aa13.55□□□□□ -0.24
SMAD9-IT1-201ENST00000437983 MXD4Q14582 209 aaPredicted RBP13.55□□□□□ -0.24
SMAD9-IT1-201ENST00000437983 UPP1Q16831 310 aa13.55□□□□□ -0.24
SMAD9-IT1-201ENST00000437983 XKR9Q5GH70 373 aa13.55□□□□□ -0.24
SMAD9-IT1-201ENST00000437983 TRIM68Q6AZZ1 485 aa13.55□□□□□ -0.24
SMAD9-IT1-201ENST00000437983 SYT13Q7L8C5 426 aa13.55□□□□□ -0.24
SMAD9-IT1-201ENST00000437983 NOSTRINQ8IVI9 506 aa13.55□□□□□ -0.24
SMAD9-IT1-201ENST00000437983 EXOC8Q8IYI6 725 aa13.55□□□□□ -0.24
SMAD9-IT1-201ENST00000437983 ZNF843Q8N446 348 aa13.55□□□□□ -0.24
SMAD9-IT1-201ENST00000437983 LEMD2Q8NC56 503 aa13.55□□□□□ -0.24
SMAD9-IT1-201ENST00000437983 OR2I1PQ8NGU4 316 aa13.55□□□□□ -0.24
SMAD9-IT1-201ENST00000437983 ETNPPLQ8TBG4 499 aa13.55□□□□□ -0.24
SMAD9-IT1-201ENST00000437983 HNRNPABQ99729 332 aaKnown RBP13.55□□□□□ -0.24
SMAD9-IT1-201ENST00000437983 HPS4Q9NQG7 708 aa13.55□□□□□ -0.24
SMAD9-IT1-201ENST00000437983 GKN1Q9NS71 199 aa13.55□□□□□ -0.24
SMAD9-IT1-201ENST00000437983 DACH1Q9UI36 760 aa13.55□□□□□ -0.24
SMAD9-IT1-201ENST00000437983 ATXN2Q99700 1313 aaKnown RBP13.55□□□□□ -0.24
SMAD9-IT1-201ENST00000437983 CD59P13987 128 aa13.54□□□□□ -0.24
SMAD9-IT1-201ENST00000437983 GSPT1P15170 499 aaKnown RBP13.54□□□□□ -0.24
SMAD9-IT1-201ENST00000437983 GLRA2P23416 452 aa13.54□□□□□ -0.24
SMAD9-IT1-201ENST00000437983 YWHABP31946 246 aaKnown RBP13.54□□□□□ -0.24
SMAD9-IT1-201ENST00000437983 PTGER3P43115 390 aa13.54□□□□□ -0.24
SMAD9-IT1-201ENST00000437983 TFDP1Q14186 410 aa13.54□□□□□ -0.24
SMAD9-IT1-201ENST00000437983 MRPL58Q14197 206 aaKnown RBP13.54□□□□□ -0.24
SMAD9-IT1-201ENST00000437983 USP39Q53GS9 565 aaKnown RBP13.54□□□□□ -0.24
SMAD9-IT1-201ENST00000437983 RNF19BQ6ZMZ0 732 aa13.54□□□□□ -0.24
SMAD9-IT1-201ENST00000437983 GAREM2Q75VX8 874 aa13.54□□□□□ -0.24
SMAD9-IT1-201ENST00000437983 MARCH9Q86YJ5 346 aa13.54□□□□□ -0.24
SMAD9-IT1-201ENST00000437983 SMC5Q8IY18 1101 aa13.54□□□□□ -0.24
SMAD9-IT1-201ENST00000437983 FRMD1Q8N878 549 aa13.54□□□□□ -0.24
SMAD9-IT1-201ENST00000437983 BPIFB1Q8TDL5 484 aa13.54□□□□□ -0.24
SMAD9-IT1-201ENST00000437983 ADAMTS14Q8WXS8 1223 aa13.54□□□□□ -0.24
SMAD9-IT1-201ENST00000437983 TCEANC2Q96MN5 208 aa13.54□□□□□ -0.24
SMAD9-IT1-201ENST00000437983 PPP1R10Q96QC0 940 aaKnown RBP13.54□□□□□ -0.24
SMAD9-IT1-201ENST00000437983 POLR3CQ9BUI4 534 aaPredicted RBP13.54□□□□□ -0.24
SMAD9-IT1-201ENST00000437983 GTPBP2Q9BX10 602 aaKnown RBP13.54□□□□□ -0.24
SMAD9-IT1-201ENST00000437983 DNAJC25Q9H1X3 360 aa13.54□□□□□ -0.24
SMAD9-IT1-201ENST00000437983 RGL1Q9NZL6 768 aa13.54□□□□□ -0.24
SMAD9-IT1-201ENST00000437983 GDAQ9Y2T3 454 aa13.54□□□□□ -0.24
SMAD9-IT1-201ENST00000437983 ADAMTS9Q9P2N4 1935 aa13.54□□□□□ -0.24
SMAD9-IT1-201ENST00000437983 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.53□□□□□ -0.24
SMAD9-IT1-201ENST00000437983 ANTXRLA6NF34 631 aa13.53□□□□□ -0.24
SMAD9-IT1-201ENST00000437983 GOLGA8AA7E2F4 631 aa13.53□□□□□ -0.24
SMAD9-IT1-201ENST00000437983 GOLGA8BA8MQT2 603 aa13.53□□□□□ -0.24
SMAD9-IT1-201ENST00000437983 SGSM2O43147 1006 aa13.53□□□□□ -0.24
SMAD9-IT1-201ENST00000437983 ZBTB43O43298 467 aa13.53□□□□□ -0.24
SMAD9-IT1-201ENST00000437983 TRAPPC3O43617 180 aa13.53□□□□□ -0.24
SMAD9-IT1-201ENST00000437983 VNN2O95498 520 aa13.53□□□□□ -0.24
SMAD9-IT1-201ENST00000437983 FTH1P19P0C7X4 201 aa13.53□□□□□ -0.24
SMAD9-IT1-201ENST00000437983 NDUFV2P19404 249 aa13.53□□□□□ -0.24
SMAD9-IT1-201ENST00000437983 GNA11P29992 359 aa13.53□□□□□ -0.24
SMAD9-IT1-201ENST00000437983 ADD1P35611 737 aaKnown RBP13.53□□□□□ -0.24
SMAD9-IT1-201ENST00000437983 NUCB1Q02818 461 aa13.53□□□□□ -0.24
SMAD9-IT1-201ENST00000437983 POU5F1BQ06416 359 aa13.53□□□□□ -0.24
SMAD9-IT1-201ENST00000437983 SOX4Q06945 474 aaPredicted RBP13.53□□□□□ -0.24
SMAD9-IT1-201ENST00000437983 QPCTQ16769 361 aa13.53□□□□□ -0.24
SMAD9-IT1-201ENST00000437983 GPR158Q5T848 1215 aa13.53□□□□□ -0.24
SMAD9-IT1-201ENST00000437983 TPGS2Q68CL5 300 aa13.53□□□□□ -0.24
SMAD9-IT1-201ENST00000437983 TMEFF1Q8IYR6 380 aa13.53□□□□□ -0.24
SMAD9-IT1-201ENST00000437983 HDDC3Q8N4P3 179 aa13.53□□□□□ -0.24
SMAD9-IT1-201ENST00000437983 TBCKQ8TEA7 893 aa13.53□□□□□ -0.24
SMAD9-IT1-201ENST00000437983 RLN3Q8WXF3 142 aa13.53□□□□□ -0.24
SMAD9-IT1-201ENST00000437983 CRISPLD1Q9H336 500 aa13.53□□□□□ -0.24
SMAD9-IT1-201ENST00000437983 EBF3Q9H4W6 596 aa13.53□□□□□ -0.24
SMAD9-IT1-201ENST00000437983 PDZD7Q9H5P4 517 aa13.53□□□□□ -0.24
SMAD9-IT1-201ENST00000437983 OBP2AQ9NY56 170 aa13.53□□□□□ -0.24
SMAD9-IT1-201ENST00000437983 AFF4Q9UHB7 1163 aaKnown RBP13.53□□□□□ -0.24
SMAD9-IT1-201ENST00000437983 VAV3Q9UKW4 847 aa13.53□□□□□ -0.24
SMAD9-IT1-201ENST00000437983 YIPF1Q9Y548 306 aa13.53□□□□□ -0.24
SMAD9-IT1-201ENST00000437983 PPME1Q9Y570 386 aa13.53□□□□□ -0.24
SMAD9-IT1-201ENST00000437983 PI4KAP42356 2102 aa13.52□□□□□ -0.24
SMAD9-IT1-201ENST00000437983 SPTA1P02549 2419 aa13.52□□□□□ -0.24
SMAD9-IT1-201ENST00000437983 J3QKU1 62 aa13.52□□□□□ -0.25
SMAD9-IT1-201ENST00000437983 TK2O00142 265 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms